RNA–Protein interactions for RNA: ENST00000258349.8

RC3H1-201, Transcript of ring finger and CCCH-type domains 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RC3H1, Length 10,988 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-201ENST00000258349 TMEM132AQ24JP5 1023 aa5.64□□□□□ -1.51
RC3H1-201ENST00000258349 LARP1BQ659C4 914 aaKnown RBP5.64□□□□□ -1.51
RC3H1-201ENST00000258349 ZSCAN12O43309 604 aa5.63□□□□□ -1.51
RC3H1-201ENST00000258349 IMMTQ16891 758 aaKnown RBP5.63□□□□□ -1.51
RC3H1-201ENST00000258349 ZNF428Q96B54 188 aa5.63□□□□□ -1.51
RC3H1-201ENST00000258349 DNAJC2Q99543 621 aaKnown RBP5.63□□□□□ -1.51
RC3H1-201ENST00000258349 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP5.63□□□□□ -1.51
RC3H1-201ENST00000258349 SHTN1A0MZ66 631 aa5.63□□□□□ -1.51
RC3H1-201ENST00000258349 SURF6O75683 361 aaKnown RBP5.63□□□□□ -1.51
RC3H1-201ENST00000258349 CEBPZQ03701 1054 aaKnown RBP5.63□□□□□ -1.51
RC3H1-201ENST00000258349 PLCD4Q9BRC7 762 aa5.63□□□□□ -1.51
RC3H1-201ENST00000258349 UPF3BQ9BZI7 483 aaKnown RBP5.63□□□□□ -1.51
RC3H1-201ENST00000258349 TRIM21P19474 475 aaKnown RBP5.63□□□□□ -1.51
RC3H1-201ENST00000258349 MCM5P33992 734 aa5.63□□□□□ -1.51
RC3H1-201ENST00000258349 IKQ13123 557 aaPredicted RBP5.63□□□□□ -1.51
RC3H1-201ENST00000258349 KIF18AQ8NI77 898 aa5.63□□□□□ -1.51
RC3H1-201ENST00000258349 CALCOCO1Q9P1Z2 691 aa5.63□□□□□ -1.51
RC3H1-201ENST00000258349 CTNNA3Q9UI47 895 aa5.63□□□□□ -1.51
RC3H1-201ENST00000258349 MCM4P33991 863 aa5.63□□□□□ -1.51
RC3H1-201ENST00000258349 MTHFSP49914 203 aa5.63□□□□□ -1.51
RC3H1-201ENST00000258349 PDRG1Q9NUG6 133 aa5.63□□□□□ -1.51
RC3H1-201ENST00000258349 DHX29Q7Z478 1369 aaKnown RBP5.63□□□□□ -1.51
RC3H1-201ENST00000258349 MYH6P13533 1939 aa5.63□□□□□ -1.51
RC3H1-201ENST00000258349 ATF3P18847 181 aa5.63□□□□□ -1.51
RC3H1-201ENST00000258349 FAM193AP78312 1265 aa5.63□□□□□ -1.51
RC3H1-201ENST00000258349 SKIDA1Q1XH10 827 aa5.63□□□□□ -1.51
RC3H1-201ENST00000258349 TCP11L2Q8N4U5 519 aa5.63□□□□□ -1.51
RC3H1-201ENST00000258349 AIMP1Q12904 312 aaKnown RBP5.63□□□□□ -1.51
RC3H1-201ENST00000258349 TWISTNBQ3B726 338 aaPredicted RBP5.63□□□□□ -1.51
RC3H1-201ENST00000258349 PLEKHO1Q53GL0 409 aaPredicted RBP5.63□□□□□ -1.51
RC3H1-201ENST00000258349 MICALCLQ6ZW33 695 aa5.63□□□□□ -1.51
RC3H1-201ENST00000258349 CABP2Q9NPB3 220 aa5.63□□□□□ -1.51
RC3H1-201ENST00000258349 NEMFO60524 1076 aa5.62□□□□□ -1.51
RC3H1-201ENST00000258349 CCDC57Q2TAC2 916 aa5.62□□□□□ -1.51
RC3H1-201ENST00000258349 GIMAP7Q8NHV1 300 aa5.62□□□□□ -1.51
RC3H1-201ENST00000258349 CTAGE5O15320 804 aa5.62□□□□□ -1.51
RC3H1-201ENST00000258349 MEX3CQ5U5Q3 659 aaKnown RBP5.62□□□□□ -1.51
RC3H1-201ENST00000258349 ATF7IPQ6VMQ6 1270 aa5.62□□□□□ -1.51
RC3H1-201ENST00000258349 PNISRQ8TF01 805 aaKnown RBP5.62□□□□□ -1.51
RC3H1-201ENST00000258349 CCDC102AQ96A19 550 aa5.62□□□□□ -1.51
RC3H1-201ENST00000258349 CRACR2AQ9BSW2 395 aa5.62□□□□□ -1.51
RC3H1-201ENST00000258349 DNAI2Q9GZS0 605 aa5.62□□□□□ -1.51
RC3H1-201ENST00000258349 KIF5CO60282 957 aa5.62□□□□□ -1.51
RC3H1-201ENST00000258349 FGFR1OPO95684 399 aaKnown RBP5.62□□□□□ -1.51
RC3H1-201ENST00000258349 CASTP20810 708 aaKnown RBP5.62□□□□□ -1.51
RC3H1-201ENST00000258349 PHAXQ9H814 394 aaKnown RBP5.62□□□□□ -1.51
RC3H1-201ENST00000258349 SH2B1Q9NRF2 756 aaPredicted RBP5.62□□□□□ -1.51
RC3H1-201ENST00000258349 GOLGA6L10A0A0M3HER8 536 aa5.62□□□□□ -1.51
RC3H1-201ENST00000258349 SFPQP23246 707 aaKnown RBP eCLIP5.62□□□□□ -1.51
RC3H1-201ENST00000258349 IL27Q8NEV9 243 aa5.62□□□□□ -1.51
RC3H1-201ENST00000258349 LRRFIP2Q9Y608 721 aaKnown RBP5.62□□□□□ -1.51
RC3H1-201ENST00000258349 ASXL1Q8IXJ9 1541 aa5.62□□□□□ -1.51
RC3H1-201ENST00000258349 IFT140Q96RY7 1462 aa5.62□□□□□ -1.51
RC3H1-201ENST00000258349 ERICH4A6NGS2 130 aa5.62□□□□□ -1.51
RC3H1-201ENST00000258349 PPP1R12BO60237 982 aaPredicted RBP5.62□□□□□ -1.51
RC3H1-201ENST00000258349 ARHGAP29Q52LW3 1261 aa5.62□□□□□ -1.51
RC3H1-201ENST00000258349 CDK13Q14004 1512 aaKnown RBP5.62□□□□□ -1.51
RC3H1-201ENST00000258349 TSPOAP1O95153 1857 aa5.62□□□□□ -1.51
RC3H1-201ENST00000258349 TOPBP1Q92547 1522 aa5.62□□□□□ -1.51
RC3H1-201ENST00000258349 MYH9P35579 1960 aaKnown RBP5.62□□□□□ -1.51
RC3H1-201ENST00000258349 SYCE3A1L190 88 aa5.62□□□□□ -1.51
RC3H1-201ENST00000258349 TMCO3Q6UWJ1 677 aa5.62□□□□□ -1.51
RC3H1-201ENST00000258349 TAF4BQ92750 862 aa5.62□□□□□ -1.51
RC3H1-201ENST00000258349 C1orf115Q9H7X2 142 aa5.62□□□□□ -1.51
RC3H1-201ENST00000258349 ABCC11Q96J66 1382 aa5.62□□□□□ -1.51
RC3H1-201ENST00000258349 RAB11FIP3O75154 756 aa5.61□□□□□ -1.51
RC3H1-201ENST00000258349 POTEJP0CG39 1038 aa5.61□□□□□ -1.51
RC3H1-201ENST00000258349 UBXN4Q92575 508 aa5.61□□□□□ -1.51
RC3H1-201ENST00000258349 RALGAPBQ86X10 1494 aa5.61□□□□□ -1.51
RC3H1-201ENST00000258349 IGF1RP08069 1367 aa5.61□□□□□ -1.51
RC3H1-201ENST00000258349 BLOC1S2Q6QNY1 142 aa5.61□□□□□ -1.51
RC3H1-201ENST00000258349 CCDC83Q8IWF9 413 aa5.61□□□□□ -1.51
RC3H1-201ENST00000258349 ANKRD30BQ9BXX2 1392 aa5.61□□□□□ -1.51
RC3H1-201ENST00000258349 PTPN14Q15678 1187 aa5.61□□□□□ -1.51
RC3H1-201ENST00000258349 BMP2KQ9NSY1 1161 aaPredicted RBP5.61□□□□□ -1.51
RC3H1-201ENST00000258349 MSH5O43196 834 aa5.61□□□□□ -1.51
RC3H1-201ENST00000258349 CAVIN2O95810 425 aa5.61□□□□□ -1.51
RC3H1-201ENST00000258349 NSD3Q9BZ95 1437 aa5.61□□□□□ -1.51
RC3H1-201ENST00000258349 LUZP1Q86V48 1076 aa5.61□□□□□ -1.51
RC3H1-201ENST00000258349 U3KPZ7 1027 aaPredicted RBP5.61□□□□□ -1.51
RC3H1-201ENST00000258349 ATAD2Q6PL18 1390 aa5.61□□□□□ -1.51
RC3H1-201ENST00000258349 SPA17Q15506 151 aa5.61□□□□□ -1.51
RC3H1-201ENST00000258349 VPS36Q86VN1 386 aa5.61□□□□□ -1.51
RC3H1-201ENST00000258349 CNNM1Q9NRU3 951 aa5.61□□□□□ -1.51
RC3H1-201ENST00000258349 PRKAR2BP31323 418 aa5.61□□□□□ -1.51
RC3H1-201ENST00000258349 TANGO6Q9C0B7 1094 aa5.61□□□□□ -1.51
RC3H1-201ENST00000258349 GSDMDP57764 484 aa5.61□□□□□ -1.51
RC3H1-201ENST00000258349 DYNC1I1O14576 645 aa5.61□□□□□ -1.51
RC3H1-201ENST00000258349 AACSQ86V21 672 aa5.61□□□□□ -1.51
RC3H1-201ENST00000258349 TAX1BP1Q86VP1 789 aa5.61□□□□□ -1.51
RC3H1-201ENST00000258349 TROQ12816 1431 aaPredicted RBP5.6□□□□□ -1.51
RC3H1-201ENST00000258349 POLR3GO15318 223 aaPredicted RBP5.6□□□□□ -1.51
RC3H1-201ENST00000258349 STX1AQ16623 288 aa5.6□□□□□ -1.51
RC3H1-201ENST00000258349 SHROOM2Q13796 1616 aa5.6□□□□□ -1.51
RC3H1-201ENST00000258349 CFAP74Q9C0B2 1584 aa5.6□□□□□ -1.51
RC3H1-201ENST00000258349 ANKRD62A6NC57 917 aa5.6□□□□□ -1.51
RC3H1-201ENST00000258349 GOLGA6L9A6NEM1 432 aa5.6□□□□□ -1.51
RC3H1-201ENST00000258349 FILIP1Q7Z7B0 1213 aa5.6□□□□□ -1.51
RC3H1-201ENST00000258349 SCAND2PQ9GZW5 306 aaPredicted RBP5.6□□□□□ -1.51
RC3H1-201ENST00000258349 STK3Q13188 491 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms