RNA–Protein interactions for RNA: ENST00000393091.6

USP44-202, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 3,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-202ENST00000393091 TOM1L2Q6ZVM7 507 aa17.73■□□□□ 0.43
USP44-202ENST00000393091 IL2RBP14784 551 aa17.73■□□□□ 0.43
USP44-202ENST00000393091 DOT1LQ8TEK3 1739 aa17.72■□□□□ 0.43
USP44-202ENST00000393091 NKX1-1Q15270 411 aaPredicted RBP17.72■□□□□ 0.43
USP44-202ENST00000393091 AMOTQ4VCS5 1084 aa17.72■□□□□ 0.43
USP44-202ENST00000393091 NGEFQ8N5V2 710 aa17.72■□□□□ 0.43
USP44-202ENST00000393091 UBR2Q8IWV8 1755 aa17.72■□□□□ 0.43
USP44-202ENST00000393091 TNS1Q9HBL0 1735 aaKnown RBP17.71■□□□□ 0.43
USP44-202ENST00000393091 PPM1GO15355 546 aaPredicted RBP17.71■□□□□ 0.43
USP44-202ENST00000393091 KDM3BQ7LBC6 1761 aa17.7■□□□□ 0.42
USP44-202ENST00000393091 HTATSF1O43719 755 aaKnown RBP17.69■□□□□ 0.42
USP44-202ENST00000393091 MRS2Q9HD23 443 aa17.69■□□□□ 0.42
USP44-202ENST00000393091 STRN4Q9NRL3 753 aa17.69■□□□□ 0.42
USP44-202ENST00000393091 NLRP2Q9NX02 1062 aa17.69■□□□□ 0.42
USP44-202ENST00000393091 POTEAQ6S8J7 498 aa17.69■□□□□ 0.42
USP44-202ENST00000393091 CSB-PGBD3P0DP91 1061 aa17.68■□□□□ 0.42
USP44-202ENST00000393091 SULT6B1Q6IMI4 303 aa17.68■□□□□ 0.42
USP44-202ENST00000393091 PHF23Q9BUL5 403 aaPredicted RBP17.68■□□□□ 0.42
USP44-202ENST00000393091 TATP17735 454 aaPredicted RBP17.67■□□□□ 0.42
USP44-202ENST00000393091 RUNDC1Q96C34 613 aa17.67■□□□□ 0.42
USP44-202ENST00000393091 ADAMTS8Q9UP79 889 aa17.67■□□□□ 0.42
USP44-202ENST00000393091 LY75O60449 1722 aa17.67■□□□□ 0.42
USP44-202ENST00000393091 PCDH11XQ9BZA7 1347 aa17.67■□□□□ 0.42
USP44-202ENST00000393091 PCDH11YQ9BZA8 1340 aa17.67■□□□□ 0.42
USP44-202ENST00000393091 RXRBP28702 533 aa17.67■□□□□ 0.42
USP44-202ENST00000393091 CCDC27Q2M243 656 aa17.67■□□□□ 0.42
USP44-202ENST00000393091 AEBP1Q8IUX7 1158 aa17.67■□□□□ 0.42
USP44-202ENST00000393091 ZBTB7CA1YPR0 619 aa17.66■□□□□ 0.42
USP44-202ENST00000393091 CEMIPQ8WUJ3 1361 aa17.66■□□□□ 0.42
USP44-202ENST00000393091 WDR43Q15061 677 aaKnown RBP eCLIP17.66■□□□□ 0.42
USP44-202ENST00000393091 SPG7Q9UQ90 795 aa17.65■□□□□ 0.42
USP44-202ENST00000393091 U2AF1L5P0DN76 240 aaPredicted RBP17.65■□□□□ 0.42
USP44-202ENST00000393091 U2AF1Q01081 240 aaKnown RBP eCLIP17.65■□□□□ 0.42
USP44-202ENST00000393091 PLEKHO1Q53GL0 409 aaPredicted RBP17.65■□□□□ 0.42
USP44-202ENST00000393091 RAPGEF4Q8WZA2 1011 aa17.65■□□□□ 0.42
USP44-202ENST00000393091 LTV1Q96GA3 475 aaPredicted RBP17.65■□□□□ 0.42
USP44-202ENST00000393091 GAS2L2Q8NHY3 880 aa17.64■□□□□ 0.41
USP44-202ENST00000393091 ZCRB1Q8TBF4 217 aaKnown RBP17.63■□□□□ 0.41
USP44-202ENST00000393091 PLEKHG5O94827 1062 aa17.63■□□□□ 0.41
USP44-202ENST00000393091 KDM6AO15550 1401 aaPredicted RBP17.63■□□□□ 0.41
USP44-202ENST00000393091 PRKAR2BP31323 418 aa17.63■□□□□ 0.41
USP44-202ENST00000393091 AKAP4Q5JQC9 854 aa17.63■□□□□ 0.41
USP44-202ENST00000393091 BTAF1O14981 1849 aa17.62■□□□□ 0.41
USP44-202ENST00000393091 MAP3K5Q99683 1374 aa17.62■□□□□ 0.41
USP44-202ENST00000393091 U2SURPO15042 1029 aaKnown RBP17.62■□□□□ 0.41
USP44-202ENST00000393091 USHBP1Q8N6Y0 703 aa17.62■□□□□ 0.41
USP44-202ENST00000393091 NFE2L2Q16236 605 aa17.61■□□□□ 0.41
USP44-202ENST00000393091 PHKG2P15735 406 aa17.61■□□□□ 0.41
USP44-202ENST00000393091 HSP90AB1P08238 724 aaKnown RBP17.61■□□□□ 0.41
USP44-202ENST00000393091 RREB1Q92766 1687 aa17.6■□□□□ 0.41
USP44-202ENST00000393091 SEPT12Q8IYM1 358 aa17.6■□□□□ 0.41
USP44-202ENST00000393091 PHACTR3Q96KR7 559 aa17.6■□□□□ 0.41
USP44-202ENST00000393091 EXOC5O00471 708 aa17.6■□□□□ 0.41
USP44-202ENST00000393091 FAM98CQ17RN3 349 aaKnown RBP17.6■□□□□ 0.41
USP44-202ENST00000393091 MTHFSDQ2M296 383 aaKnown RBP17.6■□□□□ 0.41
USP44-202ENST00000393091 CYP27B1O15528 508 aa17.59■□□□□ 0.41
USP44-202ENST00000393091 HMOX1P09601 288 aa17.59■□□□□ 0.41
USP44-202ENST00000393091 DDB1Q16531 1140 aa17.59■□□□□ 0.41
USP44-202ENST00000393091 IFNL2Q8IZJ0 200 aa17.59■□□□□ 0.41
USP44-202ENST00000393091 ZNF521Q96K83 1311 aa17.59■□□□□ 0.41
USP44-202ENST00000393091 BABAM1Q9NWV8 329 aa17.59■□□□□ 0.41
USP44-202ENST00000393091 LAMB4A4D0S4 1761 aa17.58■□□□□ 0.41
USP44-202ENST00000393091 CNGB1Q14028 1251 aaPredicted RBP17.58■□□□□ 0.4
USP44-202ENST00000393091 TMPOP42166 694 aaKnown RBP17.57■□□□□ 0.4
USP44-202ENST00000393091 MARCH10Q8NA82 808 aaPredicted RBP17.57■□□□□ 0.4
USP44-202ENST00000393091 DCAF5Q96JK2 942 aa17.57■□□□□ 0.4
USP44-202ENST00000393091 COL5A3P25940 1745 aaPredicted RBP17.57■□□□□ 0.4
USP44-202ENST00000393091 QSER1Q2KHR3 1735 aa17.57■□□□□ 0.4
USP44-202ENST00000393091 ERVV-2B6SEH9 535 aa17.56■□□□□ 0.4
USP44-202ENST00000393091 LMOD3Q0VAK6 560 aa17.56■□□□□ 0.4
USP44-202ENST00000393091 IL16Q14005 1332 aa17.56■□□□□ 0.4
USP44-202ENST00000393091 C5P01031 1676 aa17.55■□□□□ 0.4
USP44-202ENST00000393091 GNAT3A8MTJ3 354 aa17.55■□□□□ 0.4
USP44-202ENST00000393091 TAF1LQ8IZX4 1826 aa17.55■□□□□ 0.4
USP44-202ENST00000393091 MAPK8IP3Q9UPT6 1336 aa17.54■□□□□ 0.4
USP44-202ENST00000393091 TRIM35Q9UPQ4 493 aa17.54■□□□□ 0.4
USP44-202ENST00000393091 TJP1Q07157 1748 aa17.54■□□□□ 0.4
USP44-202ENST00000393091 KRT27Q7Z3Y8 459 aa17.54■□□□□ 0.4
USP44-202ENST00000393091 CCDC9Q9Y3X0 531 aaKnown RBP17.54■□□□□ 0.4
USP44-202ENST00000393091 KCPQ6ZWJ8 1503 aa17.53■□□□□ 0.4
USP44-202ENST00000393091 NEFMP07197 916 aa17.52■□□□□ 0.4
USP44-202ENST00000393091 ZNF530Q6P9A1 599 aaPredicted RBP17.52■□□□□ 0.4
USP44-202ENST00000393091 RNMTO43148 476 aaKnown RBP17.52■□□□□ 0.39
USP44-202ENST00000393091 FAM196AQ6ZSG2 479 aa17.52■□□□□ 0.39
USP44-202ENST00000393091 C1orf141Q5JVX7 400 aa17.5■□□□□ 0.39
USP44-202ENST00000393091 WDR63Q8IWG1 891 aa17.5■□□□□ 0.39
USP44-202ENST00000393091 USP35Q9P2H5 1018 aa17.5■□□□□ 0.39
USP44-202ENST00000393091 HEG1Q9ULI3 1381 aa17.49■□□□□ 0.39
USP44-202ENST00000393091 ZNF853P0CG23 659 aa17.49■□□□□ 0.39
USP44-202ENST00000393091 IL17REQ8NFR9 667 aa17.49■□□□□ 0.39
USP44-202ENST00000393091 PDE3BQ13370 1112 aa17.48■□□□□ 0.39
USP44-202ENST00000393091 NUP188Q5SRE5 1749 aa17.48■□□□□ 0.39
USP44-202ENST00000393091 APAF1O14727 1248 aa17.48■□□□□ 0.39
USP44-202ENST00000393091 CALD1Q05682 793 aaKnown RBP17.47■□□□□ 0.39
USP44-202ENST00000393091 CCDC125Q86Z20 511 aa17.47■□□□□ 0.39
USP44-202ENST00000393091 SLC52A2Q9HAB3 445 aa17.47■□□□□ 0.39
USP44-202ENST00000393091 RIPK4P57078 832 aa17.47■□□□□ 0.39
USP44-202ENST00000393091 BCL11BQ9C0K0 894 aaPredicted RBP17.47■□□□□ 0.39
USP44-202ENST00000393091 CACNA1FO60840 1977 aa17.47■□□□□ 0.39
USP44-202ENST00000393091 CCDC146Q8IYE0 955 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms