RNA–Protein interactions for RNA: ENST00000272102.9

ARF1-201, Transcript of ADP ribosylation factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ARF1, Length 1,888 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARF1-201ENST00000272102 THSD7AQ9UPZ6 1657 aa14.5□□□□□ -0.09
ARF1-201ENST00000272102 CCER2I3L3R5 266 aa14.5□□□□□ -0.09
ARF1-201ENST00000272102 RTL5Q5HYW3 569 aaPredicted RBP14.5□□□□□ -0.09
ARF1-201ENST00000272102 BARGINQ6ZT62 677 aa14.5□□□□□ -0.09
ARF1-201ENST00000272102 BRWD3Q6RI45 1802 aa14.49□□□□□ -0.09
ARF1-201ENST00000272102 DISP2A7MBM2 1401 aa14.49□□□□□ -0.09
ARF1-201ENST00000272102 ONECUT3O60422 494 aaPredicted RBP14.49□□□□□ -0.09
ARF1-201ENST00000272102 DIAPH1O60610 1272 aaKnown RBP14.49□□□□□ -0.09
ARF1-201ENST00000272102 HMOX1P09601 288 aa14.49□□□□□ -0.09
ARF1-201ENST00000272102 WNK3Q9BYP7 1800 aa14.48□□□□□ -0.09
ARF1-201ENST00000272102 U2SURPO15042 1029 aaKnown RBP14.48□□□□□ -0.09
ARF1-201ENST00000272102 IGSF1Q8N6C5 1336 aa14.48□□□□□ -0.09
ARF1-201ENST00000272102 ANP32CO43423 234 aa14.48□□□□□ -0.09
ARF1-201ENST00000272102 THRAP3Q9Y2W1 955 aaKnown RBP14.48□□□□□ -0.09
ARF1-201ENST00000272102 RGPD1P0DJD0 1748 aa14.48□□□□□ -0.09
ARF1-201ENST00000272102 LRRC37A3O60309 1634 aa14.47□□□□□ -0.09
ARF1-201ENST00000272102 IL2RBP14784 551 aa14.47□□□□□ -0.09
ARF1-201ENST00000272102 SULT6B1Q6IMI4 303 aa14.47□□□□□ -0.09
ARF1-201ENST00000272102 CFAP53Q96M91 514 aa14.46□□□□□ -0.09
ARF1-201ENST00000272102 NCAPD2Q15021 1401 aa14.46□□□□□ -0.09
ARF1-201ENST00000272102 PKNOX2Q96KN3 472 aa14.45□□□□□ -0.1
ARF1-201ENST00000272102 PARP4Q9UKK3 1724 aaKnown RBP14.45□□□□□ -0.1
ARF1-201ENST00000272102 DDB1Q16531 1140 aa14.44□□□□□ -0.1
ARF1-201ENST00000272102 RAPGEF4Q8WZA2 1011 aa14.44□□□□□ -0.1
ARF1-201ENST00000272102 UPF1Q92900 1129 aaKnown RBP eCLIP14.44□□□□□ -0.16e-56■■■■■ 71.8
ARF1-201ENST00000272102 OVOS2A0A0G2JMS6 1433 aa14.43□□□□□ -0.1
ARF1-201ENST00000272102 U2AF1L5P0DN76 240 aaPredicted RBP14.43□□□□□ -0.1
ARF1-201ENST00000272102 U2AF1Q01081 240 aaKnown RBP eCLIP14.43□□□□□ -0.1
ARF1-201ENST00000272102 NBR1Q14596 966 aa14.43□□□□□ -0.1
ARF1-201ENST00000272102 KRT27Q7Z3Y8 459 aa14.43□□□□□ -0.1
ARF1-201ENST00000272102 MARCH10Q8NA82 808 aaPredicted RBP14.43□□□□□ -0.1
ARF1-201ENST00000272102 IL27Q8NEV9 243 aa14.43□□□□□ -0.1
ARF1-201ENST00000272102 DDX54Q8TDD1 881 aaKnown RBP14.43□□□□□ -0.1
ARF1-201ENST00000272102 KDRP35968 1356 aa14.42□□□□□ -0.1
ARF1-201ENST00000272102 TNS2Q63HR2 1409 aa14.42□□□□□ -0.1
ARF1-201ENST00000272102 TATP17735 454 aaPredicted RBP14.42□□□□□ -0.1
ARF1-201ENST00000272102 PDE3BQ13370 1112 aa14.42□□□□□ -0.1
ARF1-201ENST00000272102 SHANK3Q9BYB0 1731 aa14.41□□□□□ -0.1
ARF1-201ENST00000272102 EXOC5O00471 708 aa14.41□□□□□ -0.1
ARF1-201ENST00000272102 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.41□□□□□ -0.1
ARF1-201ENST00000272102 ZCRB1Q8TBF4 217 aaKnown RBP14.4□□□□□ -0.1
ARF1-201ENST00000272102 CDCA7Q9BWT1 371 aaPredicted RBP14.4□□□□□ -0.1
ARF1-201ENST00000272102 RSPH6AQ9H0K4 717 aa14.4□□□□□ -0.1
ARF1-201ENST00000272102 PPP4R2Q9NY27 417 aa14.4□□□□□ -0.1
ARF1-201ENST00000272102 CYP27B1O15528 508 aa14.39□□□□□ -0.11
ARF1-201ENST00000272102 PRKAR2BP31323 418 aa14.39□□□□□ -0.11
ARF1-201ENST00000272102 PTF1AQ7RTS3 328 aa14.39□□□□□ -0.11
ARF1-201ENST00000272102 PHACTR3Q96KR7 559 aa14.39□□□□□ -0.11
ARF1-201ENST00000272102 MRS2Q9HD23 443 aa14.39□□□□□ -0.11
ARF1-201ENST00000272102 NUDCQ9Y266 331 aa14.39□□□□□ -0.11
ARF1-201ENST00000272102 SENP3-EIF4A1A0A087X0R7 540 aa14.38□□□□□ -0.11
ARF1-201ENST00000272102 PKD1L3Q7Z443 1732 aa14.37□□□□□ -0.11
ARF1-201ENST00000272102 ADAMTS8Q9UP79 889 aa14.37□□□□□ -0.11
ARF1-201ENST00000272102 CCDC146Q8IYE0 955 aa14.36□□□□□ -0.11
ARF1-201ENST00000272102 ACSBG1Q96GR2 724 aa14.36□□□□□ -0.11
ARF1-201ENST00000272102 MTHFSDQ2M296 383 aaKnown RBP14.35□□□□□ -0.11
ARF1-201ENST00000272102 SRCAPQ6ZRS2 3230 aa14.35□□□□□ -0.11
ARF1-201ENST00000272102 PCDH11XQ9BZA7 1347 aa14.35□□□□□ -0.11
ARF1-201ENST00000272102 PCDH11YQ9BZA8 1340 aa14.35□□□□□ -0.11
ARF1-201ENST00000272102 KCNQ2O43526 872 aa14.35□□□□□ -0.11
ARF1-201ENST00000272102 ZNF530Q6P9A1 599 aaPredicted RBP14.35□□□□□ -0.11
ARF1-201ENST00000272102 TRIM37O94972 964 aa14.34□□□□□ -0.11
ARF1-201ENST00000272102 WDR43Q15061 677 aaKnown RBP eCLIP14.34□□□□□ -0.11
ARF1-201ENST00000272102 SPG7Q9UQ90 795 aa14.34□□□□□ -0.11
ARF1-201ENST00000272102 FCHSD2O94868 740 aa14.33□□□□□ -0.11
ARF1-201ENST00000272102 PHKG2P15735 406 aa14.33□□□□□ -0.11
ARF1-201ENST00000272102 PLEKHO1Q53GL0 409 aaPredicted RBP14.33□□□□□ -0.11
ARF1-201ENST00000272102 PLEKHF1Q96S99 279 aa14.33□□□□□ -0.11
ARF1-201ENST00000272102 KAT6BQ8WYB5 2073 aa14.33□□□□□ -0.12
ARF1-201ENST00000272102 FAM196AQ6ZSG2 479 aa14.32□□□□□ -0.12
ARF1-201ENST00000272102 PNISRQ8TF01 805 aaKnown RBP14.32□□□□□ -0.12
ARF1-201ENST00000272102 IPO9Q96P70 1041 aaKnown RBP14.32□□□□□ -0.12
ARF1-201ENST00000272102 RTN4Q9NQC3 1192 aaKnown RBP14.32□□□□□ -0.12
ARF1-201ENST00000272102 TOGARAM1Q9Y4F4 1720 aa14.31□□□□□ -0.12
ARF1-201ENST00000272102 MPRIPQ6WCQ1 1025 aa14.31□□□□□ -0.12
ARF1-201ENST00000272102 SYTL4Q96C24 671 aaPredicted RBP14.31□□□□□ -0.12
ARF1-201ENST00000272102 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.31□□□□□ -0.12
ARF1-201ENST00000272102 DAXXQ9UER7 740 aaPredicted RBP14.31□□□□□ -0.12
ARF1-201ENST00000272102 DOT1LQ8TEK3 1739 aa14.31□□□□□ -0.12
ARF1-201ENST00000272102 ANP32AP39687 249 aaKnown RBP14.31□□□□□ -0.12
ARF1-201ENST00000272102 GLIPR1L2Q4G1C9 344 aa14.31□□□□□ -0.12
ARF1-201ENST00000272102 AMOTQ4VCS5 1084 aa14.31□□□□□ -0.12
ARF1-201ENST00000272102 FAM9BQ8IZU0 186 aa14.31□□□□□ -0.12
ARF1-201ENST00000272102 SBF2Q86WG5 1849 aa14.3□□□□□ -0.12
ARF1-201ENST00000272102 KDM6AO15550 1401 aaPredicted RBP14.3□□□□□ -0.12
ARF1-201ENST00000272102 PRIM1P49642 420 aaKnown RBP14.3□□□□□ -0.12
ARF1-201ENST00000272102 IFNL2Q8IZJ0 200 aa14.3□□□□□ -0.12
ARF1-201ENST00000272102 RRP7AQ9Y3A4 280 aaKnown RBP14.3□□□□□ -0.12
ARF1-201ENST00000272102 LGR6Q9HBX8 967 aa14.29□□□□□ -0.12
ARF1-201ENST00000272102 C1orf141Q5JVX7 400 aa14.29□□□□□ -0.12
ARF1-201ENST00000272102 ZBTB47Q9UFB7 747 aaPredicted RBP14.29□□□□□ -0.12
ARF1-201ENST00000272102 DCTN1Q14203 1278 aa14.28□□□□□ -0.12
ARF1-201ENST00000272102 NEUROD2Q15784 382 aa14.28□□□□□ -0.12
ARF1-201ENST00000272102 NKX1-1Q15270 411 aaPredicted RBP14.27□□□□□ -0.12
ARF1-201ENST00000272102 DEFB132Q7Z7B7 95 aa14.27□□□□□ -0.12
ARF1-201ENST00000272102 MAPK8IP3Q9UPT6 1336 aa14.27□□□□□ -0.12
ARF1-201ENST00000272102 TNS1Q9HBL0 1735 aaKnown RBP14.27□□□□□ -0.13
ARF1-201ENST00000272102 BCL9O00512 1426 aa14.27□□□□□ -0.13
ARF1-201ENST00000272102 AKAP4Q5JQC9 854 aa14.27□□□□□ -0.13
ARF1-201ENST00000272102 MCM10Q7L590 875 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms