RNA–Protein interactions for RNA: ENST00000312438.7

CLCF1-201, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCF1, Length 1,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-201ENST00000312438 CRB1P82279 1406 aa21.47■■□□□ 1.03
CLCF1-201ENST00000312438 TWISTNBQ3B726 338 aaPredicted RBP21.47■■□□□ 1.03
CLCF1-201ENST00000312438 TSPYL6Q8N831 410 aa21.47■■□□□ 1.03
CLCF1-201ENST00000312438 IPO8O15397 1037 aaKnown RBP21.46■■□□□ 1.03
CLCF1-201ENST00000312438 HAP1P54257 671 aaPredicted RBP21.46■■□□□ 1.03
CLCF1-201ENST00000312438 AAMPQ13685 434 aa21.45■■□□□ 1.03
CLCF1-201ENST00000312438 C8orf58Q8NAV2 365 aa21.45■■□□□ 1.03
CLCF1-201ENST00000312438 COG6Q9Y2V7 657 aa21.45■■□□□ 1.03
CLCF1-201ENST00000312438 DLG5Q8TDM6 1919 aa21.45■■□□□ 1.02
CLCF1-201ENST00000312438 AMOTQ4VCS5 1084 aa21.45■■□□□ 1.02
CLCF1-201ENST00000312438 PLEKHO1Q53GL0 409 aaPredicted RBP21.45■■□□□ 1.02
CLCF1-201ENST00000312438 ERBB3P21860 1342 aa21.45■■□□□ 1.02
CLCF1-201ENST00000312438 KIF16BQ96L93 1317 aa21.45■■□□□ 1.02
CLCF1-201ENST00000312438 MAP3K5Q99683 1374 aa21.44■■□□□ 1.02
CLCF1-201ENST00000312438 DZIP1LQ8IYY4 767 aaKnown RBP21.44■■□□□ 1.02
CLCF1-201ENST00000312438 NOB1Q9ULX3 412 aaKnown RBP21.44■■□□□ 1.02
CLCF1-201ENST00000312438 NCAPD2Q15021 1401 aa21.43■■□□□ 1.02
CLCF1-201ENST00000312438 ELL2O00472 640 aaPredicted RBP21.43■■□□□ 1.02
CLCF1-201ENST00000312438 ATF7IPQ6VMQ6 1270 aa21.43■■□□□ 1.02
CLCF1-201ENST00000312438 CPDO75976 1380 aa21.43■■□□□ 1.02
CLCF1-201ENST00000312438 KIAA0232Q92628 1395 aa21.42■■□□□ 1.02
CLCF1-201ENST00000312438 RLBP1P12271 317 aa21.42■■□□□ 1.02
CLCF1-201ENST00000312438 FTSJ3Q8IY81 847 aaKnown RBP21.42■■□□□ 1.02
CLCF1-201ENST00000312438 IL17REQ8NFR9 667 aa21.42■■□□□ 1.02
CLCF1-201ENST00000312438 CLUAP1Q96AJ1 413 aa21.42■■□□□ 1.02
CLCF1-201ENST00000312438 BABAM1Q9NWV8 329 aa21.41■■□□□ 1.02
CLCF1-201ENST00000312438 TRIM27P14373 513 aa21.41■■□□□ 1.02
CLCF1-201ENST00000312438 MRPL50Q8N5N7 158 aaKnown RBP21.41■■□□□ 1.02
CLCF1-201ENST00000312438 TSPYL4Q9UJ04 414 aa21.41■■□□□ 1.02
CLCF1-201ENST00000312438 TNNQ9UQP3 1299 aa21.41■■□□□ 1.02
CLCF1-201ENST00000312438 ARHGAP45Q92619 1136 aa21.4■■□□□ 1.02
CLCF1-201ENST00000312438 TSHZ2Q9NRE2 1034 aa21.4■■□□□ 1.02
CLCF1-201ENST00000312438 AKAP4Q5JQC9 854 aa21.39■■□□□ 1.02
CLCF1-201ENST00000312438 MVPQ14764 893 aaKnown RBP21.39■■□□□ 1.01
CLCF1-201ENST00000312438 TAF7Q15545 349 aaPredicted RBP21.39■■□□□ 1.01
CLCF1-201ENST00000312438 CHRNA2Q15822 529 aa21.39■■□□□ 1.01
CLCF1-201ENST00000312438 NLRP2Q9NX02 1062 aa21.39■■□□□ 1.01
CLCF1-201ENST00000312438 MIS18AQ9NYP9 233 aa21.39■■□□□ 1.01
CLCF1-201ENST00000312438 ABCC6O95255 1503 aa21.37■■□□□ 1.01
CLCF1-201ENST00000312438 CSB-PGBD3P0DP91 1061 aa21.37■■□□□ 1.01
CLCF1-201ENST00000312438 ZNF530Q6P9A1 599 aaPredicted RBP21.37■■□□□ 1.01
CLCF1-201ENST00000312438 CENPQQ7L2Z9 268 aaPredicted RBP21.36■■□□□ 1.01
CLCF1-201ENST00000312438 KDM2BQ8NHM5 1336 aa21.35■■□□□ 1.01
CLCF1-201ENST00000312438 C1orf141Q5JVX7 400 aa21.35■■□□□ 1.01
CLCF1-201ENST00000312438 RAPGEF4Q8WZA2 1011 aa21.35■■□□□ 1.01
CLCF1-201ENST00000312438 PRDM11Q9NQV5 511 aa21.35■■□□□ 1.01
CLCF1-201ENST00000312438 CEMIPQ8WUJ3 1361 aa21.35■■□□□ 1.01
CLCF1-201ENST00000312438 KRT24Q2M2I5 525 aa21.34■■□□□ 1.01
CLCF1-201ENST00000312438 DDX19BQ9UMR2 479 aa21.34■■□□□ 1.01
CLCF1-201ENST00000312438 LGR6Q9HBX8 967 aa21.33■■□□□ 1.01
CLCF1-201ENST00000312438 TATP17735 454 aaPredicted RBP21.32■■□□□ 1
CLCF1-201ENST00000312438 TCERG1O14776 1098 aaKnown RBP21.32■■□□□ 1
CLCF1-201ENST00000312438 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.32■■□□□ 1
CLCF1-201ENST00000312438 SOS1Q07889 1333 aaPredicted RBP21.31■■□□□ 1
CLCF1-201ENST00000312438 CAMTA1Q9Y6Y1 1673 aa21.31■■□□□ 1
CLCF1-201ENST00000312438 ITPRIPQ8IWB1 547 aa21.31■■□□□ 1
CLCF1-201ENST00000312438 TMEM57Q8N5G2 664 aa21.31■■□□□ 1
CLCF1-201ENST00000312438 API5Q9BZZ5 524 aaKnown RBP21.31■■□□□ 1
CLCF1-201ENST00000312438 COL18A1P39060 1754 aa21.31■■□□□ 1
CLCF1-201ENST00000312438 LTBP4Q8N2S1 1624 aa21.3■■□□□ 1
CLCF1-201ENST00000312438 PLEKHG2Q9H7P9 1386 aa21.3■■□□□ 1
CLCF1-201ENST00000312438 CRYBG1Q9Y4K1 1723 aa21.3■■□□□ 1
CLCF1-201ENST00000312438 RNMTO43148 476 aaKnown RBP21.29■■□□□ 1
CLCF1-201ENST00000312438 MPRIPQ6WCQ1 1025 aa21.29■■□□□ 1
CLCF1-201ENST00000312438 SPG7Q9UQ90 795 aa21.29■■□□□ 1
CLCF1-201ENST00000312438 TEFQ10587 303 aa21.29■■□□□ 1
CLCF1-201ENST00000312438 RGPD2P0DJD1 1756 aa21.28■■□□□ 1
CLCF1-201ENST00000312438 LMO7Q8WWI1 1683 aa21.28■■□□□ 1
CLCF1-201ENST00000312438 CHMP4BQ9H444 224 aaKnown RBP21.28■■□□□ 1
CLCF1-201ENST00000312438 NHSL1Q5SYE7 1610 aa21.28■■□□□ 1
CLCF1-201ENST00000312438 LRRC37A3O60309 1634 aa21.27■■□□□ 1
CLCF1-201ENST00000312438 IGHDP01880 384 aa21.27■□□□□ 0.99
CLCF1-201ENST00000312438 PCDHB15Q9Y5E8 787 aa21.27■□□□□ 0.99
CLCF1-201ENST00000312438 WDR17Q8IZU2 1322 aa21.26■□□□□ 0.99
CLCF1-201ENST00000312438 OVOS2A0A0G2JMS6 1433 aa21.25■□□□□ 0.99
CLCF1-201ENST00000312438 SLC4A2P04920 1241 aa21.25■□□□□ 0.99
CLCF1-201ENST00000312438 RGPD5Q99666 1765 aa21.25■□□□□ 0.99
CLCF1-201ENST00000312438 BTBD11A6QL63 1104 aa21.25■□□□□ 0.99
CLCF1-201ENST00000312438 CCDC30Q5VVM6 783 aa21.25■□□□□ 0.99
CLCF1-201ENST00000312438 TOM1L2Q6ZVM7 507 aa21.25■□□□□ 0.99
CLCF1-201ENST00000312438 RWDD1Q9H446 243 aaPredicted RBP21.25■□□□□ 0.99
CLCF1-201ENST00000312438 ABCC4O15439 1325 aa21.24■□□□□ 0.99
CLCF1-201ENST00000312438 PTPRCP08575 1304 aa21.24■□□□□ 0.99
CLCF1-201ENST00000312438 CHMP4AQ9BY43 222 aa21.24■□□□□ 0.99
CLCF1-201ENST00000312438 ZBTB40Q9NUA8 1239 aa21.24■□□□□ 0.99
CLCF1-201ENST00000312438 IFNL2Q8IZJ0 200 aa21.23■□□□□ 0.99
CLCF1-201ENST00000312438 STK31Q9BXU1 1019 aa21.23■□□□□ 0.99
CLCF1-201ENST00000312438 PHKG2P15735 406 aa21.22■□□□□ 0.99
CLCF1-201ENST00000312438 EVA1CP58658 441 aa21.22■□□□□ 0.99
CLCF1-201ENST00000312438 EIF4A1P60842 406 aaKnown RBP21.22■□□□□ 0.99
CLCF1-201ENST00000312438 ZBTB7BO15156 539 aaPredicted RBP21.22■□□□□ 0.99
CLCF1-201ENST00000312438 HOXB7P09629 217 aa21.21■□□□□ 0.99
CLCF1-201ENST00000312438 CARD10Q9BWT7 1032 aa21.2■□□□□ 0.98
CLCF1-201ENST00000312438 MEGF6O75095 1541 aa21.2■□□□□ 0.98
CLCF1-201ENST00000312438 FAM208AQ9UK61 1670 aaKnown RBP21.2■□□□□ 0.98
CLCF1-201ENST00000312438 COL5A2P05997 1499 aaPredicted RBP21.2■□□□□ 0.98
CLCF1-201ENST00000312438 TOM1O60784 492 aa21.2■□□□□ 0.98
CLCF1-201ENST00000312438 HSP90AB1P08238 724 aaKnown RBP21.19■□□□□ 0.98
CLCF1-201ENST00000312438 INTS3Q68E01 1043 aaKnown RBP21.19■□□□□ 0.98
CLCF1-201ENST00000312438 AHDC1Q5TGY3 1603 aaPredicted RBP21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 467.6 ms