RNA–Protein interactions for RNA: ENST00000390436.2

TRAV13-1-201, Transcript of T cell receptor alpha variable 13-1, humanhuman

APPRIS P1 BASIC

Gene TRAV13-1, Length 360 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-1-201ENST00000390436 PARD3Q8TEW0 1356 aa9.71□□□□□ -0.86
TRAV13-1-201ENST00000390436 USP6P35125 1406 aa9.71□□□□□ -0.86
TRAV13-1-201ENST00000390436 NFAT5O94916 1531 aa9.71□□□□□ -0.86
TRAV13-1-201ENST00000390436 PSEN1P49768 467 aa9.7□□□□□ -0.86
TRAV13-1-201ENST00000390436 SPRYD3Q8NCJ5 442 aa9.7□□□□□ -0.86
TRAV13-1-201ENST00000390436 CFAP44Q96MT7 982 aa9.7□□□□□ -0.86
TRAV13-1-201ENST00000390436 OVOS2A0A0G2JMS6 1433 aa9.69□□□□□ -0.86
TRAV13-1-201ENST00000390436 OVOS2A0A0J9YW53 1432 aa9.69□□□□□ -0.86
TRAV13-1-201ENST00000390436 LTN1O94822 1766 aa9.69□□□□□ -0.86
TRAV13-1-201ENST00000390436 OVOS2Q6IE36 1432 aa9.69□□□□□ -0.86
TRAV13-1-201ENST00000390436 AATKQ6ZMQ8 1374 aa9.69□□□□□ -0.86
TRAV13-1-201ENST00000390436 TRPM1Q7Z4N2 1603 aa9.69□□□□□ -0.86
TRAV13-1-201ENST00000390436 SPON1Q9HCB6 807 aa9.69□□□□□ -0.86
TRAV13-1-201ENST00000390436 NHSQ6T4R5 1651 aa9.68□□□□□ -0.86
TRAV13-1-201ENST00000390436 HAX1O00165 279 aa9.68□□□□□ -0.86
TRAV13-1-201ENST00000390436 SOX12O15370 315 aa9.68□□□□□ -0.86
TRAV13-1-201ENST00000390436 COL24A1Q17RW2 1714 aa9.68□□□□□ -0.86
TRAV13-1-201ENST00000390436 MON2Q7Z3U7 1717 aa9.68□□□□□ -0.86
TRAV13-1-201ENST00000390436 CPSF1Q10570 1443 aaKnown RBP9.67□□□□□ -0.86
TRAV13-1-201ENST00000390436 PLSCR1O15162 318 aa9.67□□□□□ -0.86
TRAV13-1-201ENST00000390436 NLRP6P59044 892 aa9.67□□□□□ -0.86
TRAV13-1-201ENST00000390436 SRPK2P78362 688 aaKnown RBP9.67□□□□□ -0.86
TRAV13-1-201ENST00000390436 EVX2Q03828 476 aa9.67□□□□□ -0.86
TRAV13-1-201ENST00000390436 ARHGEF25Q86VW2 580 aa9.67□□□□□ -0.86
TRAV13-1-201ENST00000390436 NLRP13Q86W25 1043 aa9.67□□□□□ -0.86
TRAV13-1-201ENST00000390436 ZNF784Q8NCA9 323 aaPredicted RBP9.67□□□□□ -0.86
TRAV13-1-201ENST00000390436 MS4A3Q96HJ5 214 aa9.67□□□□□ -0.86
TRAV13-1-201ENST00000390436 SHANK3Q9BYB0 1731 aa9.67□□□□□ -0.86
TRAV13-1-201ENST00000390436 NINLQ9Y2I6 1382 aa9.66□□□□□ -0.86
TRAV13-1-201ENST00000390436 TXNRD1Q16881 649 aa9.66□□□□□ -0.86
TRAV13-1-201ENST00000390436 ZNF827Q17R98 1081 aa9.66□□□□□ -0.86
TRAV13-1-201ENST00000390436 NBPF14Q5TI25 921 aa9.66□□□□□ -0.86
TRAV13-1-201ENST00000390436 LRRC4BQ9NT99 713 aa9.66□□□□□ -0.86
TRAV13-1-201ENST00000390436 THRAP3Q9Y2W1 955 aaKnown RBP9.66□□□□□ -0.86
TRAV13-1-201ENST00000390436 CD163L1Q9NR16 1453 aa9.66□□□□□ -0.86
TRAV13-1-201ENST00000390436 TTC21BQ7Z4L5 1316 aa9.65□□□□□ -0.86
TRAV13-1-201ENST00000390436 WDR17Q8IZU2 1322 aa9.65□□□□□ -0.86
TRAV13-1-201ENST00000390436 CENPJQ9HC77 1338 aaPredicted RBP9.65□□□□□ -0.86
TRAV13-1-201ENST00000390436 KCNQ4P56696 695 aa9.65□□□□□ -0.86
TRAV13-1-201ENST00000390436 DDB1Q16531 1140 aa9.65□□□□□ -0.86
TRAV13-1-201ENST00000390436 TOM1L2Q6ZVM7 507 aa9.65□□□□□ -0.86
TRAV13-1-201ENST00000390436 ACSBG1Q96GR2 724 aa9.65□□□□□ -0.86
TRAV13-1-201ENST00000390436 SIN3AQ96ST3 1273 aa9.65□□□□□ -0.86
TRAV13-1-201ENST00000390436 FHDC1Q9C0D6 1143 aaPredicted RBP9.65□□□□□ -0.86
TRAV13-1-201ENST00000390436 USP54Q70EL1 1684 aa9.64□□□□□ -0.87
TRAV13-1-201ENST00000390436 GTPBP6O43824 516 aaPredicted RBP9.64□□□□□ -0.87
TRAV13-1-201ENST00000390436 SYT17Q9BSW7 474 aa9.64□□□□□ -0.87
TRAV13-1-201ENST00000390436 PPP1R1BQ9UD71 204 aaPredicted RBP9.64□□□□□ -0.87
TRAV13-1-201ENST00000390436 BCL9O00512 1426 aa9.64□□□□□ -0.87
TRAV13-1-201ENST00000390436 GOLGB1Q14789 3259 aaKnown RBP9.64□□□□□ -0.87
TRAV13-1-201ENST00000390436 FBLN1P23142 703 aa9.63□□□□□ -0.87
TRAV13-1-201ENST00000390436 SLC15A2Q16348 729 aa9.63□□□□□ -0.87
TRAV13-1-201ENST00000390436 L3MBTL2Q969R5 705 aa9.63□□□□□ -0.87
TRAV13-1-201ENST00000390436 TRPC6Q9Y210 931 aa9.63□□□□□ -0.87
TRAV13-1-201ENST00000390436 FAM208AQ9UK61 1670 aaKnown RBP9.62□□□□□ -0.87
TRAV13-1-201ENST00000390436 QSER1Q2KHR3 1735 aa9.62□□□□□ -0.87
TRAV13-1-201ENST00000390436 POTEHQ6S545 545 aa9.61□□□□□ -0.87
TRAV13-1-201ENST00000390436 NME9Q86XW9 330 aa9.61□□□□□ -0.87
TRAV13-1-201ENST00000390436 CARD10Q9BWT7 1032 aa9.61□□□□□ -0.87
TRAV13-1-201ENST00000390436 TNS2Q63HR2 1409 aa9.61□□□□□ -0.87
TRAV13-1-201ENST00000390436 LY75O60449 1722 aa9.61□□□□□ -0.87
TRAV13-1-201ENST00000390436 DOT1LQ8TEK3 1739 aa9.61□□□□□ -0.87
TRAV13-1-201ENST00000390436 ABCC6O95255 1503 aa9.61□□□□□ -0.87
TRAV13-1-201ENST00000390436 STAC3Q96MF2 364 aa9.6□□□□□ -0.87
TRAV13-1-201ENST00000390436 SBNO2Q9Y2G9 1366 aa9.6□□□□□ -0.87
TRAV13-1-201ENST00000390436 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.59□□□□□ -0.87
TRAV13-1-201ENST00000390436 NLGN2Q8NFZ4 835 aa9.59□□□□□ -0.87
TRAV13-1-201ENST00000390436 CEP350Q5VT06 3117 aa9.59□□□□□ -0.87
TRAV13-1-201ENST00000390436 GALR2O43603 387 aaPredicted RBP9.58□□□□□ -0.88
TRAV13-1-201ENST00000390436 TSHZ2Q9NRE2 1034 aa9.58□□□□□ -0.88
TRAV13-1-201ENST00000390436 NSD2O96028 1365 aa9.58□□□□□ -0.88
TRAV13-1-201ENST00000390436 PNPLA7Q6ZV29 1317 aa9.57□□□□□ -0.88
TRAV13-1-201ENST00000390436 TAF1LQ8IZX4 1826 aa9.57□□□□□ -0.88
TRAV13-1-201ENST00000390436 EXOC5O00471 708 aa9.57□□□□□ -0.88
TRAV13-1-201ENST00000390436 SMIM5Q71RC9 77 aa9.57□□□□□ -0.88
TRAV13-1-201ENST00000390436 AMIGO3Q86WK7 504 aa9.57□□□□□ -0.88
TRAV13-1-201ENST00000390436 MTFR1LQ9H019 292 aa9.57□□□□□ -0.88
TRAV13-1-201ENST00000390436 STK32BQ9NY57 414 aa9.57□□□□□ -0.88
TRAV13-1-201ENST00000390436 BRD4O60885 1362 aaPredicted RBP9.57□□□□□ -0.88
TRAV13-1-201ENST00000390436 ERBB3P21860 1342 aa9.56□□□□□ -0.88
TRAV13-1-201ENST00000390436 TOGARAM1Q9Y4F4 1720 aa9.56□□□□□ -0.88
TRAV13-1-201ENST00000390436 USP31Q70CQ4 1352 aa9.56□□□□□ -0.88
TRAV13-1-201ENST00000390436 KTN1Q86UP2 1357 aaKnown RBP9.56□□□□□ -0.88
TRAV13-1-201ENST00000390436 CSB-PGBD3P0DP91 1061 aa9.56□□□□□ -0.88
TRAV13-1-201ENST00000390436 YBX3P16989 372 aaKnown RBP eCLIP9.56□□□□□ -0.88
TRAV13-1-201ENST00000390436 EFCAB3Q8N7B9 438 aa9.56□□□□□ -0.88
TRAV13-1-201ENST00000390436 TMEM106CQ9BVX2 250 aa9.56□□□□□ -0.88
TRAV13-1-201ENST00000390436 MFRPQ9BY79 579 aa9.56□□□□□ -0.88
TRAV13-1-201ENST00000390436 SLC12A5Q9H2X9 1139 aa9.56□□□□□ -0.88
TRAV13-1-201ENST00000390436 RYDENQ9NUL5 291 aaKnown RBP9.56□□□□□ -0.88
TRAV13-1-201ENST00000390436 TIE1P35590 1138 aa9.55□□□□□ -0.88
TRAV13-1-201ENST00000390436 CLCN6P51797 869 aa9.55□□□□□ -0.88
TRAV13-1-201ENST00000390436 C1QTNF8P60827 252 aa9.55□□□□□ -0.88
TRAV13-1-201ENST00000390436 VSIG10Q8N0Z9 540 aa9.55□□□□□ -0.88
TRAV13-1-201ENST00000390436 ARXQ96QS3 562 aa9.55□□□□□ -0.88
TRAV13-1-201ENST00000390436 NLRP2Q9NX02 1062 aa9.55□□□□□ -0.88
TRAV13-1-201ENST00000390436 EVC2Q86UK5 1308 aa9.55□□□□□ -0.88
TRAV13-1-201ENST00000390436 ITGB4P16144 1822 aa9.54□□□□□ -0.88
TRAV13-1-201ENST00000390436 SENP3-EIF4A1A0A087X0R7 540 aa9.54□□□□□ -0.88
TRAV13-1-201ENST00000390436 ANKRD24Q8TF21 1146 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms