RNA–Protein interactions for RNA: ENST00000317147.9

CNOT1-201, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNOT1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-201ENST00000317147 U2AF1L5P0DN76 240 aaPredicted RBP5.33□□□□□ -1.56
CNOT1-201ENST00000317147 U2AF1Q01081 240 aaKnown RBP eCLIP5.33□□□□□ -1.564e-7■■□□□ 13.9
CNOT1-201ENST00000317147 NEXNQ0ZGT2 675 aa5.33□□□□□ -1.56
CNOT1-201ENST00000317147 MVPQ14764 893 aaKnown RBP5.33□□□□□ -1.56
CNOT1-201ENST00000317147 OLFM4Q6UX06 510 aa5.33□□□□□ -1.56
CNOT1-201ENST00000317147 CCDC150Q8NCX0 1101 aa5.33□□□□□ -1.56
CNOT1-201ENST00000317147 TRIM5Q9C035 493 aa5.33□□□□□ -1.56
CNOT1-201ENST00000317147 SETSIPP0DME0 302 aa5.33□□□□□ -1.56
CNOT1-201ENST00000317147 RTF1Q92541 710 aaKnown RBP5.32□□□□□ -1.56
CNOT1-201ENST00000317147 ZNHIT6Q9NWK9 470 aaKnown RBP5.32□□□□□ -1.56
CNOT1-201ENST00000317147 RBM10P98175 930 aaKnown RBP5.32□□□□□ -1.56
CNOT1-201ENST00000317147 EPRSP07814 1512 aaKnown RBP5.32□□□□□ -1.56
CNOT1-201ENST00000317147 WDR87Q6ZQQ6 2873 aa5.32□□□□□ -1.56
CNOT1-201ENST00000317147 ADGRL1O94910 1474 aa5.32□□□□□ -1.56
CNOT1-201ENST00000317147 HDAC1Q13547 482 aaPredicted RBP5.32□□□□□ -1.56
CNOT1-201ENST00000317147 CHMP7Q8WUX9 453 aaPredicted RBP5.32□□□□□ -1.56
CNOT1-201ENST00000317147 SLC26A8Q96RN1 970 aa5.32□□□□□ -1.56
CNOT1-201ENST00000317147 BRMS1Q9HCU9 246 aa5.32□□□□□ -1.56
CNOT1-201ENST00000317147 SYNMO15061 1565 aa5.32□□□□□ -1.56
CNOT1-201ENST00000317147 LIG1P18858 919 aa5.32□□□□□ -1.56
CNOT1-201ENST00000317147 SARNPP82979 210 aaKnown RBP5.32□□□□□ -1.56
CNOT1-201ENST00000317147 CCDC47Q96A33 483 aaKnown RBP5.32□□□□□ -1.56
CNOT1-201ENST00000317147 PANK2Q9BZ23 570 aa5.32□□□□□ -1.56
CNOT1-201ENST00000317147 TMX4Q9H1E5 349 aaPredicted RBP5.32□□□□□ -1.56
CNOT1-201ENST00000317147 CLASP1Q7Z460 1538 aa5.32□□□□□ -1.56
CNOT1-201ENST00000317147 APBB1O00213 710 aa5.32□□□□□ -1.56
CNOT1-201ENST00000317147 KRT32Q14532 448 aa5.32□□□□□ -1.56
CNOT1-201ENST00000317147 C9orf84Q5VXU9 1444 aa5.31□□□□□ -1.56
CNOT1-201ENST00000317147 FOXD4L5Q5VV16 416 aaPredicted RBP5.31□□□□□ -1.56
CNOT1-201ENST00000317147 FOXD4L4Q8WXT5 416 aaPredicted RBP5.31□□□□□ -1.56
CNOT1-201ENST00000317147 INTS4Q96HW7 963 aaKnown RBP5.31□□□□□ -1.56
CNOT1-201ENST00000317147 RASSF4Q9H2L5 321 aa5.31□□□□□ -1.56
CNOT1-201ENST00000317147 DDX19AQ9NUU7 478 aaKnown RBP5.31□□□□□ -1.56
CNOT1-201ENST00000317147 ICE1Q9Y2F5 2266 aa5.31□□□□□ -1.56
CNOT1-201ENST00000317147 TROQ12816 1431 aaPredicted RBP5.31□□□□□ -1.56
CNOT1-201ENST00000317147 SEC16AO15027 2179 aa5.31□□□□□ -1.56
CNOT1-201ENST00000317147 TDRD9Q8NDG6 1382 aaKnown RBP5.31□□□□□ -1.56
CNOT1-201ENST00000317147 XRCC6P12956 609 aaKnown RBP eCLIP5.31□□□□□ -1.56
CNOT1-201ENST00000317147 PTPN14Q15678 1187 aa5.31□□□□□ -1.56
CNOT1-201ENST00000317147 LRSAM1Q6UWE0 723 aa5.31□□□□□ -1.56
CNOT1-201ENST00000317147 ZNF397Q8NF99 534 aaPredicted RBP5.31□□□□□ -1.56
CNOT1-201ENST00000317147 MYRIPQ8NFW9 859 aa5.31□□□□□ -1.56
CNOT1-201ENST00000317147 CTCFLQ8NI51 663 aaPredicted RBP5.31□□□□□ -1.56
CNOT1-201ENST00000317147 ERLIN2O94905 339 aa5.31□□□□□ -1.56
CNOT1-201ENST00000317147 SFPQP23246 707 aaKnown RBP eCLIP5.31□□□□□ -1.56
CNOT1-201ENST00000317147 ZNF445P59923 1031 aa5.31□□□□□ -1.56
CNOT1-201ENST00000317147 ERC1Q8IUD2 1116 aa5.31□□□□□ -1.56
CNOT1-201ENST00000317147 BCAR3O75815 825 aa5.31□□□□□ -1.56
CNOT1-201ENST00000317147 AKAP17AQ02040 695 aaKnown RBP5.31□□□□□ -1.56
CNOT1-201ENST00000317147 SF3A1Q15459 793 aaKnown RBP5.31□□□□□ -1.56
CNOT1-201ENST00000317147 MAP3K11Q16584 847 aa5.31□□□□□ -1.56
CNOT1-201ENST00000317147 CCDC27Q2M243 656 aa5.31□□□□□ -1.56
CNOT1-201ENST00000317147 ATL3Q6DD88 541 aa5.31□□□□□ -1.56
CNOT1-201ENST00000317147 KIF3BO15066 747 aa5.31□□□□□ -1.56
CNOT1-201ENST00000317147 ATP8B1O43520 1251 aa5.31□□□□□ -1.56
CNOT1-201ENST00000317147 DMTNQ08495 405 aa5.31□□□□□ -1.56
CNOT1-201ENST00000317147 CCDC38Q502W7 563 aa5.31□□□□□ -1.56
CNOT1-201ENST00000317147 GNAI3P08754 354 aa5.3□□□□□ -1.56
CNOT1-201ENST00000317147 MEX3CQ5U5Q3 659 aaKnown RBP5.3□□□□□ -1.56
CNOT1-201ENST00000317147 RPAINQ86UA6 219 aa5.3□□□□□ -1.56
CNOT1-201ENST00000317147 POTEDQ86YR6 584 aa5.3□□□□□ -1.56
CNOT1-201ENST00000317147 BBXQ8WY36 941 aaPredicted RBP5.3□□□□□ -1.56
CNOT1-201ENST00000317147 PPM1EQ8WY54 764 aa5.3□□□□□ -1.56
CNOT1-201ENST00000317147 SDK1Q7Z5N4 2213 aa5.3□□□□□ -1.56
CNOT1-201ENST00000317147 SYNJ2O15056 1496 aa5.3□□□□□ -1.56
CNOT1-201ENST00000317147 SMC2O95347 1197 aa5.3□□□□□ -1.56
CNOT1-201ENST00000317147 UBE2HP62256 183 aa5.3□□□□□ -1.56
CNOT1-201ENST00000317147 DIDO1Q9BTC0 2240 aaKnown RBP5.3□□□□□ -1.56
CNOT1-201ENST00000317147 PRPF40AO75400 957 aaKnown RBP5.3□□□□□ -1.56
CNOT1-201ENST00000317147 ANKRD45Q5TZF3 282 aa5.3□□□□□ -1.56
CNOT1-201ENST00000317147 EFCC1Q9HA90 598 aa5.3□□□□□ -1.56
CNOT1-201ENST00000317147 ANKRD18BA2A2Z9 1011 aa5.3□□□□□ -1.56
CNOT1-201ENST00000317147 PPFIA3O75145 1194 aa5.3□□□□□ -1.56
CNOT1-201ENST00000317147 PYM1Q9BRP8 204 aaKnown RBP5.3□□□□□ -1.56
CNOT1-201ENST00000317147 ARHGAP45Q92619 1136 aa5.3□□□□□ -1.56
CNOT1-201ENST00000317147 RAB3GAP1Q15042 981 aa5.3□□□□□ -1.56
CNOT1-201ENST00000317147 ZNF622Q969S3 477 aaKnown RBP eCLIP5.3□□□□□ -1.566e-7■□□□□ 9.1
CNOT1-201ENST00000317147 TRIM6-TRIM34B2RNG4 842 aa5.29□□□□□ -1.56
CNOT1-201ENST00000317147 SAMD9Q5K651 1589 aa5.29□□□□□ -1.56
CNOT1-201ENST00000317147 HOMEZQ8IX15 550 aa5.29□□□□□ -1.56
CNOT1-201ENST00000317147 A0A1B0GUA9 196 aa5.29□□□□□ -1.56
CNOT1-201ENST00000317147 KIF1CO43896 1103 aaKnown RBP5.29□□□□□ -1.56
CNOT1-201ENST00000317147 BICD2Q8TD16 824 aa5.29□□□□□ -1.56
CNOT1-201ENST00000317147 NUP205Q92621 2012 aa5.29□□□□□ -1.56
CNOT1-201ENST00000317147 FILIP1LQ4L180 1135 aa5.29□□□□□ -1.56
CNOT1-201ENST00000317147 UTP14AQ9BVJ6 771 aaKnown RBP5.29□□□□□ -1.56
CNOT1-201ENST00000317147 BCCIPQ9P287 314 aaKnown RBP eCLIP5.29□□□□□ -1.56
CNOT1-201ENST00000317147 FAM186AA6NE01 2351 aa5.29□□□□□ -1.56
CNOT1-201ENST00000317147 RTTNQ86VV8 2226 aa5.29□□□□□ -1.56
CNOT1-201ENST00000317147 FSD2A1L4K1 749 aa5.29□□□□□ -1.56
CNOT1-201ENST00000317147 TRDNQ13061 729 aa5.29□□□□□ -1.56
CNOT1-201ENST00000317147 PPP4R3BQ5MIZ7 849 aa5.29□□□□□ -1.56
CNOT1-201ENST00000317147 ATF7IPQ6VMQ6 1270 aa5.29□□□□□ -1.56
CNOT1-201ENST00000317147 DDX12PQ92771 950 aa5.29□□□□□ -1.56
CNOT1-201ENST00000317147 KDM5CP41229 1560 aa5.29□□□□□ -1.56
CNOT1-201ENST00000317147 ARID1AO14497 2285 aa5.29□□□□□ -1.56
CNOT1-201ENST00000317147 A0A1B0GUL7 405 aa5.29□□□□□ -1.56
CNOT1-201ENST00000317147 HOXA7P31268 230 aaPredicted RBP5.29□□□□□ -1.56
CNOT1-201ENST00000317147 CCT4P50991 539 aaKnown RBP5.29□□□□□ -1.56
CNOT1-201ENST00000317147 RPAP2Q8IXW5 612 aaPredicted RBP5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms