RNA–Protein interactions for RNA: ENST00000323926.10

FN1-201, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 8,708 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-201ENST00000323926 TRAF1Q13077 416 aa14.82□□□□□ -0.04
FN1-201ENST00000323926 SURF6O75683 361 aaKnown RBP14.82□□□□□ -0.04
FN1-201ENST00000323926 FOXD4L5Q5VV16 416 aaPredicted RBP14.82□□□□□ -0.04
FN1-201ENST00000323926 FOXD4L4Q8WXT5 416 aaPredicted RBP14.82□□□□□ -0.04
FN1-201ENST00000323926 LNPKQ9C0E8 428 aa14.82□□□□□ -0.04
FN1-201ENST00000323926 CCDC150Q8NCX0 1101 aa14.82□□□□□ -0.04
FN1-201ENST00000323926 CCDC181Q5TID7 509 aa14.82□□□□□ -0.04
FN1-201ENST00000323926 MTHFSP49914 203 aa14.81□□□□□ -0.04
FN1-201ENST00000323926 TUBB4BP68371 445 aa14.81□□□□□ -0.04
FN1-201ENST00000323926 HDGFL1Q5TGJ6 251 aa14.81□□□□□ -0.04
FN1-201ENST00000323926 PDILTQ8N807 584 aa14.81□□□□□ -0.04
FN1-201ENST00000323926 SLC26A8Q96RN1 970 aa14.81□□□□□ -0.04
FN1-201ENST00000323926 NUTM2FA1L443 756 aa14.81□□□□□ -0.04
FN1-201ENST00000323926 ANKLE2Q86XL3 938 aa14.81□□□□□ -0.04
FN1-201ENST00000323926 CCDC83Q8IWF9 413 aa14.81□□□□□ -0.04
FN1-201ENST00000323926 TWISTNBQ3B726 338 aaPredicted RBP14.81□□□□□ -0.04
FN1-201ENST00000323926 CYB5RLQ6IPT4 315 aa14.81□□□□□ -0.04
FN1-201ENST00000323926 CEP57L1Q8IYX8 460 aa14.81□□□□□ -0.04
FN1-201ENST00000323926 ELL2O00472 640 aaPredicted RBP14.8□□□□□ -0.04
FN1-201ENST00000323926 PPP4R3AQ6IN85 833 aa14.8□□□□□ -0.04
FN1-201ENST00000323926 EXOC6Q8TAG9 804 aa14.8□□□□□ -0.04
FN1-201ENST00000323926 TNMDQ9H2S6 317 aa14.8□□□□□ -0.04
FN1-201ENST00000323926 SH2B1Q9NRF2 756 aaPredicted RBP14.8□□□□□ -0.04
FN1-201ENST00000323926 SEC63Q9UGP8 760 aaKnown RBP14.8□□□□□ -0.04
FN1-201ENST00000323926 ATF7IPQ6VMQ6 1270 aa14.8□□□□□ -0.04
FN1-201ENST00000323926 TMOD2Q9NZR1 351 aa14.8□□□□□ -0.04
FN1-201ENST00000323926 ARAP1Q96P48 1450 aa14.8□□□□□ -0.04
FN1-201ENST00000323926 MPHOSPH6Q99547 160 aaKnown RBP14.8□□□□□ -0.04
FN1-201ENST00000323926 ALDH1L2Q3SY69 923 aa14.8□□□□□ -0.04
FN1-201ENST00000323926 UBAC1Q9BSL1 405 aa14.8□□□□□ -0.04
FN1-201ENST00000323926 CABP4P57796 275 aa14.79□□□□□ -0.04
FN1-201ENST00000323926 NUTM2DQ5VT03 806 aaPredicted RBP14.79□□□□□ -0.04
FN1-201ENST00000323926 GTPBP4Q9BZE4 634 aaKnown RBP14.79□□□□□ -0.04
FN1-201ENST00000323926 RUSC2Q8N2Y8 1516 aa14.79□□□□□ -0.04
FN1-201ENST00000323926 DUOX2Q9NRD8 1548 aa14.79□□□□□ -0.04
FN1-201ENST00000323926 CACNA1FO60840 1977 aa14.79□□□□□ -0.04
FN1-201ENST00000323926 GOLGA6L9A6NEM1 432 aa14.79□□□□□ -0.04
FN1-201ENST00000323926 SERPINC1P01008 464 aa14.79□□□□□ -0.04
FN1-201ENST00000323926 PRKCSHP14314 528 aaPredicted RBP14.79□□□□□ -0.04
FN1-201ENST00000323926 PAF1Q8N7H5 531 aa14.79□□□□□ -0.04
FN1-201ENST00000323926 DHX37Q8IY37 1157 aaKnown RBP14.79□□□□□ -0.04
FN1-201ENST00000323926 CCDC12Q8WUD4 166 aaPredicted RBP14.78□□□□□ -0.04
FN1-201ENST00000323926 POLR3GO15318 223 aaPredicted RBP14.78□□□□□ -0.04
FN1-201ENST00000323926 NF2P35240 595 aa14.78□□□□□ -0.04
FN1-201ENST00000323926 NEK4P51957 841 aa14.78□□□□□ -0.04
FN1-201ENST00000323926 TEX14Q8IWB6 1497 aa14.78□□□□□ -0.04
FN1-201ENST00000323926 NEMFO60524 1076 aa14.78□□□□□ -0.04
FN1-201ENST00000323926 BLOC1S2Q6QNY1 142 aa14.78□□□□□ -0.04
FN1-201ENST00000323926 TTC21BQ7Z4L5 1316 aa14.78□□□□□ -0.04
FN1-201ENST00000323926 TTC21AQ8NDW8 1320 aa14.78□□□□□ -0.04
FN1-201ENST00000323926 TRAK2O60296 914 aa14.78□□□□□ -0.04
FN1-201ENST00000323926 NEFHP12036 1026 aa14.78□□□□□ -0.04
FN1-201ENST00000323926 FERMT1Q9BQL6 677 aa14.78□□□□□ -0.04
FN1-201ENST00000323926 DDX11Q96FC9 970 aa14.78□□□□□ -0.04
FN1-201ENST00000323926 GOLGA6L10A0A0M3HER8 536 aa14.77□□□□□ -0.04
FN1-201ENST00000323926 DNAJC2Q99543 621 aaKnown RBP14.77□□□□□ -0.04
FN1-201ENST00000323926 RPAP2Q8IXW5 612 aaPredicted RBP14.77□□□□□ -0.04
FN1-201ENST00000323926 CCDC148Q8NFR7 591 aa14.77□□□□□ -0.04
FN1-201ENST00000323926 TAOK3Q9H2K8 898 aa14.77□□□□□ -0.04
FN1-201ENST00000323926 K7ELQ4 463 aaPredicted RBP14.77□□□□□ -0.04
FN1-201ENST00000323926 IGHMBP2P38935 993 aaKnown RBP14.77□□□□□ -0.04
FN1-201ENST00000323926 CETN1Q12798 172 aa14.77□□□□□ -0.04
FN1-201ENST00000323926 RNF41Q9H4P4 317 aaPredicted RBP14.77□□□□□ -0.05
FN1-201ENST00000323926 ME1P48163 572 aa14.77□□□□□ -0.05
FN1-201ENST00000323926 SCAND2PQ9GZW5 306 aaPredicted RBP14.77□□□□□ -0.05
FN1-201ENST00000323926 TSPYL1Q9H0U9 437 aa14.77□□□□□ -0.05
FN1-201ENST00000323926 PTPRCP08575 1304 aa14.77□□□□□ -0.05
FN1-201ENST00000323926 HMGB1P1B2RPK0 211 aaPredicted RBP14.77□□□□□ -0.05
FN1-201ENST00000323926 TXNDC2Q86VQ3 553 aa14.77□□□□□ -0.05
FN1-201ENST00000323926 HOOK3Q86VS8 718 aa14.77□□□□□ -0.05
FN1-201ENST00000323926 TCP11L2Q8N4U5 519 aa14.76□□□□□ -0.05
FN1-201ENST00000323926 ZSCAN12O43309 604 aa14.76□□□□□ -0.05
FN1-201ENST00000323926 FMNL3Q8IVF7 1028 aa14.76□□□□□ -0.05
FN1-201ENST00000323926 PDCL3Q9H2J4 239 aa14.76□□□□□ -0.05
FN1-201ENST00000323926 GIGYF2Q6Y7W6 1299 aaKnown RBP14.76□□□□□ -0.05
FN1-201ENST00000323926 MVPQ14764 893 aaKnown RBP14.76□□□□□ -0.05
FN1-201ENST00000323926 AXDND1Q5T1B0 1012 aaPredicted RBP14.75□□□□□ -0.05
FN1-201ENST00000323926 STXBP4Q6ZWJ1 553 aa14.75□□□□□ -0.05
FN1-201ENST00000323926 GLRX3O76003 335 aaKnown RBP14.75□□□□□ -0.05
FN1-201ENST00000323926 POTEB2H3BUK9 544 aa14.75□□□□□ -0.05
FN1-201ENST00000323926 LRRC27Q9C0I9 530 aa14.75□□□□□ -0.05
FN1-201ENST00000323926 HMOX1P09601 288 aa14.75□□□□□ -0.05
FN1-201ENST00000323926 TEX13AQ9BXU3 409 aaPredicted RBP14.75□□□□□ -0.05
FN1-201ENST00000323926 CEP126Q9P2H0 1117 aa14.75□□□□□ -0.05
FN1-201ENST00000323926 STAMBPO95630 424 aa14.75□□□□□ -0.05
FN1-201ENST00000323926 KANK3Q6NY19 840 aa14.75□□□□□ -0.05
FN1-201ENST00000323926 KIF1BPQ96EK5 621 aa14.75□□□□□ -0.05
FN1-201ENST00000323926 PPP2R1AP30153 589 aa14.74□□□□□ -0.05
FN1-201ENST00000323926 GCC2Q8IWJ2 1684 aa14.74□□□□□ -0.05
FN1-201ENST00000323926 TSG101Q99816 390 aa14.74□□□□□ -0.05
FN1-201ENST00000323926 A0A087WZG4 1122 aa14.73□□□□□ -0.05
FN1-201ENST00000323926 GNAT3A8MTJ3 354 aa14.73□□□□□ -0.05
FN1-201ENST00000323926 LARP1Q6PKG0 1096 aaKnown RBP14.73□□□□□ -0.05
FN1-201ENST00000323926 CCDC172P0C7W6 258 aa14.73□□□□□ -0.05
FN1-201ENST00000323926 CCDC178Q5BJE1 867 aa14.73□□□□□ -0.05
FN1-201ENST00000323926 TTF1Q15361 905 aaPredicted RBP14.73□□□□□ -0.05
FN1-201ENST00000323926 FMNL2Q96PY5 1086 aa14.73□□□□□ -0.05
FN1-201ENST00000323926 NCOA1Q15788 1441 aa14.73□□□□□ -0.05
FN1-201ENST00000323926 PLIN1O60240 522 aa14.73□□□□□ -0.05
FN1-201ENST00000323926 PRKAR2BP31323 418 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms