RNA–Protein interactions for RNA: ENST00000262215.7

ARFGEF1-201, Transcript of ADP ribosylation factor guanine nucleotide exchange factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ARFGEF1, Length 7,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1-201ENST00000262215 ZHX1Q9UKY1 873 aaPredicted RBP14.6□□□□□ -0.07
ARFGEF1-201ENST00000262215 SHTN1A0MZ66 631 aa14.6□□□□□ -0.07
ARFGEF1-201ENST00000262215 TMCO5BA8MYB1 307 aa14.6□□□□□ -0.07
ARFGEF1-201ENST00000262215 NUP62CLQ9H1M0 184 aa14.6□□□□□ -0.07
ARFGEF1-201ENST00000262215 MTHFSP49914 203 aa14.6□□□□□ -0.07
ARFGEF1-201ENST00000262215 SYCE3A1L190 88 aa14.6□□□□□ -0.07
ARFGEF1-201ENST00000262215 ATP2C2O75185 946 aa14.59□□□□□ -0.07
ARFGEF1-201ENST00000262215 MPHOSPH8Q99549 860 aa14.59□□□□□ -0.07
ARFGEF1-201ENST00000262215 IL1RAPL2Q9NP60 686 aa14.59□□□□□ -0.07
ARFGEF1-201ENST00000262215 HIP1O00291 1037 aa14.59□□□□□ -0.07
ARFGEF1-201ENST00000262215 UBAC1Q9BSL1 405 aa14.59□□□□□ -0.07
ARFGEF1-201ENST00000262215 URI1O94763 535 aaPredicted RBP14.59□□□□□ -0.07
ARFGEF1-201ENST00000262215 STAMBPO95630 424 aa14.59□□□□□ -0.07
ARFGEF1-201ENST00000262215 AACSQ86V21 672 aa14.59□□□□□ -0.07
ARFGEF1-201ENST00000262215 DRC1Q96MC2 740 aa14.59□□□□□ -0.07
ARFGEF1-201ENST00000262215 PDRG1Q9NUG6 133 aa14.59□□□□□ -0.07
ARFGEF1-201ENST00000262215 TRMT1Q9NXH9 659 aaKnown RBP14.59□□□□□ -0.07
ARFGEF1-201ENST00000262215 SPDYE4A6NLX3 237 aa14.59□□□□□ -0.07
ARFGEF1-201ENST00000262215 CCDC57Q2TAC2 916 aa14.59□□□□□ -0.07
ARFGEF1-201ENST00000262215 WDR78Q5VTH9 848 aa14.59□□□□□ -0.07
ARFGEF1-201ENST00000262215 TWISTNBQ3B726 338 aaPredicted RBP14.59□□□□□ -0.07
ARFGEF1-201ENST00000262215 GUCY1B3Q02153 619 aa14.58□□□□□ -0.07
ARFGEF1-201ENST00000262215 TXLNBQ8N3L3 684 aa14.58□□□□□ -0.08
ARFGEF1-201ENST00000262215 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.58□□□□□ -0.08
ARFGEF1-201ENST00000262215 PRKAR2BP31323 418 aa14.58□□□□□ -0.08
ARFGEF1-201ENST00000262215 LUZP1Q86V48 1076 aa14.58□□□□□ -0.08
ARFGEF1-201ENST00000262215 WDR33Q9C0J8 1336 aaKnown RBP14.58□□□□□ -0.08
ARFGEF1-201ENST00000262215 FAM107BQ9H098 131 aa14.58□□□□□ -0.08
ARFGEF1-201ENST00000262215 ESCO1Q5FWF5 840 aa14.58□□□□□ -0.08
ARFGEF1-201ENST00000262215 TDRD9Q8NDG6 1382 aaKnown RBP14.58□□□□□ -0.08
ARFGEF1-201ENST00000262215 K7ELQ4 463 aaPredicted RBP14.57□□□□□ -0.08
ARFGEF1-201ENST00000262215 TCP11L2Q8N4U5 519 aa14.57□□□□□ -0.08
ARFGEF1-201ENST00000262215 BACH2Q9BYV9 841 aa14.57□□□□□ -0.08
ARFGEF1-201ENST00000262215 SPTY2D1Q68D10 685 aaPredicted RBP14.57□□□□□ -0.08
ARFGEF1-201ENST00000262215 IDH1O75874 414 aaKnown RBP14.57□□□□□ -0.08
ARFGEF1-201ENST00000262215 CASQ1P31415 396 aa14.57□□□□□ -0.08
ARFGEF1-201ENST00000262215 MCM2P49736 904 aa14.57□□□□□ -0.08
ARFGEF1-201ENST00000262215 CCDC96Q2M329 555 aa14.57□□□□□ -0.08
ARFGEF1-201ENST00000262215 SPA17Q15506 151 aa14.57□□□□□ -0.08
ARFGEF1-201ENST00000262215 BLOC1S2Q6QNY1 142 aa14.56□□□□□ -0.08
ARFGEF1-201ENST00000262215 ZNF397Q8NF99 534 aaPredicted RBP14.56□□□□□ -0.08
ARFGEF1-201ENST00000262215 ABCF2Q9UG63 623 aa14.56□□□□□ -0.08
ARFGEF1-201ENST00000262215 KIF4BQ2VIQ3 1234 aa14.56□□□□□ -0.08
ARFGEF1-201ENST00000262215 PLCD3Q8N3E9 789 aa14.56□□□□□ -0.08
ARFGEF1-201ENST00000262215 SPECC1Q5M775 1068 aa14.56□□□□□ -0.08
ARFGEF1-201ENST00000262215 HDGFL1Q5TGJ6 251 aa14.56□□□□□ -0.08
ARFGEF1-201ENST00000262215 CACNA2D4Q7Z3S7 1137 aa14.56□□□□□ -0.08
ARFGEF1-201ENST00000262215 LRP2BPQ9P2M1 347 aa14.56□□□□□ -0.08
ARFGEF1-201ENST00000262215 CGNQ9P2M7 1197 aaKnown RBP14.56□□□□□ -0.08
ARFGEF1-201ENST00000262215 LARP1Q6PKG0 1096 aaKnown RBP14.56□□□□□ -0.08
ARFGEF1-201ENST00000262215 GTF2F1P35269 517 aaKnown RBP eCLIP14.55□□□□□ -0.086e-6■□□□□ 9.8
ARFGEF1-201ENST00000262215 PRPF4BQ13523 1007 aaKnown RBP14.55□□□□□ -0.08
ARFGEF1-201ENST00000262215 DDX23Q9BUQ8 820 aaKnown RBP14.55□□□□□ -0.08
ARFGEF1-201ENST00000262215 POTEJP0CG39 1038 aa14.55□□□□□ -0.08
ARFGEF1-201ENST00000262215 CABP4P57796 275 aa14.55□□□□□ -0.08
ARFGEF1-201ENST00000262215 LARP6Q9BRS8 491 aaKnown RBP14.55□□□□□ -0.08
ARFGEF1-201ENST00000262215 AKNAQ7Z591 1439 aa14.55□□□□□ -0.08
ARFGEF1-201ENST00000262215 ANKRD1Q15327 319 aa14.54□□□□□ -0.08
ARFGEF1-201ENST00000262215 CTNNA2P26232 953 aa14.54□□□□□ -0.08
ARFGEF1-201ENST00000262215 NUTM1Q86Y26 1132 aa14.54□□□□□ -0.08
ARFGEF1-201ENST00000262215 CYB5RLQ6IPT4 315 aa14.54□□□□□ -0.08
ARFGEF1-201ENST00000262215 MINDY4BA8MYZ0 360 aa14.54□□□□□ -0.08
ARFGEF1-201ENST00000262215 CASTP20810 708 aaKnown RBP14.54□□□□□ -0.08
ARFGEF1-201ENST00000262215 HLTFQ14527 1009 aaKnown RBP eCLIP14.54□□□□□ -0.08
ARFGEF1-201ENST00000262215 PTPN14Q15678 1187 aa14.54□□□□□ -0.08
ARFGEF1-201ENST00000262215 APBB1IPQ7Z5R6 666 aaPredicted RBP14.54□□□□□ -0.08
ARFGEF1-201ENST00000262215 TERF1P54274 439 aa14.53□□□□□ -0.08
ARFGEF1-201ENST00000262215 GRIPAP1Q4V328 841 aa14.53□□□□□ -0.08
ARFGEF1-201ENST00000262215 HOOK3Q86VS8 718 aa14.53□□□□□ -0.08
ARFGEF1-201ENST00000262215 CETN2P41208 172 aa14.53□□□□□ -0.08
ARFGEF1-201ENST00000262215 TDRD12Q587J7 1177 aaKnown RBP14.53□□□□□ -0.08
ARFGEF1-201ENST00000262215 PPFIA3O75145 1194 aa14.53□□□□□ -0.08
ARFGEF1-201ENST00000262215 ZSWIM4Q9H7M6 989 aa14.53□□□□□ -0.08
ARFGEF1-201ENST00000262215 ISM2Q6H9L7 571 aa14.53□□□□□ -0.08
ARFGEF1-201ENST00000262215 CCDC83Q8IWF9 413 aa14.53□□□□□ -0.08
ARFGEF1-201ENST00000262215 SMTNL1A8MU46 457 aa14.52□□□□□ -0.08
ARFGEF1-201ENST00000262215 XPCQ01831 940 aaPredicted RBP14.52□□□□□ -0.08
ARFGEF1-201ENST00000262215 FHOD3Q2V2M9 1422 aa14.52□□□□□ -0.08
ARFGEF1-201ENST00000262215 SLC4A8Q2Y0W8 1093 aa14.52□□□□□ -0.08
ARFGEF1-201ENST00000262215 SKAP1Q86WV1 359 aa14.52□□□□□ -0.08
ARFGEF1-201ENST00000262215 PAXIP1Q6ZW49 1069 aaPredicted RBP14.52□□□□□ -0.09
ARFGEF1-201ENST00000262215 TMEM87AQ8NBN3 555 aa14.52□□□□□ -0.09
ARFGEF1-201ENST00000262215 SF3B2Q13435 895 aaKnown RBP14.52□□□□□ -0.09
ARFGEF1-201ENST00000262215 PLEKHO1Q53GL0 409 aaPredicted RBP14.52□□□□□ -0.09
ARFGEF1-201ENST00000262215 HOMER2Q9NSB8 354 aa14.51□□□□□ -0.09
ARFGEF1-201ENST00000262215 SRGAP3O43295 1099 aa14.51□□□□□ -0.09
ARFGEF1-201ENST00000262215 PPM1EQ8WY54 764 aa14.51□□□□□ -0.09
ARFGEF1-201ENST00000262215 UACAQ9BZF9 1416 aa14.51□□□□□ -0.09
ARFGEF1-201ENST00000262215 KIF5CO60282 957 aa14.51□□□□□ -0.09
ARFGEF1-201ENST00000262215 NUP88Q99567 741 aaPredicted RBP14.51□□□□□ -0.09
ARFGEF1-201ENST00000262215 ZNF219Q9P2Y4 722 aaPredicted RBP14.51□□□□□ -0.09
ARFGEF1-201ENST00000262215 ARL1P40616 181 aaPredicted RBP14.51□□□□□ -0.09
ARFGEF1-201ENST00000262215 MAP3K11Q16584 847 aa14.51□□□□□ -0.09
ARFGEF1-201ENST00000262215 MMRN2Q9H8L6 949 aa14.51□□□□□ -0.09
ARFGEF1-201ENST00000262215 TOM1L2Q6ZVM7 507 aa14.5□□□□□ -0.09
ARFGEF1-201ENST00000262215 PPP1R12BO60237 982 aaPredicted RBP14.5□□□□□ -0.09
ARFGEF1-201ENST00000262215 SFPQP23246 707 aaKnown RBP eCLIP14.5□□□□□ -0.09
ARFGEF1-201ENST00000262215 SULT6B1Q6IMI4 303 aa14.5□□□□□ -0.09
ARFGEF1-201ENST00000262215 PUF60Q9UHX1 559 aaKnown RBP14.5□□□□□ -0.09
ARFGEF1-201ENST00000262215 CA8P35219 290 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms