RNA–Protein interactions for RNA: ENST00000359079.8

SGMS2-201, Transcript of sphingomyelin synthase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGMS2, Length 1,887 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS2-201ENST00000359079 CCDC85AQ96PX6 553 aaPredicted RBP6.39□□□□□ -1.39
SGMS2-201ENST00000359079 SETDB2Q96T68 719 aa6.39□□□□□ -1.39
SGMS2-201ENST00000359079 CUEDC1Q9NWM3 386 aaPredicted RBP6.39□□□□□ -1.39
SGMS2-201ENST00000359079 TMA7Q9Y2S6 64 aaKnown RBP6.39□□□□□ -1.39
SGMS2-201ENST00000359079 MAP7D1Q3KQU3 841 aa6.38□□□□□ -1.39
SGMS2-201ENST00000359079 GPR153Q6NV75 609 aa6.38□□□□□ -1.39
SGMS2-201ENST00000359079 MICAL1Q8TDZ2 1067 aa6.38□□□□□ -1.39
SGMS2-201ENST00000359079 DUSP9Q99956 384 aaKnown RBP6.38□□□□□ -1.39
SGMS2-201ENST00000359079 BCL11AQ9H165 835 aa6.38□□□□□ -1.39
SGMS2-201ENST00000359079 WWC3Q9ULE0 1092 aa6.38□□□□□ -1.39
SGMS2-201ENST00000359079 MAPK8P45983 427 aa6.37□□□□□ -1.39
SGMS2-201ENST00000359079 XPCQ01831 940 aaPredicted RBP6.37□□□□□ -1.39
SGMS2-201ENST00000359079 SF3B2Q13435 895 aaKnown RBP6.37□□□□□ -1.39
SGMS2-201ENST00000359079 EGFLAMQ63HQ2 1017 aa6.37□□□□□ -1.39
SGMS2-201ENST00000359079 BLOC1S3Q6QNY0 202 aa6.37□□□□□ -1.39
SGMS2-201ENST00000359079 NLGN1Q8N2Q7 840 aa6.37□□□□□ -1.39
SGMS2-201ENST00000359079 ZSWIM6Q9HCJ5 1215 aa6.37□□□□□ -1.39
SGMS2-201ENST00000359079 MORN1Q5T089 497 aa6.36□□□□□ -1.39
SGMS2-201ENST00000359079 FAM9AQ8IZU1 332 aaPredicted RBP6.36□□□□□ -1.39
SGMS2-201ENST00000359079 TSEN2Q8NCE0 465 aaKnown RBP6.36□□□□□ -1.39
SGMS2-201ENST00000359079 TREHO43280 583 aa6.36□□□□□ -1.39
SGMS2-201ENST00000359079 RNF40O75150 1001 aa6.36□□□□□ -1.39
SGMS2-201ENST00000359079 LDHBP07195 334 aaKnown RBP6.36□□□□□ -1.39
SGMS2-201ENST00000359079 CTHP32929 405 aa6.36□□□□□ -1.39
SGMS2-201ENST00000359079 LCE2DQ5TA82 110 aaPredicted RBP6.36□□□□□ -1.39
SGMS2-201ENST00000359079 SDE2Q6IQ49 451 aa6.36□□□□□ -1.39
SGMS2-201ENST00000359079 RNF34Q969K3 372 aa6.36□□□□□ -1.39
SGMS2-201ENST00000359079 SPACA7Q96KW9 195 aa6.36□□□□□ -1.39
SGMS2-201ENST00000359079 TGIF2Q9GZN2 237 aa6.36□□□□□ -1.39
SGMS2-201ENST00000359079 ZSWIM4Q9H7M6 989 aa6.36□□□□□ -1.39
SGMS2-201ENST00000359079 CCSER2Q9H7U1 834 aa6.36□□□□□ -1.39
SGMS2-201ENST00000359079 MRS2Q9HD23 443 aa6.36□□□□□ -1.39
SGMS2-201ENST00000359079 WEE1P30291 646 aa6.35□□□□□ -1.39
SGMS2-201ENST00000359079 PSME1Q06323 249 aa6.35□□□□□ -1.39
SGMS2-201ENST00000359079 ADAM32Q8TC27 787 aa6.35□□□□□ -1.39
SGMS2-201ENST00000359079 TMC1Q8TDI8 760 aa6.35□□□□□ -1.39
SGMS2-201ENST00000359079 VTI1AQ96AJ9 217 aa6.35□□□□□ -1.39
SGMS2-201ENST00000359079 DOLKQ9UPQ8 538 aa6.35□□□□□ -1.39
SGMS2-201ENST00000359079 TBX22Q9Y458 520 aa6.35□□□□□ -1.39
SGMS2-201ENST00000359079 PCDHGA11Q9Y5H2 935 aa6.35□□□□□ -1.39
SGMS2-201ENST00000359079 HOXB1P14653 301 aaPredicted RBP6.34□□□□□ -1.39
SGMS2-201ENST00000359079 FMR1Q06787 632 aaKnown RBP eCLIP6.34□□□□□ -1.39
SGMS2-201ENST00000359079 SLC43A3Q8NBI5 491 aa6.34□□□□□ -1.39
SGMS2-201ENST00000359079 KCNK17Q96T54 332 aa6.34□□□□□ -1.39
SGMS2-201ENST00000359079 RBCK1Q9BYM8 510 aa6.34□□□□□ -1.39
SGMS2-201ENST00000359079 RBM19Q9Y4C8 960 aaKnown RBP6.34□□□□□ -1.39
SGMS2-201ENST00000359079 SORBS3O60504 671 aa6.34□□□□□ -1.39
SGMS2-201ENST00000359079 MPSTP25325 297 aa6.34□□□□□ -1.39
SGMS2-201ENST00000359079 PTK2Q05397 1052 aa6.34□□□□□ -1.39
SGMS2-201ENST00000359079 PPP1R18Q6NYC8 613 aa6.34□□□□□ -1.39
SGMS2-201ENST00000359079 SAMD7Q7Z3H4 446 aa6.34□□□□□ -1.39
SGMS2-201ENST00000359079 VTI1BQ9UEU0 232 aa6.34□□□□□ -1.39
SGMS2-201ENST00000359079 EMP3P54852 163 aa6.33□□□□□ -1.4
SGMS2-201ENST00000359079 TCEAL1Q15170 157 aa6.33□□□□□ -1.4
SGMS2-201ENST00000359079 TMC4Q7Z404 712 aa6.33□□□□□ -1.4
SGMS2-201ENST00000359079 CDAN1Q8IWY9 1227 aa6.33□□□□□ -1.4
SGMS2-201ENST00000359079 CCDC87Q9NVE4 849 aa6.33□□□□□ -1.4
SGMS2-201ENST00000359079 ZNF76P36508 570 aa6.32□□□□□ -1.4
SGMS2-201ENST00000359079 HDGFP51858 240 aaKnown RBP6.32□□□□□ -1.4
SGMS2-201ENST00000359079 EHHADHQ08426 723 aa6.32□□□□□ -1.4
SGMS2-201ENST00000359079 DSC3Q14574 896 aa6.32□□□□□ -1.4
SGMS2-201ENST00000359079 PDXDC2PQ6P474 469 aa6.32□□□□□ -1.4
SGMS2-201ENST00000359079 HELQQ8TDG4 1101 aa6.32□□□□□ -1.4
SGMS2-201ENST00000359079 USB1Q9BQ65 265 aaKnown RBP6.32□□□□□ -1.4
SGMS2-201ENST00000359079 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.32□□□□□ -1.4
SGMS2-201ENST00000359079 PCDHGB7Q9Y5F8 929 aa6.32□□□□□ -1.4
SGMS2-201ENST00000359079 EMILIN1Q9Y6C2 1016 aa6.32□□□□□ -1.4
SGMS2-201ENST00000359079 PRPF40AO75400 957 aaKnown RBP6.32□□□□□ -1.4
SGMS2-201ENST00000359079 DAB2P98082 770 aa6.32□□□□□ -1.4
SGMS2-201ENST00000359079 ZNF394Q53GI3 561 aa6.32□□□□□ -1.4
SGMS2-201ENST00000359079 GMLQ99445 158 aa6.32□□□□□ -1.4
SGMS2-201ENST00000359079 GIGYF1O75420 1035 aaPredicted RBP6.31□□□□□ -1.4
SGMS2-201ENST00000359079 PLCB3Q01970 1234 aa6.31□□□□□ -1.4
SGMS2-201ENST00000359079 RBL2Q08999 1139 aa6.31□□□□□ -1.4
SGMS2-201ENST00000359079 PSMD2Q13200 908 aa6.31□□□□□ -1.4
SGMS2-201ENST00000359079 JAZF1Q86VZ6 243 aa6.31□□□□□ -1.4
SGMS2-201ENST00000359079 MARVELD3Q96A59 401 aa6.31□□□□□ -1.4
SGMS2-201ENST00000359079 ZBED2Q9BTP6 218 aa6.31□□□□□ -1.4
SGMS2-201ENST00000359079 SAP130Q9H0E3 1048 aa6.31□□□□□ -1.4
SGMS2-201ENST00000359079 NLRP2Q9NX02 1062 aa6.31□□□□□ -1.4
SGMS2-201ENST00000359079 KLHL42Q9P2K6 505 aa6.31□□□□□ -1.4
SGMS2-201ENST00000359079 DMGDHQ9UI17 866 aaKnown RBP6.31□□□□□ -1.4
SGMS2-201ENST00000359079 GPSM3Q9Y4H4 160 aa6.31□□□□□ -1.4
SGMS2-201ENST00000359079 PTCD1O75127 700 aaKnown RBP6.3□□□□□ -1.4
SGMS2-201ENST00000359079 FAM13AO94988 1023 aa6.3□□□□□ -1.4
SGMS2-201ENST00000359079 IGHA2P01877 340 aa6.3□□□□□ -1.4
SGMS2-201ENST00000359079 NPR3P17342 541 aa6.3□□□□□ -1.4
SGMS2-201ENST00000359079 RACK1P63244 317 aaKnown RBP6.3□□□□□ -1.4
SGMS2-201ENST00000359079 Q3C1V9 767 aa6.3□□□□□ -1.4
SGMS2-201ENST00000359079 METTL5Q9NRN9 209 aaKnown RBP6.3□□□□□ -1.4
SGMS2-201ENST00000359079 GPR182O15218 404 aa6.3□□□□□ -1.4
SGMS2-201ENST00000359079 NDUFB5O43674 189 aa6.3□□□□□ -1.4
SGMS2-201ENST00000359079 PDE3BQ13370 1112 aa6.3□□□□□ -1.4
SGMS2-201ENST00000359079 BMS1Q14692 1282 aaKnown RBP6.3□□□□□ -1.4
SGMS2-201ENST00000359079 PTPROQ16827 1216 aa6.3□□□□□ -1.4
SGMS2-201ENST00000359079 PTPRNQ16849 979 aa6.3□□□□□ -1.4
SGMS2-201ENST00000359079 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.3□□□□□ -1.4
SGMS2-201ENST00000359079 SLC52A1Q9NWF4 448 aa6.3□□□□□ -1.4
SGMS2-201ENST00000359079 PPME1Q9Y570 386 aa6.3□□□□□ -1.4
SGMS2-201ENST00000359079 MCCD1P59942 119 aaPredicted RBP6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms