RNA–Protein interactions for RNA: ENST00000371472.6

NSMF-203, Transcript of NMDA receptor synaptonuclear signaling and neuronal migration factor, humanhuman

APPRIS P3 TSL 2 BASIC

Gene NSMF, Length 1,852 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMF-203ENST00000371472 PKD1L3Q7Z443 1732 aa27.41■■□□□ 1.98
NSMF-203ENST00000371472 TNS2Q63HR2 1409 aa27.4■■□□□ 1.98
NSMF-203ENST00000371472 U2AF1L5P0DN76 240 aaPredicted RBP27.39■■□□□ 1.98
NSMF-203ENST00000371472 U2AF1Q01081 240 aaKnown RBP eCLIP27.39■■□□□ 1.986e-9■■■■■ 28.8
NSMF-203ENST00000371472 FAM182BQ5T319 152 aa27.39■■□□□ 1.98
NSMF-203ENST00000371472 RSPH6AQ9H0K4 717 aa27.38■■□□□ 1.97
NSMF-203ENST00000371472 RAPGEF4Q8WZA2 1011 aa27.37■■□□□ 1.97
NSMF-203ENST00000371472 MRS2Q9HD23 443 aa27.37■■□□□ 1.97
NSMF-203ENST00000371472 DDB1Q16531 1140 aa27.35■■□□□ 1.97
NSMF-203ENST00000371472 CDCA7Q9BWT1 371 aaPredicted RBP27.34■■□□□ 1.97
NSMF-203ENST00000371472 NUDCQ9Y266 331 aa27.34■■□□□ 1.97
NSMF-203ENST00000371472 MARCH10Q8NA82 808 aaPredicted RBP27.34■■□□□ 1.97
NSMF-203ENST00000371472 PHACTR3Q96KR7 559 aa27.34■■□□□ 1.97
NSMF-203ENST00000371472 TATP17735 454 aaPredicted RBP27.33■■□□□ 1.97
NSMF-203ENST00000371472 PRKAR2BP31323 418 aa27.33■■□□□ 1.97
NSMF-203ENST00000371472 PNISRQ8TF01 805 aaKnown RBP27.32■■□□□ 1.96
NSMF-203ENST00000371472 ADAMTS8Q9UP79 889 aa27.32■■□□□ 1.96
NSMF-203ENST00000371472 CYP27B1O15528 508 aa27.31■■□□□ 1.96
NSMF-203ENST00000371472 ZCRB1Q8TBF4 217 aaKnown RBP27.3■■□□□ 1.96
NSMF-203ENST00000371472 PLEKHF1Q96S99 279 aa27.3■■□□□ 1.96
NSMF-203ENST00000371472 KRT27Q7Z3Y8 459 aa27.3■■□□□ 1.96
NSMF-203ENST00000371472 EXOC5O00471 708 aa27.29■■□□□ 1.96
NSMF-203ENST00000371472 DDX54Q8TDD1 881 aaKnown RBP27.28■■□□□ 1.96
NSMF-203ENST00000371472 FCHSD2O94868 740 aa27.27■■□□□ 1.96
NSMF-203ENST00000371472 MTHFSDQ2M296 383 aaKnown RBP27.26■■□□□ 1.95
NSMF-203ENST00000371472 CCDC146Q8IYE0 955 aa27.26■■□□□ 1.95
NSMF-203ENST00000371472 GTF3C3Q9Y5Q9 886 aa27.26■■□□□ 1.95
NSMF-203ENST00000371472 TOGARAM1Q9Y4F4 1720 aa27.26■■□□□ 1.95
NSMF-203ENST00000371472 PDE3BQ13370 1112 aa27.25■■□□□ 1.95
NSMF-203ENST00000371472 WDR43Q15061 677 aaKnown RBP eCLIP27.25■■□□□ 1.95
NSMF-203ENST00000371472 PLEKHG2Q9H7P9 1386 aa27.25■■□□□ 1.95
NSMF-203ENST00000371472 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.24■■□□□ 1.95
NSMF-203ENST00000371472 PCDH11XQ9BZA7 1347 aa27.23■■□□□ 1.95
NSMF-203ENST00000371472 PCDH11YQ9BZA8 1340 aa27.23■■□□□ 1.95
NSMF-203ENST00000371472 PTF1AQ7RTS3 328 aa27.22■■□□□ 1.95
NSMF-203ENST00000371472 PHKG2P15735 406 aa27.21■■□□□ 1.95
NSMF-203ENST00000371472 SPG7Q9UQ90 795 aa27.21■■□□□ 1.95
NSMF-203ENST00000371472 ZNF530Q6P9A1 599 aaPredicted RBP27.21■■□□□ 1.95
NSMF-203ENST00000371472 KDM6AO15550 1401 aaPredicted RBP27.2■■□□□ 1.95
NSMF-203ENST00000371472 SBF2Q86WG5 1849 aa27.2■■□□□ 1.95
NSMF-203ENST00000371472 DOT1LQ8TEK3 1739 aa27.2■■□□□ 1.95
NSMF-203ENST00000371472 PLEKHO1Q53GL0 409 aaPredicted RBP27.2■■□□□ 1.94
NSMF-203ENST00000371472 SENP3-EIF4A1A0A087X0R7 540 aa27.19■■□□□ 1.94
NSMF-203ENST00000371472 AMOTQ4VCS5 1084 aa27.19■■□□□ 1.94
NSMF-203ENST00000371472 FAM9BQ8IZU0 186 aa27.18■■□□□ 1.94
NSMF-203ENST00000371472 DLG5Q8TDM6 1919 aa27.17■■□□□ 1.94
NSMF-203ENST00000371472 BCL9O00512 1426 aa27.17■■□□□ 1.94
NSMF-203ENST00000371472 ADAMTS7Q9UKP4 1686 aa27.15■■□□□ 1.94
NSMF-203ENST00000371472 KCNQ2O43526 872 aa27.15■■□□□ 1.94
NSMF-203ENST00000371472 NKX1-1Q15270 411 aaPredicted RBP27.15■■□□□ 1.94
NSMF-203ENST00000371472 IFNL2Q8IZJ0 200 aa27.15■■□□□ 1.94
NSMF-203ENST00000371472 ACSBG1Q96GR2 724 aa27.15■■□□□ 1.94
NSMF-203ENST00000371472 VIRMAQ69YN4 1812 aaKnown RBP27.14■■□□□ 1.94
NSMF-203ENST00000371472 MPRIPQ6WCQ1 1025 aa27.14■■□□□ 1.94
NSMF-203ENST00000371472 RRP7AQ9Y3A4 280 aaKnown RBP27.13■■□□□ 1.93
NSMF-203ENST00000371472 NHSQ6T4R5 1651 aa27.12■■□□□ 1.93
NSMF-203ENST00000371472 SCN11AQ9UI33 1791 aa27.12■■□□□ 1.93
NSMF-203ENST00000371472 FAM196AQ6ZSG2 479 aa27.12■■□□□ 1.93
NSMF-203ENST00000371472 RUNDC1Q96C34 613 aa27.12■■□□□ 1.93
NSMF-203ENST00000371472 LGR6Q9HBX8 967 aa27.12■■□□□ 1.93
NSMF-203ENST00000371472 TNS1Q9HBL0 1735 aaKnown RBP27.12■■□□□ 1.93
NSMF-203ENST00000371472 MAP3K5Q99683 1374 aa27.11■■□□□ 1.93
NSMF-203ENST00000371472 AKAP4Q5JQC9 854 aa27.1■■□□□ 1.93
NSMF-203ENST00000371472 ITGB4P16144 1822 aa27.1■■□□□ 1.93
NSMF-203ENST00000371472 GAS2L2Q8NHY3 880 aa27.1■■□□□ 1.93
NSMF-203ENST00000371472 MAPK8IP3Q9UPT6 1336 aa27.1■■□□□ 1.93
NSMF-203ENST00000371472 TRIM37O94972 964 aa27.09■■□□□ 1.93
NSMF-203ENST00000371472 NFE2L2Q16236 605 aa27.09■■□□□ 1.93
NSMF-203ENST00000371472 C1orf141Q5JVX7 400 aa27.09■■□□□ 1.93
NSMF-203ENST00000371472 KAT6BQ8WYB5 2073 aa27.09■■□□□ 1.93
NSMF-203ENST00000371472 APAF1O14727 1248 aa27.08■■□□□ 1.93
NSMF-203ENST00000371472 DCTN1Q14203 1278 aa27.08■■□□□ 1.93
NSMF-203ENST00000371472 TMPOP42166 694 aaKnown RBP27.08■■□□□ 1.93
NSMF-203ENST00000371472 IL17REQ8NFR9 667 aa27.08■■□□□ 1.93
NSMF-203ENST00000371472 PRIM1P49642 420 aaKnown RBP27.07■■□□□ 1.92
NSMF-203ENST00000371472 GNAT3A8MTJ3 354 aa27.06■■□□□ 1.92
NSMF-203ENST00000371472 MCM10Q7L590 875 aa27.06■■□□□ 1.92
NSMF-203ENST00000371472 DCAF5Q96JK2 942 aa27.06■■□□□ 1.92
NSMF-203ENST00000371472 THUMPD2Q9BTF0 503 aaKnown RBP27.06■■□□□ 1.92
NSMF-203ENST00000371472 MRC1P22897 1456 aa27.06■■□□□ 1.92
NSMF-203ENST00000371472 BTAF1O14981 1849 aa27.06■■□□□ 1.92
NSMF-203ENST00000371472 NEUROD2Q15784 382 aa27.05■■□□□ 1.92
NSMF-203ENST00000371472 CEMIPQ8WUJ3 1361 aa27.04■■□□□ 1.92
NSMF-203ENST00000371472 HNRNPUQ00839 825 aaKnown RBP eCLIP27.04■■□□□ 1.92
NSMF-203ENST00000371472 PNNQ9H307 717 aaKnown RBP27.04■■□□□ 1.92
NSMF-203ENST00000371472 RNMTO43148 476 aaKnown RBP27.04■■□□□ 1.92
NSMF-203ENST00000371472 SYTL4Q96C24 671 aaPredicted RBP27.04■■□□□ 1.92
NSMF-203ENST00000371472 TRIM35Q9UPQ4 493 aa27.03■■□□□ 1.92
NSMF-203ENST00000371472 UPF1Q92900 1129 aaKnown RBP eCLIP27.02■■□□□ 1.922e-9■■■■■ 32.1
NSMF-203ENST00000371472 SIPA1L3O60292 1781 aaPredicted RBP27.02■■□□□ 1.92
NSMF-203ENST00000371472 RIPK4P57078 832 aa27.02■■□□□ 1.92
NSMF-203ENST00000371472 PIGBQ92521 554 aa27.01■■□□□ 1.91
NSMF-203ENST00000371472 HSP90AB1P08238 724 aaKnown RBP27■■□□□ 1.91
NSMF-203ENST00000371472 NEFMP07197 916 aa27■■□□□ 1.91
NSMF-203ENST00000371472 BCL11BQ9C0K0 894 aaPredicted RBP27■■□□□ 1.91
NSMF-203ENST00000371472 NFATC2IPQ8NCF5 419 aa26.98■■□□□ 1.91
NSMF-203ENST00000371472 ERVV-2B6SEH9 535 aa26.97■■□□□ 1.91
NSMF-203ENST00000371472 SLC52A2Q9HAB3 445 aa26.97■■□□□ 1.91
NSMF-203ENST00000371472 PAPPAQ13219 1627 aa26.95■■□□□ 1.9
NSMF-203ENST00000371472 SALL2Q9Y467 1007 aaPredicted RBP26.95■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms