RNA–Protein interactions for RNA: ENST00000267260.4

SRRM4-201, Transcript of serine/arginine repetitive matrix 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRRM4, Length 8,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4-201ENST00000267260 DDX12PQ92771 950 aa14.12□□□□□ -0.15
SRRM4-201ENST00000267260 NUTM2DQ5VT03 806 aaPredicted RBP14.12□□□□□ -0.15
SRRM4-201ENST00000267260 HOOK3Q86VS8 718 aa14.12□□□□□ -0.15
SRRM4-201ENST00000267260 CCDC150Q8NCX0 1101 aa14.12□□□□□ -0.15
SRRM4-201ENST00000267260 UBE4AQ14139 1066 aa14.11□□□□□ -0.15
SRRM4-201ENST00000267260 DHX57Q6P158 1386 aaKnown RBP14.11□□□□□ -0.15
SRRM4-201ENST00000267260 NAA15Q9BXJ9 866 aaKnown RBP14.11□□□□□ -0.15
SRRM4-201ENST00000267260 LARP1BQ659C4 914 aaKnown RBP14.11□□□□□ -0.15
SRRM4-201ENST00000267260 ZWINTO95229 277 aa14.11□□□□□ -0.15
SRRM4-201ENST00000267260 ATP2B1P20020 1258 aa14.11□□□□□ -0.15
SRRM4-201ENST00000267260 MTMR7Q9Y216 660 aa14.11□□□□□ -0.15
SRRM4-201ENST00000267260 GAS2L2Q8NHY3 880 aa14.11□□□□□ -0.15
SRRM4-201ENST00000267260 FYCO1Q9BQS8 1478 aa14.11□□□□□ -0.15
SRRM4-201ENST00000267260 CCT4P50991 539 aaKnown RBP14.11□□□□□ -0.15
SRRM4-201ENST00000267260 PLEKHH1Q9ULM0 1364 aa14.11□□□□□ -0.15
SRRM4-201ENST00000267260 GOPCQ9HD26 462 aa14.1□□□□□ -0.15
SRRM4-201ENST00000267260 MAP3K11Q16584 847 aa14.1□□□□□ -0.15
SRRM4-201ENST00000267260 CCDC88BA6NC98 1476 aa14.1□□□□□ -0.15
SRRM4-201ENST00000267260 CTR9Q6PD62 1173 aa14.1□□□□□ -0.15
SRRM4-201ENST00000267260 DDX46Q7L014 1031 aaKnown RBP14.1□□□□□ -0.15
SRRM4-201ENST00000267260 ZSCAN31Q96LW9 406 aaPredicted RBP14.1□□□□□ -0.15
SRRM4-201ENST00000267260 CTNNA3Q9UI47 895 aa14.1□□□□□ -0.15
SRRM4-201ENST00000267260 GSTTP1A0A1W2PQM5 241 aa14.1□□□□□ -0.15
SRRM4-201ENST00000267260 SURF6O75683 361 aaKnown RBP14.1□□□□□ -0.15
SRRM4-201ENST00000267260 TNNT1P13805 278 aa14.1□□□□□ -0.15
SRRM4-201ENST00000267260 IVLP07476 585 aa14.09□□□□□ -0.15
SRRM4-201ENST00000267260 SFPQP23246 707 aaKnown RBP eCLIP14.09□□□□□ -0.15
SRRM4-201ENST00000267260 SSR1P43307 286 aaKnown RBP14.09□□□□□ -0.15
SRRM4-201ENST00000267260 HSPA4P34932 840 aa14.09□□□□□ -0.15
SRRM4-201ENST00000267260 SETSIPP0DME0 302 aa14.09□□□□□ -0.15
SRRM4-201ENST00000267260 AIMP1Q12904 312 aaKnown RBP14.09□□□□□ -0.15
SRRM4-201ENST00000267260 FKBP15Q5T1M5 1219 aa14.09□□□□□ -0.15
SRRM4-201ENST00000267260 MINK1Q8N4C8 1332 aaPredicted RBP14.09□□□□□ -0.15
SRRM4-201ENST00000267260 TNIP1Q15025 636 aa14.09□□□□□ -0.15
SRRM4-201ENST00000267260 SREK1Q8WXA9 508 aaKnown RBP14.09□□□□□ -0.15
SRRM4-201ENST00000267260 CNNM1Q9NRU3 951 aa14.09□□□□□ -0.15
SRRM4-201ENST00000267260 ZNF287Q9HBT7 754 aa14.09□□□□□ -0.15
SRRM4-201ENST00000267260 FERP16591 822 aa14.09□□□□□ -0.15
SRRM4-201ENST00000267260 PDE3AQ14432 1141 aa14.09□□□□□ -0.15
SRRM4-201ENST00000267260 SMARCC1Q92922 1105 aaPredicted RBP14.09□□□□□ -0.15
SRRM4-201ENST00000267260 TSG101Q99816 390 aa14.09□□□□□ -0.15
SRRM4-201ENST00000267260 BBXQ8WY36 941 aaPredicted RBP14.08□□□□□ -0.16
SRRM4-201ENST00000267260 NAP1L3Q99457 506 aaPredicted RBP14.08□□□□□ -0.16
SRRM4-201ENST00000267260 PANK1Q8TE04 598 aa14.08□□□□□ -0.16
SRRM4-201ENST00000267260 PPP6R1Q9UPN7 881 aa14.08□□□□□ -0.16
SRRM4-201ENST00000267260 CFAP100Q494V2 611 aa14.08□□□□□ -0.16
SRRM4-201ENST00000267260 CPSF2Q9P2I0 782 aaKnown RBP14.07□□□□□ -0.16
SRRM4-201ENST00000267260 KIF21BO75037 1637 aa14.07□□□□□ -0.16
SRRM4-201ENST00000267260 HMGB2P26583 209 aaKnown RBP14.07□□□□□ -0.16
SRRM4-201ENST00000267260 GTF2F1P35269 517 aaKnown RBP eCLIP14.07□□□□□ -0.16
SRRM4-201ENST00000267260 USO1O60763 962 aaKnown RBP14.07□□□□□ -0.16
SRRM4-201ENST00000267260 GOLGA6L9A6NEM1 432 aa14.07□□□□□ -0.16
SRRM4-201ENST00000267260 ATP2B2Q01814 1243 aa14.07□□□□□ -0.16
SRRM4-201ENST00000267260 PAFAH1B1P43034 410 aa14.07□□□□□ -0.16
SRRM4-201ENST00000267260 FERMT1Q9BQL6 677 aa14.06□□□□□ -0.16
SRRM4-201ENST00000267260 MPHOSPH10O00566 681 aaKnown RBP14.06□□□□□ -0.16
SRRM4-201ENST00000267260 NEMFO60524 1076 aa14.06□□□□□ -0.16
SRRM4-201ENST00000267260 CTAGE5O15320 804 aa14.06□□□□□ -0.16
SRRM4-201ENST00000267260 BLOC1S2Q6QNY1 142 aa14.06□□□□□ -0.16
SRRM4-201ENST00000267260 CCDC178Q5BJE1 867 aa14.06□□□□□ -0.16
SRRM4-201ENST00000267260 UBE2Q2Q8WVN8 375 aa14.06□□□□□ -0.16
SRRM4-201ENST00000267260 KIF3CO14782 793 aa14.06□□□□□ -0.16
SRRM4-201ENST00000267260 PPP4R3AQ6IN85 833 aa14.06□□□□□ -0.16
SRRM4-201ENST00000267260 PHAXQ9H814 394 aaKnown RBP14.06□□□□□ -0.16
SRRM4-201ENST00000267260 ATF3P18847 181 aa14.05□□□□□ -0.16
SRRM4-201ENST00000267260 NOL3O60936 208 aaKnown RBP14.05□□□□□ -0.16
SRRM4-201ENST00000267260 CCDC160A6NGH7 325 aa14.05□□□□□ -0.16
SRRM4-201ENST00000267260 SWAP70Q9UH65 585 aa14.05□□□□□ -0.16
SRRM4-201ENST00000267260 FHOD3Q2V2M9 1422 aa14.05□□□□□ -0.16
SRRM4-201ENST00000267260 ZNF76P36508 570 aa14.05□□□□□ -0.16
SRRM4-201ENST00000267260 SPECC1Q5M775 1068 aa14.05□□□□□ -0.16
SRRM4-201ENST00000267260 UBAC1Q9BSL1 405 aa14.05□□□□□ -0.16
SRRM4-201ENST00000267260 MYOM3Q5VTT5 1437 aa14.04□□□□□ -0.16
SRRM4-201ENST00000267260 PPP4R3BQ5MIZ7 849 aa14.04□□□□□ -0.16
SRRM4-201ENST00000267260 ANKS4BQ8N8V4 417 aa14.04□□□□□ -0.16
SRRM4-201ENST00000267260 CEP112Q8N8E3 955 aa14.04□□□□□ -0.16
SRRM4-201ENST00000267260 RAB34Q9BZG1 259 aa14.04□□□□□ -0.16
SRRM4-201ENST00000267260 DYNC1I1O14576 645 aa14.04□□□□□ -0.16
SRRM4-201ENST00000267260 CACNA2D4Q7Z3S7 1137 aa14.04□□□□□ -0.16
SRRM4-201ENST00000267260 ALS2CR12Q96Q35 445 aa14.04□□□□□ -0.16
SRRM4-201ENST00000267260 ANO10Q9NW15 660 aa14.04□□□□□ -0.16
SRRM4-201ENST00000267260 CECR2Q9BXF3 1484 aa14.04□□□□□ -0.16
SRRM4-201ENST00000267260 FSD2A1L4K1 749 aa14.04□□□□□ -0.16
SRRM4-201ENST00000267260 CCDC183Q5T5S1 534 aa14.04□□□□□ -0.16
SRRM4-201ENST00000267260 FBF1Q8TES7 1133 aa14.04□□□□□ -0.16
SRRM4-201ENST00000267260 KDM4AO75164 1064 aa14.04□□□□□ -0.16
SRRM4-201ENST00000267260 NSRP1Q9H0G5 558 aaKnown RBP14.04□□□□□ -0.16
SRRM4-201ENST00000267260 SEC63Q9UGP8 760 aaKnown RBP14.04□□□□□ -0.16
SRRM4-201ENST00000267260 GSDMDP57764 484 aa14.04□□□□□ -0.16
SRRM4-201ENST00000267260 HMOX1P09601 288 aa14.03□□□□□ -0.16
SRRM4-201ENST00000267260 LMAN1P49257 510 aa14.03□□□□□ -0.16
SRRM4-201ENST00000267260 RAI14Q9P0K7 980 aa14.03□□□□□ -0.16
SRRM4-201ENST00000267260 MSL1Q68DK7 614 aa14.03□□□□□ -0.16
SRRM4-201ENST00000267260 CEP83Q9Y592 693 aa14.03□□□□□ -0.16
SRRM4-201ENST00000267260 POLA1P09884 1462 aaPredicted RBP14.03□□□□□ -0.16
SRRM4-201ENST00000267260 LARP1Q6PKG0 1096 aaKnown RBP14.03□□□□□ -0.16
SRRM4-201ENST00000267260 CCDC6Q16204 474 aa14.03□□□□□ -0.16
SRRM4-201ENST00000267260 KIF4BQ2VIQ3 1234 aa14.03□□□□□ -0.16
SRRM4-201ENST00000267260 ZHX1Q9UKY1 873 aaPredicted RBP14.03□□□□□ -0.16
SRRM4-201ENST00000267260 TSNARE1Q96NA8 513 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms