RNA–Protein interactions for RNA: ENST00000327628.9

TRAK1-201, Transcript of trafficking kinesin protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRAK1, Length 5,293 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAK1-201ENST00000327628 PDCL3Q9H2J4 239 aa15.68■□□□□ 0.1
TRAK1-201ENST00000327628 ARAP1Q96P48 1450 aa15.68■□□□□ 0.1
TRAK1-201ENST00000327628 EZRP15311 586 aaKnown RBP15.68■□□□□ 0.1
TRAK1-201ENST00000327628 IMMTQ16891 758 aaKnown RBP15.68■□□□□ 0.1
TRAK1-201ENST00000327628 DEF6Q9H4E7 631 aa15.68■□□□□ 0.1
TRAK1-201ENST00000327628 SNAPC4Q5SXM2 1469 aa15.68■□□□□ 0.1
TRAK1-201ENST00000327628 JAKMIP3Q5VZ66 844 aa15.67■□□□□ 0.1
TRAK1-201ENST00000327628 CHD1LQ86WJ1 897 aa15.67■□□□□ 0.1
TRAK1-201ENST00000327628 EHMT1Q9H9B1 1298 aa15.67■□□□□ 0.1
TRAK1-201ENST00000327628 WDHD1O75717 1129 aaPredicted RBP15.67■□□□□ 0.1
TRAK1-201ENST00000327628 CCDC181Q5TID7 509 aa15.67■□□□□ 0.1
TRAK1-201ENST00000327628 GBP3Q9H0R5 595 aa15.67■□□□□ 0.1
TRAK1-201ENST00000327628 FGFR1OPO95684 399 aaKnown RBP15.67■□□□□ 0.1
TRAK1-201ENST00000327628 GNAT3A8MTJ3 354 aa15.67■□□□□ 0.1
TRAK1-201ENST00000327628 PDCL2Q8N4E4 241 aa15.67■□□□□ 0.1
TRAK1-201ENST00000327628 PDRG1Q9NUG6 133 aa15.66■□□□□ 0.1
TRAK1-201ENST00000327628 H0YHG0 523 aa15.66■□□□□ 0.1
TRAK1-201ENST00000327628 MCM3P25205 808 aa15.66■□□□□ 0.1
TRAK1-201ENST00000327628 SH2B1Q9NRF2 756 aaPredicted RBP15.66■□□□□ 0.1
TRAK1-201ENST00000327628 KIF14Q15058 1648 aa15.66■□□□□ 0.1
TRAK1-201ENST00000327628 AMER1Q5JTC6 1135 aaPredicted RBP15.66■□□□□ 0.1
TRAK1-201ENST00000327628 LARP1Q6PKG0 1096 aaKnown RBP15.66■□□□□ 0.1
TRAK1-201ENST00000327628 KIF1BPQ96EK5 621 aa15.66■□□□□ 0.1
TRAK1-201ENST00000327628 U3KPZ7 1027 aaPredicted RBP15.65■□□□□ 0.1
TRAK1-201ENST00000327628 BTBD11A6QL63 1104 aa15.65■□□□□ 0.1
TRAK1-201ENST00000327628 GLRX3O76003 335 aaKnown RBP15.65■□□□□ 0.1
TRAK1-201ENST00000327628 LARP1BQ659C4 914 aaKnown RBP15.65■□□□□ 0.1
TRAK1-201ENST00000327628 ZNF397Q8NF99 534 aaPredicted RBP15.65■□□□□ 0.1
TRAK1-201ENST00000327628 SEPT7Q16181 437 aaKnown RBP15.65■□□□□ 0.1
TRAK1-201ENST00000327628 CABP1Q9NZU7 370 aa15.65■□□□□ 0.1
TRAK1-201ENST00000327628 CCDC61Q9Y6R9 512 aa15.65■□□□□ 0.1
TRAK1-201ENST00000327628 FOSBP53539 338 aa15.64■□□□□ 0.09
TRAK1-201ENST00000327628 TEX13AQ9BXU3 409 aaPredicted RBP15.64■□□□□ 0.09
TRAK1-201ENST00000327628 RAB34Q9BZG1 259 aa15.64■□□□□ 0.09
TRAK1-201ENST00000327628 ME1P48163 572 aa15.64■□□□□ 0.09
TRAK1-201ENST00000327628 PRDM11Q9NQV5 511 aa15.64■□□□□ 0.09
TRAK1-201ENST00000327628 TDO2P48775 406 aa15.64■□□□□ 0.09
TRAK1-201ENST00000327628 PPP4R3BQ5MIZ7 849 aa15.64■□□□□ 0.09
TRAK1-201ENST00000327628 AACSQ86V21 672 aa15.64■□□□□ 0.09
TRAK1-201ENST00000327628 IQGAP2Q13576 1575 aa15.63■□□□□ 0.09
TRAK1-201ENST00000327628 PRPF40AO75400 957 aaKnown RBP15.63■□□□□ 0.09
TRAK1-201ENST00000327628 RNF41Q9H4P4 317 aaPredicted RBP15.63■□□□□ 0.09
TRAK1-201ENST00000327628 FAM135AQ9P2D6 1515 aa15.63■□□□□ 0.09
TRAK1-201ENST00000327628 CTAGE5O15320 804 aa15.63■□□□□ 0.09
TRAK1-201ENST00000327628 USP8P40818 1118 aa15.63■□□□□ 0.09
TRAK1-201ENST00000327628 SPATA32Q96LK8 384 aa15.63■□□□□ 0.09
TRAK1-201ENST00000327628 LAMC3Q9Y6N6 1575 aa15.63■□□□□ 0.09
TRAK1-201ENST00000327628 TTC21BQ7Z4L5 1316 aa15.63■□□□□ 0.09
TRAK1-201ENST00000327628 IFIT1P09914 478 aaKnown RBP15.62■□□□□ 0.09
TRAK1-201ENST00000327628 SYNJ1O43426 1573 aa15.62■□□□□ 0.09
TRAK1-201ENST00000327628 PATL2C9JE40 543 aaKnown RBP15.62■□□□□ 0.09
TRAK1-201ENST00000327628 NUP62CLQ9H1M0 184 aa15.62■□□□□ 0.09
TRAK1-201ENST00000327628 ABCA10Q8WWZ4 1543 aa15.62■□□□□ 0.09
TRAK1-201ENST00000327628 PAF1Q8N7H5 531 aa15.62■□□□□ 0.09
TRAK1-201ENST00000327628 MPHOSPH10O00566 681 aaKnown RBP15.61■□□□□ 0.09
TRAK1-201ENST00000327628 FIBPO43427 364 aa15.61■□□□□ 0.09
TRAK1-201ENST00000327628 KIAA0754O94854 1291 aa15.61■□□□□ 0.09
TRAK1-201ENST00000327628 CCDC112Q8NEF3 446 aa15.61■□□□□ 0.09
TRAK1-201ENST00000327628 TAF4BQ92750 862 aa15.61■□□□□ 0.09
TRAK1-201ENST00000327628 NUTM2GQ5VZR2 741 aa15.61■□□□□ 0.09
TRAK1-201ENST00000327628 PPP4R3AQ6IN85 833 aa15.61■□□□□ 0.09
TRAK1-201ENST00000327628 STRN4Q9NRL3 753 aa15.61■□□□□ 0.09
TRAK1-201ENST00000327628 GBP2P32456 591 aaPredicted RBP15.61■□□□□ 0.09
TRAK1-201ENST00000327628 CAVIN4Q5BKX8 364 aa15.61■□□□□ 0.09
TRAK1-201ENST00000327628 TSG101Q99816 390 aa15.61■□□□□ 0.09
TRAK1-201ENST00000327628 MAGI1Q96QZ7 1491 aaPredicted RBP15.61■□□□□ 0.09
TRAK1-201ENST00000327628 NCOA1Q15788 1441 aa15.61■□□□□ 0.09
TRAK1-201ENST00000327628 SRGAP3O43295 1099 aa15.61■□□□□ 0.09
TRAK1-201ENST00000327628 KLHL34Q8N239 644 aa15.6■□□□□ 0.09
TRAK1-201ENST00000327628 TRAF1Q13077 416 aa15.6■□□□□ 0.09
TRAK1-201ENST00000327628 AIDAQ96BJ3 306 aa15.6■□□□□ 0.09
TRAK1-201ENST00000327628 SEC63Q9UGP8 760 aaKnown RBP15.6■□□□□ 0.09
TRAK1-201ENST00000327628 PTPRCP08575 1304 aa15.6■□□□□ 0.09
TRAK1-201ENST00000327628 SAMD1Q6SPF0 538 aaPredicted RBP15.6■□□□□ 0.09
TRAK1-201ENST00000327628 CCDC148Q8NFR7 591 aa15.6■□□□□ 0.09
TRAK1-201ENST00000327628 FMNL2Q96PY5 1086 aa15.6■□□□□ 0.09
TRAK1-201ENST00000327628 SCAND2PQ9GZW5 306 aaPredicted RBP15.6■□□□□ 0.09
TRAK1-201ENST00000327628 NSD3Q9BZ95 1437 aa15.6■□□□□ 0.09
TRAK1-201ENST00000327628 VPS36Q86VN1 386 aa15.6■□□□□ 0.09
TRAK1-201ENST00000327628 TANGO6Q9C0B7 1094 aa15.59■□□□□ 0.09
TRAK1-201ENST00000327628 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.59■□□□□ 0.09
TRAK1-201ENST00000327628 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.59■□□□□ 0.09
TRAK1-201ENST00000327628 AXDND1Q5T1B0 1012 aaPredicted RBP15.59■□□□□ 0.09
TRAK1-201ENST00000327628 CCDC12Q8WUD4 166 aaPredicted RBP15.59■□□□□ 0.09
TRAK1-201ENST00000327628 RAI14Q9P0K7 980 aa15.59■□□□□ 0.09
TRAK1-201ENST00000327628 ZSCAN12O43309 604 aa15.59■□□□□ 0.09
TRAK1-201ENST00000327628 ZNF76P36508 570 aa15.59■□□□□ 0.09
TRAK1-201ENST00000327628 CCDC178Q5BJE1 867 aa15.59■□□□□ 0.09
TRAK1-201ENST00000327628 UPF3BQ9BZI7 483 aaKnown RBP15.59■□□□□ 0.09
TRAK1-201ENST00000327628 LRRC27Q9C0I9 530 aa15.59■□□□□ 0.09
TRAK1-201ENST00000327628 CC2D2AQ9P2K1 1620 aa15.59■□□□□ 0.09
TRAK1-201ENST00000327628 NEMFO60524 1076 aa15.58■□□□□ 0.09
TRAK1-201ENST00000327628 NEFHP12036 1026 aa15.58■□□□□ 0.09
TRAK1-201ENST00000327628 CCDC83Q8IWF9 413 aa15.58■□□□□ 0.08
TRAK1-201ENST00000327628 AKNAQ7Z591 1439 aa15.58■□□□□ 0.08
TRAK1-201ENST00000327628 SLC12A5Q9H2X9 1139 aa15.58■□□□□ 0.08
TRAK1-201ENST00000327628 HYPKQ9NX55 129 aa15.58■□□□□ 0.08
TRAK1-201ENST00000327628 LRP2BPQ9P2M1 347 aa15.58■□□□□ 0.08
TRAK1-201ENST00000327628 CAVIN2O95810 425 aa15.58■□□□□ 0.08
TRAK1-201ENST00000327628 TTF1Q15361 905 aaPredicted RBP15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms