RNA–Protein interactions for RNA: ENST00000359265.8

PDLIM5-203, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-203ENST00000359265 CPDO75976 1380 aa18.18■□□□□ 0.5
PDLIM5-203ENST00000359265 PRKAR2BP31323 418 aa18.18■□□□□ 0.5
PDLIM5-203ENST00000359265 IP6K1Q92551 441 aa18.18■□□□□ 0.5
PDLIM5-203ENST00000359265 PPP1R1BQ9UD71 204 aaPredicted RBP18.18■□□□□ 0.5
PDLIM5-203ENST00000359265 COL18A1P39060 1754 aa18.17■□□□□ 0.5
PDLIM5-203ENST00000359265 HMOX1P09601 288 aa18.17■□□□□ 0.5
PDLIM5-203ENST00000359265 GOLGA2Q08379 1002 aa18.17■□□□□ 0.5
PDLIM5-203ENST00000359265 CCDC27Q2M243 656 aa18.17■□□□□ 0.5
PDLIM5-203ENST00000359265 NWD2Q9ULI1 1742 aa18.17■□□□□ 0.5
PDLIM5-203ENST00000359265 ZBTB7CA1YPR0 619 aa18.16■□□□□ 0.5
PDLIM5-203ENST00000359265 FAM83GA6ND36 823 aa18.16■□□□□ 0.5
PDLIM5-203ENST00000359265 TMPOP42166 694 aaKnown RBP18.15■□□□□ 0.5
PDLIM5-203ENST00000359265 ZC3H6P61129 1189 aaKnown RBP18.15■□□□□ 0.5
PDLIM5-203ENST00000359265 SPON1Q9HCB6 807 aa18.15■□□□□ 0.5
PDLIM5-203ENST00000359265 RRP7AQ9Y3A4 280 aaKnown RBP18.15■□□□□ 0.5
PDLIM5-203ENST00000359265 KCNQ2O43526 872 aa18.14■□□□□ 0.49
PDLIM5-203ENST00000359265 TRIM37O94972 964 aa18.14■□□□□ 0.49
PDLIM5-203ENST00000359265 WWC1Q8IX03 1113 aa18.14■□□□□ 0.49
PDLIM5-203ENST00000359265 GTF3C3Q9Y5Q9 886 aa18.14■□□□□ 0.49
PDLIM5-203ENST00000359265 IGSF1Q8N6C5 1336 aa18.14■□□□□ 0.49
PDLIM5-203ENST00000359265 KIAA0232Q92628 1395 aa18.14■□□□□ 0.49
PDLIM5-203ENST00000359265 NEUROD2Q15784 382 aa18.13■□□□□ 0.49
PDLIM5-203ENST00000359265 SULT6B1Q6IMI4 303 aa18.13■□□□□ 0.49
PDLIM5-203ENST00000359265 CDCA7LQ96GN5 454 aa18.13■□□□□ 0.49
PDLIM5-203ENST00000359265 KDRP35968 1356 aa18.13■□□□□ 0.49
PDLIM5-203ENST00000359265 PRDM11Q9NQV5 511 aa18.12■□□□□ 0.49
PDLIM5-203ENST00000359265 LMO7Q8WWI1 1683 aa18.12■□□□□ 0.49
PDLIM5-203ENST00000359265 COL14A1Q05707 1796 aaKnown RBP18.12■□□□□ 0.49
PDLIM5-203ENST00000359265 E9PSI1 815 aa18.11■□□□□ 0.49
PDLIM5-203ENST00000359265 APBA3O96018 575 aa18.11■□□□□ 0.49
PDLIM5-203ENST00000359265 NEFLP07196 543 aa18.11■□□□□ 0.49
PDLIM5-203ENST00000359265 NFE2L2Q16236 605 aa18.11■□□□□ 0.49
PDLIM5-203ENST00000359265 WDR63Q8IWG1 891 aa18.11■□□□□ 0.49
PDLIM5-203ENST00000359265 UTRNP46939 3433 aa18.1■□□□□ 0.49
PDLIM5-203ENST00000359265 NUP188Q5SRE5 1749 aa18.1■□□□□ 0.49
PDLIM5-203ENST00000359265 SLFN5Q08AF3 891 aa18.1■□□□□ 0.49
PDLIM5-203ENST00000359265 AEBP1Q8IUX7 1158 aa18.1■□□□□ 0.49
PDLIM5-203ENST00000359265 EYA1Q99502 592 aa18.1■□□□□ 0.49
PDLIM5-203ENST00000359265 NRAPQ86VF7 1730 aa18.09■□□□□ 0.49
PDLIM5-203ENST00000359265 RREB1Q92766 1687 aa18.09■□□□□ 0.49
PDLIM5-203ENST00000359265 RIPK4P57078 832 aa18.09■□□□□ 0.49
PDLIM5-203ENST00000359265 LTV1Q96GA3 475 aaPredicted RBP18.09■□□□□ 0.49
PDLIM5-203ENST00000359265 LMOD3Q0VAK6 560 aa18.08■□□□□ 0.48
PDLIM5-203ENST00000359265 PHACTR3Q96KR7 559 aa18.08■□□□□ 0.48
PDLIM5-203ENST00000359265 SUPT16HQ9Y5B9 1047 aaKnown RBP18.08■□□□□ 0.48
PDLIM5-203ENST00000359265 DUSP27Q5VZP5 1158 aa18.07■□□□□ 0.48
PDLIM5-203ENST00000359265 NCAPD2Q15021 1401 aa18.06■□□□□ 0.48
PDLIM5-203ENST00000359265 ERBB3P21860 1342 aa18.06■□□□□ 0.48
PDLIM5-203ENST00000359265 CHRNA2Q15822 529 aa18.06■□□□□ 0.48
PDLIM5-203ENST00000359265 TRMT2AQ8IZ69 625 aaKnown RBP18.06■□□□□ 0.48
PDLIM5-203ENST00000359265 ANKRD24Q8TF21 1146 aa18.06■□□□□ 0.48
PDLIM5-203ENST00000359265 BTG4Q9NY30 223 aa18.06■□□□□ 0.48
PDLIM5-203ENST00000359265 TRIM35Q9UPQ4 493 aa18.06■□□□□ 0.48
PDLIM5-203ENST00000359265 CEP350Q5VT06 3117 aa18.06■□□□□ 0.48
PDLIM5-203ENST00000359265 VIRMAQ69YN4 1812 aaKnown RBP18.05■□□□□ 0.48
PDLIM5-203ENST00000359265 IL16Q14005 1332 aa18.05■□□□□ 0.48
PDLIM5-203ENST00000359265 NBPF14Q5TI25 921 aa18.05■□□□□ 0.48
PDLIM5-203ENST00000359265 AXIN2Q9Y2T1 843 aa18.05■□□□□ 0.48
PDLIM5-203ENST00000359265 THSD7AQ9UPZ6 1657 aa18.05■□□□□ 0.48
PDLIM5-203ENST00000359265 SPATA31A5Q5VU36 1347 aa18.04■□□□□ 0.48
PDLIM5-203ENST00000359265 SPATA31A7Q8IWB4 1347 aa18.04■□□□□ 0.48
PDLIM5-203ENST00000359265 CHD4Q14839 1912 aa18.04■□□□□ 0.48
PDLIM5-203ENST00000359265 CALD1Q05682 793 aaKnown RBP18.04■□□□□ 0.48
PDLIM5-203ENST00000359265 MYH16Q9H6N6 1097 aa18.04■□□□□ 0.48
PDLIM5-203ENST00000359265 RCAN3Q9UKA8 241 aa18.04■□□□□ 0.48
PDLIM5-203ENST00000359265 COL5A2P05997 1499 aaPredicted RBP18.03■□□□□ 0.48
PDLIM5-203ENST00000359265 FAM196AQ6ZSG2 479 aa18.03■□□□□ 0.48
PDLIM5-203ENST00000359265 SPINK5Q9NQ38 1064 aaPredicted RBP18.03■□□□□ 0.48
PDLIM5-203ENST00000359265 LRRC37A3O60309 1634 aa18.02■□□□□ 0.48
PDLIM5-203ENST00000359265 CSB-PGBD3P0DP91 1061 aa18.02■□□□□ 0.48
PDLIM5-203ENST00000359265 PDGFDQ9GZP0 370 aaPredicted RBP18.02■□□□□ 0.48
PDLIM5-203ENST00000359265 GAS2L2Q8NHY3 880 aa18.01■□□□□ 0.47
PDLIM5-203ENST00000359265 NBPF6Q5VWK0 638 aa18■□□□□ 0.47
PDLIM5-203ENST00000359265 USHBP1Q8N6Y0 703 aa18■□□□□ 0.47
PDLIM5-203ENST00000359265 NBPF4Q96M43 638 aa18■□□□□ 0.47
PDLIM5-203ENST00000359265 PARP4Q9UKK3 1724 aaKnown RBP18■□□□□ 0.47
PDLIM5-203ENST00000359265 RNF123Q5XPI4 1314 aa17.99■□□□□ 0.47
PDLIM5-203ENST00000359265 WDR17Q8IZU2 1322 aa17.99■□□□□ 0.47
PDLIM5-203ENST00000359265 EVA1CP58658 441 aa17.98■□□□□ 0.47
PDLIM5-203ENST00000359265 NLRP2Q9NX02 1062 aa17.98■□□□□ 0.47
PDLIM5-203ENST00000359265 PLEKHG2Q9H7P9 1386 aa17.98■□□□□ 0.47
PDLIM5-203ENST00000359265 PTGER2P43116 358 aa17.97■□□□□ 0.47
PDLIM5-203ENST00000359265 FKBP8Q14318 412 aa17.97■□□□□ 0.47
PDLIM5-203ENST00000359265 MTHFSDQ2M296 383 aaKnown RBP17.97■□□□□ 0.47
PDLIM5-203ENST00000359265 PKD1L3Q7Z443 1732 aa17.97■□□□□ 0.47
PDLIM5-203ENST00000359265 FANCIQ9NVI1 1328 aa17.97■□□□□ 0.47
PDLIM5-203ENST00000359265 TOM1L2Q6ZVM7 507 aa17.96■□□□□ 0.47
PDLIM5-203ENST00000359265 CRB1P82279 1406 aa17.96■□□□□ 0.47
PDLIM5-203ENST00000359265 MAP3K5Q99683 1374 aa17.95■□□□□ 0.46
PDLIM5-203ENST00000359265 RTF1Q92541 710 aaKnown RBP17.95■□□□□ 0.46
PDLIM5-203ENST00000359265 SYT17Q9BSW7 474 aa17.95■□□□□ 0.46
PDLIM5-203ENST00000359265 STRN4Q9NRL3 753 aa17.95■□□□□ 0.46
PDLIM5-203ENST00000359265 CASZ1Q86V15 1759 aa17.94■□□□□ 0.46
PDLIM5-203ENST00000359265 HTATSF1O43719 755 aaKnown RBP17.94■□□□□ 0.46
PDLIM5-203ENST00000359265 GIGYF1O75420 1035 aaPredicted RBP17.94■□□□□ 0.46
PDLIM5-203ENST00000359265 RRP1P56182 461 aaKnown RBP17.94■□□□□ 0.46
PDLIM5-203ENST00000359265 GNAI1P63096 354 aa17.94■□□□□ 0.46
PDLIM5-203ENST00000359265 IFT57Q9NWB7 429 aa17.94■□□□□ 0.46
PDLIM5-203ENST00000359265 ZBTB7AO95365 584 aa17.93■□□□□ 0.46
PDLIM5-203ENST00000359265 CT47B1P0C2W7 299 aaPredicted RBP17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 690 ms