RNA–Protein interactions for RNA: ENST00000390462.1

TRAV35-201, Transcript of T cell receptor alpha variable 35, humanhuman

BASIC

Gene TRAV35, Length 330 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV35-201ENST00000390462 SYMPKQ92797 1274 aaKnown RBP8.98□□□□□ -0.97
TRAV35-201ENST00000390462 MRS2Q9HD23 443 aa8.98□□□□□ -0.97
TRAV35-201ENST00000390462 SEPT3Q9UH03 358 aa8.98□□□□□ -0.97
TRAV35-201ENST00000390462 FKBPLQ9UIM3 349 aa8.98□□□□□ -0.97
TRAV35-201ENST00000390462 BICRAQ9NZM4 1560 aa8.98□□□□□ -0.97
TRAV35-201ENST00000390462 IBSPP21815 317 aaPredicted RBP8.97□□□□□ -0.97
TRAV35-201ENST00000390462 PSEN2P49810 448 aa8.97□□□□□ -0.97
TRAV35-201ENST00000390462 MAP7D1Q3KQU3 841 aa8.97□□□□□ -0.97
TRAV35-201ENST00000390462 SOGA3Q5TF21 947 aa8.97□□□□□ -0.97
TRAV35-201ENST00000390462 SIX5Q8N196 739 aa8.97□□□□□ -0.97
TRAV35-201ENST00000390462 ACBD3Q9H3P7 528 aa8.97□□□□□ -0.97
TRAV35-201ENST00000390462 MYH16Q9H6N6 1097 aa8.97□□□□□ -0.97
TRAV35-201ENST00000390462 PARP2Q9UGN5 583 aa8.97□□□□□ -0.97
TRAV35-201ENST00000390462 TPD52L2O43399 206 aaKnown RBP8.96□□□□□ -0.98
TRAV35-201ENST00000390462 CLSTN1O94985 981 aa8.96□□□□□ -0.98
TRAV35-201ENST00000390462 SLC10A3P09131 477 aa8.96□□□□□ -0.98
TRAV35-201ENST00000390462 DNAJA1P31689 397 aaKnown RBP8.96□□□□□ -0.98
TRAV35-201ENST00000390462 SEC13P55735 322 aa8.96□□□□□ -0.98
TRAV35-201ENST00000390462 FGD1P98174 961 aa8.96□□□□□ -0.98
TRAV35-201ENST00000390462 MTMR3Q13615 1198 aa8.96□□□□□ -0.98
TRAV35-201ENST00000390462 TCEAL1Q15170 157 aa8.96□□□□□ -0.98
TRAV35-201ENST00000390462 SWT1Q5T5J6 900 aaKnown RBP8.96□□□□□ -0.98
TRAV35-201ENST00000390462 TMED8Q6PL24 325 aaPredicted RBP8.96□□□□□ -0.98
TRAV35-201ENST00000390462 TMC7Q7Z402 723 aa8.96□□□□□ -0.98
TRAV35-201ENST00000390462 TICAM2Q86XR7 235 aa8.96□□□□□ -0.98
TRAV35-201ENST00000390462 FAM161BQ96MY7 647 aa8.96□□□□□ -0.98
TRAV35-201ENST00000390462 RBCK1Q9BYM8 510 aa8.96□□□□□ -0.98
TRAV35-201ENST00000390462 SLC52A1Q9NWF4 448 aa8.96□□□□□ -0.98
TRAV35-201ENST00000390462 RABGEF1Q9UJ41 708 aa8.96□□□□□ -0.98
TRAV35-201ENST00000390462 CHIC2Q9UKJ5 165 aa8.96□□□□□ -0.98
TRAV35-201ENST00000390462 NOD1Q9Y239 953 aa8.96□□□□□ -0.98
TRAV35-201ENST00000390462 ZBTB7BO15156 539 aaPredicted RBP8.95□□□□□ -0.98
TRAV35-201ENST00000390462 DESI1Q6ICB0 168 aa8.95□□□□□ -0.98
TRAV35-201ENST00000390462 VTI1AQ96AJ9 217 aa8.95□□□□□ -0.98
TRAV35-201ENST00000390462 SLC4A5Q9BY07 1137 aa8.95□□□□□ -0.98
TRAV35-201ENST00000390462 BRINP2Q9C0B6 783 aa8.95□□□□□ -0.98
TRAV35-201ENST00000390462 KLHL42Q9P2K6 505 aa8.95□□□□□ -0.98
TRAV35-201ENST00000390462 ARHGAP33O14559 1287 aa8.94□□□□□ -0.98
TRAV35-201ENST00000390462 TREHO43280 583 aa8.94□□□□□ -0.98
TRAV35-201ENST00000390462 SORBS3O60504 671 aa8.94□□□□□ -0.98
TRAV35-201ENST00000390462 PRPF40AO75400 957 aaKnown RBP8.94□□□□□ -0.98
TRAV35-201ENST00000390462 ZNF76P36508 570 aa8.94□□□□□ -0.98
TRAV35-201ENST00000390462 TNNI2P48788 182 aa8.94□□□□□ -0.98
TRAV35-201ENST00000390462 MCCD1P59942 119 aaPredicted RBP8.94□□□□□ -0.98
TRAV35-201ENST00000390462 ANAPC15P60006 121 aa8.94□□□□□ -0.98
TRAV35-201ENST00000390462 FMR1Q06787 632 aaKnown RBP eCLIP8.94□□□□□ -0.98
TRAV35-201ENST00000390462 ZNF746Q6NUN9 644 aaPredicted RBP8.94□□□□□ -0.98
TRAV35-201ENST00000390462 PPP1R18Q6NYC8 613 aa8.94□□□□□ -0.98
TRAV35-201ENST00000390462 TRAF7Q6Q0C0 670 aa8.94□□□□□ -0.98
TRAV35-201ENST00000390462 TMC4Q7Z404 712 aa8.94□□□□□ -0.98
TRAV35-201ENST00000390462 KIAA1024Q9UPX6 916 aa8.94□□□□□ -0.98
TRAV35-201ENST00000390462 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.94□□□□□ -0.98
TRAV35-201ENST00000390462 RBM19Q9Y4C8 960 aaKnown RBP8.94□□□□□ -0.98
TRAV35-201ENST00000390462 LDHBP07195 334 aaKnown RBP8.93□□□□□ -0.98
TRAV35-201ENST00000390462 POTEEQ6S8J3 1075 aa8.93□□□□□ -0.98
TRAV35-201ENST00000390462 LYPD8Q6UX82 237 aa8.93□□□□□ -0.98
TRAV35-201ENST00000390462 RETREG3Q86VR2 466 aa8.93□□□□□ -0.98
TRAV35-201ENST00000390462 OTUD5Q96G74 571 aa8.93□□□□□ -0.98
TRAV35-201ENST00000390462 DUSP9Q99956 384 aaKnown RBP8.93□□□□□ -0.98
TRAV35-201ENST00000390462 SEPT9Q9UHD8 586 aaPredicted RBP8.93□□□□□ -0.98
TRAV35-201ENST00000390462 NOP58Q9Y2X3 529 aaKnown RBP8.93□□□□□ -0.98
TRAV35-201ENST00000390462 ARID5AQ03989 594 aa8.92□□□□□ -0.98
TRAV35-201ENST00000390462 PSME1Q06323 249 aa8.92□□□□□ -0.98
TRAV35-201ENST00000390462 VARS2Q5ST30 1063 aaKnown RBP8.92□□□□□ -0.98
TRAV35-201ENST00000390462 GORABQ5T7V8 394 aa8.92□□□□□ -0.98
TRAV35-201ENST00000390462 ZCRB1Q8TBF4 217 aaKnown RBP8.92□□□□□ -0.98
TRAV35-201ENST00000390462 MKNK1Q9BUB5 465 aa8.92□□□□□ -0.98
TRAV35-201ENST00000390462 OSBPL2Q9H1P3 480 aa8.92□□□□□ -0.98
TRAV35-201ENST00000390462 PRDM16Q9HAZ2 1276 aa8.92□□□□□ -0.98
TRAV35-201ENST00000390462 VTI1BQ9UEU0 232 aa8.92□□□□□ -0.98
TRAV35-201ENST00000390462 CC2D2AQ9P2K1 1620 aa8.91□□□□□ -0.98
TRAV35-201ENST00000390462 ERBB3P21860 1342 aa8.91□□□□□ -0.98
TRAV35-201ENST00000390462 SFI1A8K8P3 1242 aa8.91□□□□□ -0.98
TRAV35-201ENST00000390462 HSD3B2P26439 372 aa8.91□□□□□ -0.98
TRAV35-201ENST00000390462 DAB2P98082 770 aa8.91□□□□□ -0.98
TRAV35-201ENST00000390462 FUT2Q10981 343 aa8.91□□□□□ -0.98
TRAV35-201ENST00000390462 PTCD1O75127 700 aaKnown RBP8.9□□□□□ -0.98
TRAV35-201ENST00000390462 FAM13AO94988 1023 aa8.9□□□□□ -0.98
TRAV35-201ENST00000390462 HDGFP51858 240 aaKnown RBP8.9□□□□□ -0.98
TRAV35-201ENST00000390462 PSMD2Q13200 908 aa8.9□□□□□ -0.98
TRAV35-201ENST00000390462 FAM98CQ17RN3 349 aaKnown RBP8.9□□□□□ -0.98
TRAV35-201ENST00000390462 RNF187Q5TA31 235 aaPredicted RBP8.9□□□□□ -0.98
TRAV35-201ENST00000390462 DMRTA1Q5VZB9 504 aa8.9□□□□□ -0.98
TRAV35-201ENST00000390462 JAZF1Q86VZ6 243 aa8.9□□□□□ -0.98
TRAV35-201ENST00000390462 PCDHB9Q9Y5E1 797 aa8.9□□□□□ -0.98
TRAV35-201ENST00000390462 CECR2Q9BXF3 1484 aa8.89□□□□□ -0.99
TRAV35-201ENST00000390462 PARNO95453 639 aaKnown RBP8.89□□□□□ -0.99
TRAV35-201ENST00000390462 NPR3P17342 541 aa8.89□□□□□ -0.99
TRAV35-201ENST00000390462 PBX2P40425 430 aa8.89□□□□□ -0.99
TRAV35-201ENST00000390462 SLC4A3P48751 1232 aa8.89□□□□□ -0.99
TRAV35-201ENST00000390462 PLCB3Q01970 1234 aa8.89□□□□□ -0.99
TRAV35-201ENST00000390462 CCDC102BQ68D86 513 aa8.89□□□□□ -0.99
TRAV35-201ENST00000390462 CAPN12Q6ZSI9 719 aa8.89□□□□□ -0.99
TRAV35-201ENST00000390462 EXOC8Q8IYI6 725 aa8.89□□□□□ -0.99
TRAV35-201ENST00000390462 HINFPQ9BQA5 517 aa8.89□□□□□ -0.99
TRAV35-201ENST00000390462 RNF19AQ9NV58 838 aa8.89□□□□□ -0.99
TRAV35-201ENST00000390462 AXIN2Q9Y2T1 843 aa8.89□□□□□ -0.99
TRAV35-201ENST00000390462 NDUFB5O43674 189 aa8.88□□□□□ -0.99
TRAV35-201ENST00000390462 MAPK8P45983 427 aa8.88□□□□□ -0.99
TRAV35-201ENST00000390462 GTF2IP78347 998 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms