RNA–Protein interactions for RNA: ENST00000390990.1

RNU6-239P-201, Transcript of RNA, U6 small nuclear 239, pseudogene, humanhuman

BASIC

Gene RNU6-239P, Length 99 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-239P-201ENST00000390990 RAB15P59190 212 aa4.84□□□□□ -1.63
RNU6-239P-201ENST00000390990 SNRPNP63162 240 aaKnown RBP4.84□□□□□ -1.63
RNU6-239P-201ENST00000390990 ZBTB33Q86T24 672 aa4.84□□□□□ -1.63
RNU6-239P-201ENST00000390990 TRIM22Q8IYM9 498 aa4.84□□□□□ -1.63
RNU6-239P-201ENST00000390990 ZC3H15Q8WU90 426 aaKnown RBP4.84□□□□□ -1.63
RNU6-239P-201ENST00000390990 FKBPLQ9UIM3 349 aa4.84□□□□□ -1.63
RNU6-239P-201ENST00000390990 LRRN4Q8WUT4 740 aa4.83□□□□□ -1.64
RNU6-239P-201ENST00000390990 GTPBP3Q969Y2 492 aaKnown RBP4.83□□□□□ -1.64
RNU6-239P-201ENST00000390990 ERVH48-1M5A8F1 160 aa4.82□□□□□ -1.64
RNU6-239P-201ENST00000390990 RNF144AP50876 292 aaPredicted RBP4.82□□□□□ -1.64
RNU6-239P-201ENST00000390990 FOXR1Q6PIV2 292 aa4.82□□□□□ -1.64
RNU6-239P-201ENST00000390990 RIPOR1Q6ZS17 1223 aa4.82□□□□□ -1.64
RNU6-239P-201ENST00000390990 ADAM32Q8TC27 787 aa4.82□□□□□ -1.64
RNU6-239P-201ENST00000390990 GMCL1Q96IK5 515 aa4.82□□□□□ -1.64
RNU6-239P-201ENST00000390990 OIP5O43482 229 aa4.81□□□□□ -1.64
RNU6-239P-201ENST00000390990 COL8A1P27658 744 aa4.81□□□□□ -1.64
RNU6-239P-201ENST00000390990 NR6A1Q15406 480 aa4.81□□□□□ -1.64
RNU6-239P-201ENST00000390990 LRRC4BQ9NT99 713 aa4.81□□□□□ -1.64
RNU6-239P-201ENST00000390990 CLK2P49760 499 aaKnown RBP4.8□□□□□ -1.64
RNU6-239P-201ENST00000390990 PTK2Q05397 1052 aa4.8□□□□□ -1.64
RNU6-239P-201ENST00000390990 POLR3EQ9NVU0 708 aa4.8□□□□□ -1.64
RNU6-239P-201ENST00000390990 ESPNB1AK53 854 aa4.79□□□□□ -1.64
RNU6-239P-201ENST00000390990 SHISA8B8ZZ34 492 aa4.79□□□□□ -1.64
RNU6-239P-201ENST00000390990 MX2P20592 715 aa4.79□□□□□ -1.64
RNU6-239P-201ENST00000390990 POU4F2Q12837 409 aa4.79□□□□□ -1.64
RNU6-239P-201ENST00000390990 NBPF20Q3BBV1 942 aa4.79□□□□□ -1.64
RNU6-239P-201ENST00000390990 FBXO31Q5XUX0 539 aaPredicted RBP4.79□□□□□ -1.64
RNU6-239P-201ENST00000390990 C1orf229Q6ZS94 237 aaPredicted RBP4.79□□□□□ -1.64
RNU6-239P-201ENST00000390990 GAS2L1Q99501 681 aaPredicted RBP4.79□□□□□ -1.64
RNU6-239P-201ENST00000390990 CYLDQ9NQC7 956 aa4.79□□□□□ -1.64
RNU6-239P-201ENST00000390990 DYRK1BQ9Y463 629 aa4.79□□□□□ -1.64
RNU6-239P-201ENST00000390990 ZC3H4Q9UPT8 1303 aaKnown RBP4.78□□□□□ -1.64
RNU6-239P-201ENST00000390990 H7C1W4 665 aa4.78□□□□□ -1.64
RNU6-239P-201ENST00000390990 ITGB7P26010 798 aa4.78□□□□□ -1.64
RNU6-239P-201ENST00000390990 KRTAP1-3Q8IUG1 177 aa4.78□□□□□ -1.64
RNU6-239P-201ENST00000390990 AK7Q96M32 723 aa4.78□□□□□ -1.64
RNU6-239P-201ENST00000390990 TRERF1Q96PN7 1200 aa4.78□□□□□ -1.64
RNU6-239P-201ENST00000390990 OXCT2Q9BYC2 517 aaPredicted RBP4.78□□□□□ -1.64
RNU6-239P-201ENST00000390990 GPSM3Q9Y4H4 160 aa4.78□□□□□ -1.64
RNU6-239P-201ENST00000390990 MEN1O00255 615 aa4.77□□□□□ -1.65
RNU6-239P-201ENST00000390990 THBS1P07996 1170 aa4.77□□□□□ -1.65
RNU6-239P-201ENST00000390990 DZIP3Q86Y13 1208 aaKnown RBP4.77□□□□□ -1.65
RNU6-239P-201ENST00000390990 EPS8L1Q8TE68 723 aa4.77□□□□□ -1.65
RNU6-239P-201ENST00000390990 SUV39H2Q9H5I1 410 aa4.77□□□□□ -1.65
RNU6-239P-201ENST00000390990 MKL2Q9ULH7 1088 aa4.77□□□□□ -1.65
RNU6-239P-201ENST00000390990 A0A1W2PRU2 124 aa4.76□□□□□ -1.65
RNU6-239P-201ENST00000390990 ATP5J2-PTCD1G3V325 749 aa4.76□□□□□ -1.65
RNU6-239P-201ENST00000390990 HOXB4P17483 251 aaPredicted RBP4.76□□□□□ -1.65
RNU6-239P-201ENST00000390990 GPC1P35052 558 aa4.76□□□□□ -1.65
RNU6-239P-201ENST00000390990 PDE4DQ08499 809 aa4.76□□□□□ -1.65
RNU6-239P-201ENST00000390990 VSIG10Q8N0Z9 540 aa4.76□□□□□ -1.65
RNU6-239P-201ENST00000390990 NSFL1CQ9UNZ2 370 aaKnown RBP4.76□□□□□ -1.65
RNU6-239P-201ENST00000390990 C1QTNF9BB2RNN3 333 aa4.75□□□□□ -1.65
RNU6-239P-201ENST00000390990 MAP2K3P46734 347 aa4.75□□□□□ -1.65
RNU6-239P-201ENST00000390990 GRIN2CQ14957 1233 aa4.75□□□□□ -1.65
RNU6-239P-201ENST00000390990 NBPF10Q6P3W6 841 aaKnown RBP4.75□□□□□ -1.65
RNU6-239P-201ENST00000390990 LINC00114Q6XXX2 140 aa4.75□□□□□ -1.65
RNU6-239P-201ENST00000390990 ALYREFQ86V81 257 aaKnown RBP4.75□□□□□ -1.65
RNU6-239P-201ENST00000390990 NBPF15Q8N660 670 aa4.75□□□□□ -1.65
RNU6-239P-201ENST00000390990 KLRG1Q96E93 195 aa4.75□□□□□ -1.65
RNU6-239P-201ENST00000390990 GRIP2Q9C0E4 1043 aa4.75□□□□□ -1.65
RNU6-239P-201ENST00000390990 NUCKS1Q9H1E3 243 aaKnown RBP4.75□□□□□ -1.65
RNU6-239P-201ENST00000390990 RRAGCQ9HB90 399 aa4.75□□□□□ -1.65
RNU6-239P-201ENST00000390990 SLC27A3Q5K4L6 730 aa4.74□□□□□ -1.65
RNU6-239P-201ENST00000390990 PPP2R2DQ66LE6 453 aa4.74□□□□□ -1.65
RNU6-239P-201ENST00000390990 CD163Q86VB7 1156 aa4.74□□□□□ -1.65
RNU6-239P-201ENST00000390990 EDARADDQ8WWZ3 215 aa4.74□□□□□ -1.65
RNU6-239P-201ENST00000390990 RSPH6AQ9H0K4 717 aa4.74□□□□□ -1.65
RNU6-239P-201ENST00000390990 GIGYF1O75420 1035 aaPredicted RBP4.73□□□□□ -1.65
RNU6-239P-201ENST00000390990 F11P03951 625 aa4.73□□□□□ -1.65
RNU6-239P-201ENST00000390990 CFHR5Q9BXR6 569 aa4.73□□□□□ -1.65
RNU6-239P-201ENST00000390990 HMX1Q9NP08 348 aaPredicted RBP4.73□□□□□ -1.65
RNU6-239P-201ENST00000390990 TIMMDC1Q9NPL8 285 aa4.73□□□□□ -1.65
RNU6-239P-201ENST00000390990 SPATA31C2B4DYI2 1134 aa4.72□□□□□ -1.65
RNU6-239P-201ENST00000390990 CHRNA4P43681 627 aa4.72□□□□□ -1.65
RNU6-239P-201ENST00000390990 SEPT12Q8IYM1 358 aa4.72□□□□□ -1.65
RNU6-239P-201ENST00000390990 PROCA1Q8NCQ7 364 aaPredicted RBP4.72□□□□□ -1.65
RNU6-239P-201ENST00000390990 NLRP3Q96P20 1036 aa4.72□□□□□ -1.65
RNU6-239P-201ENST00000390990 C2CD2LO14523 706 aa4.71□□□□□ -1.66
RNU6-239P-201ENST00000390990 AP1G2O75843 785 aa4.71□□□□□ -1.66
RNU6-239P-201ENST00000390990 UBAP2LQ14157 1087 aaKnown RBP4.71□□□□□ -1.66
RNU6-239P-201ENST00000390990 DOC2BQ14184 412 aa4.71□□□□□ -1.66
RNU6-239P-201ENST00000390990 WDR44Q5JSH3 913 aa4.71□□□□□ -1.66
RNU6-239P-201ENST00000390990 SEMA6BQ9H3T3 888 aa4.71□□□□□ -1.66
RNU6-239P-201ENST00000390990 GDF2Q9UK05 429 aaPredicted RBP4.71□□□□□ -1.66
RNU6-239P-201ENST00000390990 WASLO00401 505 aaPredicted RBP4.7□□□□□ -1.66
RNU6-239P-201ENST00000390990 SCTRP47872 440 aa4.7□□□□□ -1.66
RNU6-239P-201ENST00000390990 ERVK-9P63128 1117 aa4.7□□□□□ -1.66
RNU6-239P-201ENST00000390990 CLN3Q13286 438 aa4.7□□□□□ -1.66
RNU6-239P-201ENST00000390990 LCE3BQ5TA77 95 aa4.7□□□□□ -1.66
RNU6-239P-201ENST00000390990 TAS1R3Q7RTX0 852 aa4.7□□□□□ -1.66
RNU6-239P-201ENST00000390990 KRTAP4-12Q9BQ66 201 aa4.7□□□□□ -1.66
RNU6-239P-201ENST00000390990 GPAMQ9HCL2 828 aa4.7□□□□□ -1.66
RNU6-239P-201ENST00000390990 SKIV2LQ15477 1246 aaKnown RBP4.69□□□□□ -1.66
RNU6-239P-201ENST00000390990 ZMYM1Q5SVZ6 1142 aa4.69□□□□□ -1.66
RNU6-239P-201ENST00000390990 CC2D2BQ6DHV5 1058 aa4.69□□□□□ -1.66
RNU6-239P-201ENST00000390990 GOLGA6L1Q8N7Z2 621 aa4.69□□□□□ -1.66
RNU6-239P-201ENST00000390990 BTBD6Q96KE9 485 aa4.69□□□□□ -1.66
RNU6-239P-201ENST00000390990 GNL3Q9BVP2 549 aaKnown RBP eCLIP4.69□□□□□ -1.66
RNU6-239P-201ENST00000390990 ARHGEF10LQ9HCE6 1279 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms