RNA–Protein interactions for RNA: ENST00000368905.8

SCNM1-202, Transcript of sodium channel modifier 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCNM1, Length 2,016 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNM1-202ENST00000368905 WDHD1O75717 1129 aaPredicted RBP12.48□□□□□ -0.41
SCNM1-202ENST00000368905 POLA2Q14181 598 aa12.48□□□□□ -0.41
SCNM1-202ENST00000368905 DDX46Q7L014 1031 aaKnown RBP12.48□□□□□ -0.41
SCNM1-202ENST00000368905 AMOTL1Q8IY63 956 aa12.48□□□□□ -0.41
SCNM1-202ENST00000368905 SCP2P22307 547 aa12.47□□□□□ -0.41
SCNM1-202ENST00000368905 BDNFP23560 247 aa12.47□□□□□ -0.41
SCNM1-202ENST00000368905 C4orf46Q504U0 113 aa12.47□□□□□ -0.41
SCNM1-202ENST00000368905 IFT172Q9UG01 1749 aa12.47□□□□□ -0.41
SCNM1-202ENST00000368905 ARHGEF40Q8TER5 1519 aa12.47□□□□□ -0.41
SCNM1-202ENST00000368905 ABCA6Q8N139 1617 aa12.47□□□□□ -0.41
SCNM1-202ENST00000368905 NRXN1Q9ULB1 1477 aa12.46□□□□□ -0.41
SCNM1-202ENST00000368905 TCERG1O14776 1098 aaKnown RBP12.46□□□□□ -0.41
SCNM1-202ENST00000368905 STK10O94804 968 aaKnown RBP12.46□□□□□ -0.41
SCNM1-202ENST00000368905 GABBR1Q9UBS5 961 aa12.46□□□□□ -0.41
SCNM1-202ENST00000368905 ADGRB3O60242 1522 aa12.46□□□□□ -0.41
SCNM1-202ENST00000368905 NPC1L1Q9UHC9 1359 aa12.46□□□□□ -0.41
SCNM1-202ENST00000368905 DIP2CQ9Y2E4 1556 aa12.46□□□□□ -0.42
SCNM1-202ENST00000368905 KDM5AP29375 1690 aaKnown RBP12.46□□□□□ -0.42
SCNM1-202ENST00000368905 HSP90AA2PQ14568 343 aaPredicted RBP12.45□□□□□ -0.42
SCNM1-202ENST00000368905 ERBB3P21860 1342 aa12.45□□□□□ -0.42
SCNM1-202ENST00000368905 YEATS2Q9ULM3 1422 aa12.45□□□□□ -0.42
SCNM1-202ENST00000368905 GYS2P54840 703 aa12.45□□□□□ -0.42
SCNM1-202ENST00000368905 PSME1Q06323 249 aa12.45□□□□□ -0.42
SCNM1-202ENST00000368905 NAALADL2Q58DX5 795 aa12.45□□□□□ -0.42
SCNM1-202ENST00000368905 HSP90AB3PQ58FF7 597 aa12.45□□□□□ -0.42
SCNM1-202ENST00000368905 LARGE2Q8N3Y3 721 aa12.45□□□□□ -0.42
SCNM1-202ENST00000368905 SETBP1Q9Y6X0 1596 aa12.45□□□□□ -0.42
SCNM1-202ENST00000368905 RNF123Q5XPI4 1314 aa12.44□□□□□ -0.42
SCNM1-202ENST00000368905 hCG_2014768A0A024R1R8 64 aa12.44□□□□□ -0.42
SCNM1-202ENST00000368905 COPB2P35606 906 aa12.44□□□□□ -0.42
SCNM1-202ENST00000368905 IGBP1P78318 339 aa12.44□□□□□ -0.42
SCNM1-202ENST00000368905 GGT6Q6P531 493 aa12.44□□□□□ -0.42
SCNM1-202ENST00000368905 C11orf96Q7Z7L8 435 aa12.44□□□□□ -0.42
SCNM1-202ENST00000368905 TMX4Q9H1E5 349 aaPredicted RBP12.44□□□□□ -0.42
SCNM1-202ENST00000368905 NPATQ14207 1427 aa12.44□□□□□ -0.42
SCNM1-202ENST00000368905 HSP90AB2PQ58FF8 381 aa12.44□□□□□ -0.42
SCNM1-202ENST00000368905 ABCC3O15438 1527 aa12.43□□□□□ -0.42
SCNM1-202ENST00000368905 CHPF2Q9P2E5 772 aa12.43□□□□□ -0.42
SCNM1-202ENST00000368905 ASXL1Q8IXJ9 1541 aa12.43□□□□□ -0.42
SCNM1-202ENST00000368905 UGGT1Q9NYU2 1555 aa12.43□□□□□ -0.42
SCNM1-202ENST00000368905 ZC3H13Q5T200 1668 aaKnown RBP12.42□□□□□ -0.42
SCNM1-202ENST00000368905 RNF25Q96BH1 459 aaPredicted RBP12.42□□□□□ -0.42
SCNM1-202ENST00000368905 DDRGK1Q96HY6 314 aa12.42□□□□□ -0.42
SCNM1-202ENST00000368905 WWC3Q9ULE0 1092 aa12.42□□□□□ -0.42
SCNM1-202ENST00000368905 ADGRF5Q8IZF2 1346 aa12.42□□□□□ -0.42
SCNM1-202ENST00000368905 CARNS1A5YM72 827 aa12.42□□□□□ -0.42
SCNM1-202ENST00000368905 BLMP54132 1417 aaPredicted RBP12.42□□□□□ -0.42
SCNM1-202ENST00000368905 CFAP70Q5T0N1 1121 aa12.42□□□□□ -0.42
SCNM1-202ENST00000368905 ATL2Q8NHH9 583 aa12.42□□□□□ -0.42
SCNM1-202ENST00000368905 FBXO9Q9UK97 447 aaPredicted RBP12.42□□□□□ -0.42
SCNM1-202ENST00000368905 MYO3AQ8NEV4 1616 aa12.41□□□□□ -0.42
SCNM1-202ENST00000368905 MROH2AA6NES4 1674 aa12.41□□□□□ -0.42
SCNM1-202ENST00000368905 REREQ9P2R6 1566 aa12.41□□□□□ -0.42
SCNM1-202ENST00000368905 ARHGAP31Q2M1Z3 1444 aa12.41□□□□□ -0.42
SCNM1-202ENST00000368905 IRF6O14896 467 aa12.41□□□□□ -0.42
SCNM1-202ENST00000368905 ZNF16P17020 682 aaPredicted RBP12.41□□□□□ -0.42
SCNM1-202ENST00000368905 TPX2Q9ULW0 747 aaKnown RBP12.41□□□□□ -0.42
SCNM1-202ENST00000368905 CAMSAP1Q5T5Y3 1602 aa12.41□□□□□ -0.42
SCNM1-202ENST00000368905 PPLO60437 1756 aa12.41□□□□□ -0.42
SCNM1-202ENST00000368905 NOS1P29475 1434 aa12.41□□□□□ -0.42
SCNM1-202ENST00000368905 PPP4CP60510 307 aa12.4□□□□□ -0.42
SCNM1-202ENST00000368905 SENP7Q9BQF6 1050 aa12.4□□□□□ -0.42
SCNM1-202ENST00000368905 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.4□□□□□ -0.42
SCNM1-202ENST00000368905 TMA7Q9Y2S6 64 aaKnown RBP12.4□□□□□ -0.42
SCNM1-202ENST00000368905 CADPS2Q86UW7 1296 aa12.4□□□□□ -0.42
SCNM1-202ENST00000368905 USTQ9Y2C2 406 aa12.4□□□□□ -0.42
SCNM1-202ENST00000368905 PIK3C2GO75747 1445 aa12.39□□□□□ -0.43
SCNM1-202ENST00000368905 WDR43Q15061 677 aaKnown RBP eCLIP12.39□□□□□ -0.43
SCNM1-202ENST00000368905 PTPROQ16827 1216 aa12.39□□□□□ -0.43
SCNM1-202ENST00000368905 C14orf93Q9H972 538 aaKnown RBP12.39□□□□□ -0.43
SCNM1-202ENST00000368905 CEP126Q9P2H0 1117 aa12.39□□□□□ -0.43
SCNM1-202ENST00000368905 CFAP65Q6ZU64 1925 aaKnown RBP12.39□□□□□ -0.43
SCNM1-202ENST00000368905 PUS10Q3MIT2 529 aaKnown RBP12.38□□□□□ -0.43
SCNM1-202ENST00000368905 CENPJQ9HC77 1338 aaPredicted RBP12.38□□□□□ -0.43
SCNM1-202ENST00000368905 MYOM1P52179 1685 aa12.38□□□□□ -0.43
SCNM1-202ENST00000368905 PPP2R1AP30153 589 aa12.38□□□□□ -0.43
SCNM1-202ENST00000368905 MPNDQ8N594 471 aa12.38□□□□□ -0.43
SCNM1-202ENST00000368905 ERVK-7P63135 1459 aa12.38□□□□□ -0.43
SCNM1-202ENST00000368905 MTA1Q13330 715 aa12.37□□□□□ -0.43
SCNM1-202ENST00000368905 ANKRD23Q86SG2 305 aa12.37□□□□□ -0.43
SCNM1-202ENST00000368905 NOP9Q86U38 636 aaKnown RBP12.37□□□□□ -0.43
SCNM1-202ENST00000368905 CFAP69A5D8W1 941 aa12.37□□□□□ -0.43
SCNM1-202ENST00000368905 DNAJC14Q6Y2X3 702 aaPredicted RBP12.37□□□□□ -0.43
SCNM1-202ENST00000368905 SWAP70Q9UH65 585 aa12.37□□□□□ -0.43
SCNM1-202ENST00000368905 RBM19Q9Y4C8 960 aaKnown RBP12.37□□□□□ -0.43
SCNM1-202ENST00000368905 PIK3C2BO00750 1634 aa12.36□□□□□ -0.43
SCNM1-202ENST00000368905 AGLP35573 1532 aa12.36□□□□□ -0.43
SCNM1-202ENST00000368905 NBPF6Q5VWK0 638 aa12.36□□□□□ -0.43
SCNM1-202ENST00000368905 NBPF5PQ86XG9 351 aaPredicted RBP12.36□□□□□ -0.43
SCNM1-202ENST00000368905 CCDC146Q8IYE0 955 aa12.36□□□□□ -0.43
SCNM1-202ENST00000368905 NBPF4Q96M43 638 aa12.36□□□□□ -0.43
SCNM1-202ENST00000368905 NRBP1Q9UHY1 535 aa12.36□□□□□ -0.43
SCNM1-202ENST00000368905 RCAN3Q9UKA8 241 aa12.36□□□□□ -0.43
SCNM1-202ENST00000368905 SIGLEC1Q9BZZ2 1709 aa12.36□□□□□ -0.43
SCNM1-202ENST00000368905 KCNB2Q92953 911 aa12.35□□□□□ -0.43
SCNM1-202ENST00000368905 ZCRB1Q8TBF4 217 aaKnown RBP12.35□□□□□ -0.43
SCNM1-202ENST00000368905 TMEM51Q9NW97 253 aa12.35□□□□□ -0.43
SCNM1-202ENST00000368905 B4GALNT3Q6L9W6 998 aa12.34□□□□□ -0.43
SCNM1-202ENST00000368905 NGEFQ8N5V2 710 aa12.34□□□□□ -0.43
SCNM1-202ENST00000368905 SNRNP27Q8WVK2 155 aaKnown RBP12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms