RNA–Protein interactions for RNA: ENST00000264951.8

XRN1-201, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene XRN1, Length 10,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-201ENST00000264951 EIF5P55010 431 aaKnown RBP6.36□□□□□ -1.39
XRN1-201ENST00000264951 FKBP5Q13451 457 aaPredicted RBP6.36□□□□□ -1.39
XRN1-201ENST00000264951 CCDC77Q9BR77 488 aa6.36□□□□□ -1.39
XRN1-201ENST00000264951 ZNF287Q9HBT7 754 aa6.36□□□□□ -1.39
XRN1-201ENST00000264951 MKRN1Q9UHC7 482 aaKnown RBP6.36□□□□□ -1.39
XRN1-201ENST00000264951 GTF2A1P52655 376 aaPredicted RBP6.36□□□□□ -1.39
XRN1-201ENST00000264951 EXOC6Q8TAG9 804 aa6.36□□□□□ -1.39
XRN1-201ENST00000264951 CCDC171Q6TFL3 1326 aa6.36□□□□□ -1.39
XRN1-201ENST00000264951 GSTTP1A0A1W2PQM5 241 aa6.36□□□□□ -1.39
XRN1-201ENST00000264951 TSNARE1Q96NA8 513 aa6.36□□□□□ -1.39
XRN1-201ENST00000264951 SH2B1Q9NRF2 756 aaPredicted RBP6.36□□□□□ -1.39
XRN1-201ENST00000264951 CCDC196A0A1B0GTZ2 297 aa6.36□□□□□ -1.39
XRN1-201ENST00000264951 KIAA1524Q8TCG1 905 aa6.36□□□□□ -1.39
XRN1-201ENST00000264951 USP47Q96K76 1375 aa6.35□□□□□ -1.39
XRN1-201ENST00000264951 OPA1O60313 960 aa6.35□□□□□ -1.39
XRN1-201ENST00000264951 CCDC150Q8NCX0 1101 aa6.35□□□□□ -1.39
XRN1-201ENST00000264951 SMC6Q96SB8 1091 aa6.35□□□□□ -1.39
XRN1-201ENST00000264951 SPATA32Q96LK8 384 aa6.35□□□□□ -1.39
XRN1-201ENST00000264951 FSD1Q9BTV5 496 aa6.35□□□□□ -1.39
XRN1-201ENST00000264951 LUC7L2Q9Y383 392 aaKnown RBP6.35□□□□□ -1.39
XRN1-201ENST00000264951 YEATS4O95619 227 aa6.35□□□□□ -1.39
XRN1-201ENST00000264951 ARID4AP29374 1257 aaPredicted RBP6.35□□□□□ -1.39
XRN1-201ENST00000264951 MAP3K9P80192 1104 aa6.35□□□□□ -1.39
XRN1-201ENST00000264951 ZBTB17Q13105 803 aa6.35□□□□□ -1.39
XRN1-201ENST00000264951 FOXD4L6Q3SYB3 417 aaPredicted RBP6.35□□□□□ -1.39
XRN1-201ENST00000264951 FOXD4L3Q6VB84 417 aaPredicted RBP6.35□□□□□ -1.39
XRN1-201ENST00000264951 RNF168Q8IYW5 571 aaPredicted RBP6.35□□□□□ -1.39
XRN1-201ENST00000264951 CCDC155Q8N6L0 562 aa6.35□□□□□ -1.39
XRN1-201ENST00000264951 ANAPC4Q9UJX5 808 aa6.35□□□□□ -1.39
XRN1-201ENST00000264951 SPECC1Q5M775 1068 aa6.35□□□□□ -1.39
XRN1-201ENST00000264951 CROCCP2Q86T23 111 aa6.35□□□□□ -1.39
XRN1-201ENST00000264951 FIBPO43427 364 aa6.35□□□□□ -1.39
XRN1-201ENST00000264951 KIF5BP33176 963 aa6.35□□□□□ -1.39
XRN1-201ENST00000264951 MIPOL1Q8TD10 442 aa6.35□□□□□ -1.39
XRN1-201ENST00000264951 CCDC158Q5M9N0 1113 aa6.35□□□□□ -1.39
XRN1-201ENST00000264951 CCDC183Q5T5S1 534 aa6.35□□□□□ -1.39
XRN1-201ENST00000264951 MCM4P33991 863 aa6.35□□□□□ -1.39
XRN1-201ENST00000264951 CASQ1P31415 396 aa6.34□□□□□ -1.39
XRN1-201ENST00000264951 SOGA3Q5TF21 947 aa6.34□□□□□ -1.39
XRN1-201ENST00000264951 IKBKGQ9Y6K9 419 aa6.34□□□□□ -1.39
XRN1-201ENST00000264951 CASTP20810 708 aaKnown RBP6.34□□□□□ -1.39
XRN1-201ENST00000264951 CCT4P50991 539 aaKnown RBP6.34□□□□□ -1.39
XRN1-201ENST00000264951 NAP1L3Q99457 506 aaPredicted RBP6.34□□□□□ -1.39
XRN1-201ENST00000264951 TSG101Q99816 390 aa6.34□□□□□ -1.39
XRN1-201ENST00000264951 SOX12O15370 315 aa6.34□□□□□ -1.39
XRN1-201ENST00000264951 KANK3Q6NY19 840 aa6.34□□□□□ -1.39
XRN1-201ENST00000264951 L3MBTL2Q969R5 705 aa6.34□□□□□ -1.39
XRN1-201ENST00000264951 LRRC27Q9C0I9 530 aa6.34□□□□□ -1.39
XRN1-201ENST00000264951 DDX19AQ9NUU7 478 aaKnown RBP6.34□□□□□ -1.39
XRN1-201ENST00000264951 CLIP2Q9UDT6 1046 aa6.34□□□□□ -1.39
XRN1-201ENST00000264951 FBXO3Q9UK99 471 aa6.34□□□□□ -1.39
XRN1-201ENST00000264951 ALDH3A1P30838 453 aa6.34□□□□□ -1.39
XRN1-201ENST00000264951 ARFGAP3Q9NP61 516 aa6.34□□□□□ -1.39
XRN1-201ENST00000264951 POLA1P09884 1462 aaPredicted RBP6.34□□□□□ -1.39
XRN1-201ENST00000264951 ZWINTO95229 277 aa6.34□□□□□ -1.39
XRN1-201ENST00000264951 TMEM132AQ24JP5 1023 aa6.34□□□□□ -1.39
XRN1-201ENST00000264951 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.34□□□□□ -1.39
XRN1-201ENST00000264951 ACTN2P35609 894 aa6.34□□□□□ -1.4
XRN1-201ENST00000264951 CFAP100Q494V2 611 aa6.34□□□□□ -1.4
XRN1-201ENST00000264951 IFT74Q96LB3 600 aa6.34□□□□□ -1.4
XRN1-201ENST00000264951 EBAG9O00559 213 aa6.34□□□□□ -1.4
XRN1-201ENST00000264951 ATP2A1O14983 1001 aa6.34□□□□□ -1.4
XRN1-201ENST00000264951 WASHC4Q2M389 1173 aa6.34□□□□□ -1.4
XRN1-201ENST00000264951 LARP1BQ659C4 914 aaKnown RBP6.34□□□□□ -1.4
XRN1-201ENST00000264951 STMN1P16949 149 aa6.33□□□□□ -1.4
XRN1-201ENST00000264951 KIF4BQ2VIQ3 1234 aa6.33□□□□□ -1.4
XRN1-201ENST00000264951 CCDC30Q5VVM6 783 aa6.33□□□□□ -1.4
XRN1-201ENST00000264951 MSL1Q68DK7 614 aa6.33□□□□□ -1.4
XRN1-201ENST00000264951 PPFIBP2Q8ND30 876 aa6.33□□□□□ -1.4
XRN1-201ENST00000264951 JAKMIP2Q96AA8 810 aa6.33□□□□□ -1.4
XRN1-201ENST00000264951 TANGO6Q9C0B7 1094 aa6.33□□□□□ -1.4
XRN1-201ENST00000264951 USP25Q9UHP3 1055 aa6.33□□□□□ -1.4
XRN1-201ENST00000264951 TTC21AQ8NDW8 1320 aa6.33□□□□□ -1.4
XRN1-201ENST00000264951 PABPN1LA6NDY0 278 aaKnown RBP6.33□□□□□ -1.4
XRN1-201ENST00000264951 TNIP1Q15025 636 aa6.33□□□□□ -1.4
XRN1-201ENST00000264951 RNF187Q5TA31 235 aaPredicted RBP6.33□□□□□ -1.4
XRN1-201ENST00000264951 PNISRQ8TF01 805 aaKnown RBP6.33□□□□□ -1.4
XRN1-201ENST00000264951 BCCIPQ9P287 314 aaKnown RBP eCLIP6.33□□□□□ -1.4
XRN1-201ENST00000264951 RASAL2Q9UJF2 1139 aa6.33□□□□□ -1.4
XRN1-201ENST00000264951 WIZO95785 1651 aa6.33□□□□□ -1.4
XRN1-201ENST00000264951 ERICH4A6NGS2 130 aa6.33□□□□□ -1.4
XRN1-201ENST00000264951 TDO2P48775 406 aa6.33□□□□□ -1.4
XRN1-201ENST00000264951 FAM193AP78312 1265 aa6.33□□□□□ -1.4
XRN1-201ENST00000264951 STXBP4Q6ZWJ1 553 aa6.33□□□□□ -1.4
XRN1-201ENST00000264951 BRPF1P55201 1214 aaPredicted RBP6.33□□□□□ -1.4
XRN1-201ENST00000264951 SPAG1Q07617 926 aa6.33□□□□□ -1.4
XRN1-201ENST00000264951 USP37Q86T82 979 aa6.33□□□□□ -1.4
XRN1-201ENST00000264951 HOMER2Q9NSB8 354 aa6.33□□□□□ -1.4
XRN1-201ENST00000264951 PLEKHH2Q8IVE3 1493 aa6.33□□□□□ -1.4
XRN1-201ENST00000264951 CLGNO14967 610 aa6.33□□□□□ -1.4
XRN1-201ENST00000264951 TOP1P11387 765 aaKnown RBP6.33□□□□□ -1.4
XRN1-201ENST00000264951 TUBB2AQ13885 445 aa6.33□□□□□ -1.4
XRN1-201ENST00000264951 TICAM2Q86XR7 235 aa6.33□□□□□ -1.4
XRN1-201ENST00000264951 TUBB2BQ9BVA1 445 aa6.33□□□□□ -1.4
XRN1-201ENST00000264951 CTCFLQ8NI51 663 aaPredicted RBP6.33□□□□□ -1.4
XRN1-201ENST00000264951 LIG1P18858 919 aa6.32□□□□□ -1.4
XRN1-201ENST00000264951 B4GALNT4Q76KP1 1039 aa6.32□□□□□ -1.4
XRN1-201ENST00000264951 GAS2L2Q8NHY3 880 aa6.32□□□□□ -1.4
XRN1-201ENST00000264951 SENP3-EIF4A1A0A087X0R7 540 aa6.32□□□□□ -1.4
XRN1-201ENST00000264951 RAB3IL1Q8TBN0 382 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms