RNA–Protein interactions for RNA: ENST00000369846.8

LCA5-201, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,542 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-201ENST00000369846 SNW1Q13573 536 aaKnown RBP10.05□□□□□ -0.8
LCA5-201ENST00000369846 SPECC1Q5M775 1068 aa10.05□□□□□ -0.8
LCA5-201ENST00000369846 CCAR1Q8IX12 1150 aaKnown RBP10.05□□□□□ -0.8
LCA5-201ENST00000369846 CCDC148Q8NFR7 591 aa10.05□□□□□ -0.8
LCA5-201ENST00000369846 MAGEC2Q9UBF1 373 aaPredicted RBP10.05□□□□□ -0.8
LCA5-201ENST00000369846 PHACTR2O75167 634 aa10.05□□□□□ -0.8
LCA5-201ENST00000369846 U2AF2P26368 475 aaKnown RBP eCLIP10.05□□□□□ -0.8
LCA5-201ENST00000369846 FKBP5Q13451 457 aaPredicted RBP10.05□□□□□ -0.8
LCA5-201ENST00000369846 GTF3C6Q969F1 213 aa10.05□□□□□ -0.8
LCA5-201ENST00000369846 FEZ1Q99689 392 aa10.05□□□□□ -0.8
LCA5-201ENST00000369846 RNF216Q9NWF9 866 aaPredicted RBP10.05□□□□□ -0.8
LCA5-201ENST00000369846 KIF5CO60282 957 aa10.04□□□□□ -0.8
LCA5-201ENST00000369846 LIG1P18858 919 aa10.04□□□□□ -0.8
LCA5-201ENST00000369846 SLC26A8Q96RN1 970 aa10.04□□□□□ -0.8
LCA5-201ENST00000369846 MPHOSPH10O00566 681 aaKnown RBP10.04□□□□□ -0.8
LCA5-201ENST00000369846 ERC2O15083 957 aa10.04□□□□□ -0.8
LCA5-201ENST00000369846 KLHL40Q2TBA0 621 aa10.04□□□□□ -0.8
LCA5-201ENST00000369846 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.04□□□□□ -0.8
LCA5-201ENST00000369846 WASHC2CQ9Y4E1 1318 aa10.03□□□□□ -0.8
LCA5-201ENST00000369846 EBAG9O00559 213 aa10.03□□□□□ -0.8
LCA5-201ENST00000369846 A0A1B0GUA9 196 aa10.03□□□□□ -0.8
LCA5-201ENST00000369846 BAG4O95429 457 aaKnown RBP10.03□□□□□ -0.8
LCA5-201ENST00000369846 KRBA2Q6ZNG9 492 aa10.03□□□□□ -0.8
LCA5-201ENST00000369846 BCORL1Q5H9F3 1711 aa10.03□□□□□ -0.8
LCA5-201ENST00000369846 ATRIPQ8WXE1 791 aa10.03□□□□□ -0.8
LCA5-201ENST00000369846 TERF2IPQ9NYB0 399 aa10.03□□□□□ -0.8
LCA5-201ENST00000369846 CADPSQ9ULU8 1353 aa10.03□□□□□ -0.8
LCA5-201ENST00000369846 EIF2S2P20042 333 aaKnown RBP10.03□□□□□ -0.8
LCA5-201ENST00000369846 NUP133Q8WUM0 1156 aa10.03□□□□□ -0.8
LCA5-201ENST00000369846 SCLT1Q96NL6 688 aa10.03□□□□□ -0.8
LCA5-201ENST00000369846 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.03□□□□□ -0.82e-6■■■■■ 149.1
LCA5-201ENST00000369846 TEX14Q8IWB6 1497 aa10.02□□□□□ -0.8
LCA5-201ENST00000369846 G3BP1Q13283 466 aaKnown RBP eCLIP10.02□□□□□ -0.81
LCA5-201ENST00000369846 OTUD6BQ8N6M0 293 aa10.02□□□□□ -0.81
LCA5-201ENST00000369846 DHX16O60231 1041 aaKnown RBP10.02□□□□□ -0.81
LCA5-201ENST00000369846 DNA2P51530 1060 aa10.02□□□□□ -0.81
LCA5-201ENST00000369846 GNG11P61952 73 aa10.02□□□□□ -0.81
LCA5-201ENST00000369846 ZSCAN23Q3MJ62 389 aa10.02□□□□□ -0.81
LCA5-201ENST00000369846 LUC7LQ9NQ29 371 aaKnown RBP10.02□□□□□ -0.81
LCA5-201ENST00000369846 PIP4K2AP48426 406 aaPredicted RBP10.02□□□□□ -0.81
LCA5-201ENST00000369846 IFFO1Q0D2I5 559 aa10.02□□□□□ -0.81
LCA5-201ENST00000369846 LRRFIP1Q32MZ4 808 aaKnown RBP10.02□□□□□ -0.81
LCA5-201ENST00000369846 RUNDC1Q96C34 613 aa10.02□□□□□ -0.81
LCA5-201ENST00000369846 CCDC186Q7Z3E2 898 aa10.01□□□□□ -0.81
LCA5-201ENST00000369846 JMYQ8N9B5 988 aa10.01□□□□□ -0.81
LCA5-201ENST00000369846 LTV1Q96GA3 475 aaPredicted RBP10.01□□□□□ -0.81
LCA5-201ENST00000369846 HYPKQ9NX55 129 aa10.01□□□□□ -0.81
LCA5-201ENST00000369846 CYP46A1Q9Y6A2 500 aa10.01□□□□□ -0.81
LCA5-201ENST00000369846 SMTNL1A8MU46 457 aa10.01□□□□□ -0.81
LCA5-201ENST00000369846 ZNF397Q8NF99 534 aaPredicted RBP10.01□□□□□ -0.81
LCA5-201ENST00000369846 TOP1P11387 765 aaKnown RBP10.01□□□□□ -0.81
LCA5-201ENST00000369846 FBF1Q8TES7 1133 aa10.01□□□□□ -0.81
LCA5-201ENST00000369846 CDK13Q14004 1512 aaKnown RBP10.01□□□□□ -0.81
LCA5-201ENST00000369846 DCAF8L1A6NGE4 600 aa10.01□□□□□ -0.81
LCA5-201ENST00000369846 CCDC160A6NGH7 325 aa10.01□□□□□ -0.81
LCA5-201ENST00000369846 MAP2K2P36507 400 aa10.01□□□□□ -0.81
LCA5-201ENST00000369846 SMC1AQ14683 1233 aaKnown RBP10.01□□□□□ -0.81
LCA5-201ENST00000369846 VPS18Q9P253 973 aa10.01□□□□□ -0.81
LCA5-201ENST00000369846 DNAI1Q9UI46 699 aa10.01□□□□□ -0.81
LCA5-201ENST00000369846 CEP83Q9Y592 693 aa10.01□□□□□ -0.81
LCA5-201ENST00000369846 RPRD2Q5VT52 1461 aaKnown RBP10.01□□□□□ -0.81
LCA5-201ENST00000369846 NEMFO60524 1076 aa10□□□□□ -0.81
LCA5-201ENST00000369846 SSBP05455 408 aaKnown RBP eCLIP10□□□□□ -0.81
LCA5-201ENST00000369846 CNTROBQ8N137 903 aa10□□□□□ -0.81
LCA5-201ENST00000369846 MYCBPQ99417 103 aaPredicted RBP10□□□□□ -0.81
LCA5-201ENST00000369846 FSD1Q9BTV5 496 aa10□□□□□ -0.81
LCA5-201ENST00000369846 GOLIM4O00461 696 aa10□□□□□ -0.81
LCA5-201ENST00000369846 SLU7O95391 586 aaKnown RBP10□□□□□ -0.81
LCA5-201ENST00000369846 MCM3P25205 808 aa10□□□□□ -0.81
LCA5-201ENST00000369846 UBE4AQ14139 1066 aa10□□□□□ -0.81
LCA5-201ENST00000369846 CPLX3Q8WVH0 158 aa10□□□□□ -0.81
LCA5-201ENST00000369846 SURF6O75683 361 aaKnown RBP10□□□□□ -0.81
LCA5-201ENST00000369846 KIF4AO95239 1232 aa10□□□□□ -0.81
LCA5-201ENST00000369846 ZNF165P49910 485 aa10□□□□□ -0.81
LCA5-201ENST00000369846 HLTFQ14527 1009 aaKnown RBP eCLIP10□□□□□ -0.81
LCA5-201ENST00000369846 GCC1Q96CN9 775 aa10□□□□□ -0.81
LCA5-201ENST00000369846 TXLNAP40222 546 aa9.99□□□□□ -0.81
LCA5-201ENST00000369846 TSC1Q92574 1164 aa9.99□□□□□ -0.81
LCA5-201ENST00000369846 CEP63Q96MT8 703 aa9.99□□□□□ -0.81
LCA5-201ENST00000369846 ERICH2A1L162 156 aa9.99□□□□□ -0.81
LCA5-201ENST00000369846 RAD21O60216 631 aa9.99□□□□□ -0.81
LCA5-201ENST00000369846 TMC6Q7Z403 805 aa9.99□□□□□ -0.81
LCA5-201ENST00000369846 CCDC12Q8WUD4 166 aaPredicted RBP9.99□□□□□ -0.81
LCA5-201ENST00000369846 TAF4BQ92750 862 aa9.99□□□□□ -0.81
LCA5-201ENST00000369846 DACH1Q9UI36 760 aa9.99□□□□□ -0.81
LCA5-201ENST00000369846 TRAK1Q9UPV9 953 aa9.99□□□□□ -0.81
LCA5-201ENST00000369846 CLNS1AP54105 237 aaKnown RBP9.99□□□□□ -0.81
LCA5-201ENST00000369846 CCDC6Q16204 474 aa9.99□□□□□ -0.81
LCA5-201ENST00000369846 SPECC1LQ69YQ0 1117 aa9.99□□□□□ -0.81
LCA5-201ENST00000369846 CHD1LQ86WJ1 897 aa9.99□□□□□ -0.81
LCA5-201ENST00000369846 ERC1Q8IUD2 1116 aa9.99□□□□□ -0.81
LCA5-201ENST00000369846 SERPINA10Q9UK55 444 aa9.99□□□□□ -0.81
LCA5-201ENST00000369846 ZBTB12Q9Y330 459 aaPredicted RBP9.99□□□□□ -0.81
LCA5-201ENST00000369846 ROCK1Q13464 1354 aa9.99□□□□□ -0.81
LCA5-201ENST00000369846 HMGXB3Q12766 1538 aa9.99□□□□□ -0.81
LCA5-201ENST00000369846 NEBLO76041 1014 aa9.99□□□□□ -0.81
LCA5-201ENST00000369846 BRD2P25440 801 aaKnown RBP9.99□□□□□ -0.81
LCA5-201ENST00000369846 EIF5P55010 431 aaKnown RBP9.99□□□□□ -0.81
LCA5-201ENST00000369846 WASHC4Q2M389 1173 aa9.99□□□□□ -0.81
LCA5-201ENST00000369846 TCP11L2Q8N4U5 519 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms