RNA–Protein interactions for RNA: ENST00000231021.8

CDH9-201, Transcript of cadherin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH9, Length 3,079 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9-201ENST00000231021 C1QTNF12Q5T7M4 302 aa5.36□□□□□ -1.55
CDH9-201ENST00000231021 ZNF746Q6NUN9 644 aaPredicted RBP5.36□□□□□ -1.55
CDH9-201ENST00000231021 FAM212AQ96EL1 285 aa5.36□□□□□ -1.55
CDH9-201ENST00000231021 STAC3Q96MF2 364 aa5.36□□□□□ -1.55
CDH9-201ENST00000231021 INO80BQ9C086 356 aaPredicted RBP5.36□□□□□ -1.55
CDH9-201ENST00000231021 H3BRB1 525 aa5.35□□□□□ -1.55
CDH9-201ENST00000231021 ATG7O95352 703 aa5.35□□□□□ -1.55
CDH9-201ENST00000231021 IBSPP21815 317 aaPredicted RBP5.35□□□□□ -1.55
CDH9-201ENST00000231021 JAMLQ86YT9 394 aa5.35□□□□□ -1.55
CDH9-201ENST00000231021 TUT1Q9H6E5 874 aaKnown RBP5.35□□□□□ -1.55
CDH9-201ENST00000231021 MFSD10Q14728 455 aa5.35□□□□□ -1.55
CDH9-201ENST00000231021 CERKQ8TCT0 537 aa5.35□□□□□ -1.55
CDH9-201ENST00000231021 GJD4Q96KN9 370 aaPredicted RBP5.35□□□□□ -1.55
CDH9-201ENST00000231021 EXOC5O00471 708 aa5.34□□□□□ -1.55
CDH9-201ENST00000231021 RTL5Q5HYW3 569 aaPredicted RBP5.34□□□□□ -1.55
CDH9-201ENST00000231021 CC2D1AQ6P1N0 951 aaPredicted RBP5.34□□□□□ -1.55
CDH9-201ENST00000231021 PDILTQ8N807 584 aa5.34□□□□□ -1.55
CDH9-201ENST00000231021 TMEM87AQ8NBN3 555 aa5.34□□□□□ -1.55
CDH9-201ENST00000231021 PAGR1Q9BTK6 254 aa5.34□□□□□ -1.55
CDH9-201ENST00000231021 AS3MTQ9HBK9 375 aa5.34□□□□□ -1.55
CDH9-201ENST00000231021 IQSEC2Q5JU85 1478 aa5.34□□□□□ -1.55
CDH9-201ENST00000231021 SUGP1Q8IWZ8 645 aaKnown RBP5.34□□□□□ -1.55
CDH9-201ENST00000231021 MS4A4AQ96JQ5 239 aa5.34□□□□□ -1.55
CDH9-201ENST00000231021 TRIM34Q9BYJ4 488 aa5.34□□□□□ -1.55
CDH9-201ENST00000231021 EID1Q9Y6B2 187 aa5.34□□□□□ -1.55
CDH9-201ENST00000231021 HECW2Q9P2P5 1572 aa5.34□□□□□ -1.55
CDH9-201ENST00000231021 PRC1O43663 620 aa5.34□□□□□ -1.56
CDH9-201ENST00000231021 LDHCP07864 332 aa5.34□□□□□ -1.56
CDH9-201ENST00000231021 DALRD3Q5D0E6 543 aaKnown RBP5.34□□□□□ -1.56
CDH9-201ENST00000231021 NYAP1Q6ZVC0 841 aa5.34□□□□□ -1.56
CDH9-201ENST00000231021 MUC3BQ9H195 1237 aa5.34□□□□□ -1.56
CDH9-201ENST00000231021 CDHR5Q9HBB8 845 aa5.34□□□□□ -1.56
CDH9-201ENST00000231021 MAPK1P28482 360 aa5.33□□□□□ -1.56
CDH9-201ENST00000231021 SIM2Q14190 667 aaPredicted RBP5.33□□□□□ -1.56
CDH9-201ENST00000231021 MRPL58Q14197 206 aaKnown RBP5.33□□□□□ -1.56
CDH9-201ENST00000231021 LDHAL6BQ9BYZ2 381 aaPredicted RBP5.33□□□□□ -1.56
CDH9-201ENST00000231021 GJA3Q9Y6H8 435 aa5.33□□□□□ -1.56
CDH9-201ENST00000231021 GOLGA3Q08378 1498 aa5.33□□□□□ -1.56
CDH9-201ENST00000231021 ANP32CO43423 234 aa5.33□□□□□ -1.56
CDH9-201ENST00000231021 IGHDP01880 384 aa5.33□□□□□ -1.56
CDH9-201ENST00000231021 PDGFRBP09619 1106 aa5.33□□□□□ -1.56
CDH9-201ENST00000231021 OSBPP22059 807 aa5.33□□□□□ -1.56
CDH9-201ENST00000231021 FANCCQ00597 558 aa5.33□□□□□ -1.56
CDH9-201ENST00000231021 EVX2Q03828 476 aa5.33□□□□□ -1.56
CDH9-201ENST00000231021 KANK4Q5T7N3 995 aaPredicted RBP5.33□□□□□ -1.56
CDH9-201ENST00000231021 DDX46Q7L014 1031 aaKnown RBP5.33□□□□□ -1.56
CDH9-201ENST00000231021 TMUB1Q9BVT8 246 aa5.33□□□□□ -1.56
CDH9-201ENST00000231021 ISY1Q9ULR0 285 aaKnown RBP5.33□□□□□ -1.56
CDH9-201ENST00000231021 HDAC5Q9UQL6 1122 aa5.33□□□□□ -1.56
CDH9-201ENST00000231021 FRMD4BQ9Y2L6 1034 aa5.33□□□□□ -1.56
CDH9-201ENST00000231021 PCDHB15Q9Y5E8 787 aa5.33□□□□□ -1.56
CDH9-201ENST00000231021 GNALP38405 381 aa5.32□□□□□ -1.56
CDH9-201ENST00000231021 CDKN1CP49918 316 aaPredicted RBP5.32□□□□□ -1.56
CDH9-201ENST00000231021 OSBPL2Q9H1P3 480 aa5.32□□□□□ -1.56
CDH9-201ENST00000231021 PPP4R2Q9NY27 417 aa5.32□□□□□ -1.56
CDH9-201ENST00000231021 NOVA2Q9UNW9 492 aaKnown RBP5.32□□□□□ -1.56
CDH9-201ENST00000231021 WDR62O43379 1518 aa5.32□□□□□ -1.56
CDH9-201ENST00000231021 FAM69CQ0P6D2 419 aa5.32□□□□□ -1.56
CDH9-201ENST00000231021 C14orf80Q86SX3 495 aa5.32□□□□□ -1.56
CDH9-201ENST00000231021 ZNF513Q8N8E2 541 aaPredicted RBP5.32□□□□□ -1.56
CDH9-201ENST00000231021 SYMPKQ92797 1274 aaKnown RBP5.32□□□□□ -1.56
CDH9-201ENST00000231021 ZRANB1Q9UGI0 708 aa5.32□□□□□ -1.56
CDH9-201ENST00000231021 WASHC2AQ641Q2 1341 aa5.32□□□□□ -1.56
CDH9-201ENST00000231021 DHX57Q6P158 1386 aaKnown RBP5.32□□□□□ -1.56
CDH9-201ENST00000231021 P4HBP07237 508 aaKnown RBP5.32□□□□□ -1.56
CDH9-201ENST00000231021 PDIA6Q15084 440 aa5.32□□□□□ -1.56
CDH9-201ENST00000231021 ALG2Q9H553 416 aa5.32□□□□□ -1.56
CDH9-201ENST00000231021 CABP2Q9NPB3 220 aa5.32□□□□□ -1.56
CDH9-201ENST00000231021 HDAC9Q9UKV0 1011 aa5.32□□□□□ -1.56
CDH9-201ENST00000231021 BAZ1BQ9UIG0 1483 aaKnown RBP5.32□□□□□ -1.56
CDH9-201ENST00000231021 USP17L8P0C7I0 530 aa5.31□□□□□ -1.56
CDH9-201ENST00000231021 TGFB3P10600 412 aa5.31□□□□□ -1.56
CDH9-201ENST00000231021 RACK1P63244 317 aaKnown RBP5.31□□□□□ -1.56
CDH9-201ENST00000231021 ZBED6P86452 979 aa5.31□□□□□ -1.56
CDH9-201ENST00000231021 UBE4AQ14139 1066 aa5.31□□□□□ -1.56
CDH9-201ENST00000231021 LMBRD2Q68DH5 695 aaPredicted RBP5.31□□□□□ -1.56
CDH9-201ENST00000231021 ZNF622Q969S3 477 aaKnown RBP eCLIP5.31□□□□□ -1.56
CDH9-201ENST00000231021 WASHC2CQ9Y4E1 1318 aa5.31□□□□□ -1.56
CDH9-201ENST00000231021 CEP164Q9UPV0 1460 aa5.31□□□□□ -1.56
CDH9-201ENST00000231021 MAP3K7O43318 606 aa5.31□□□□□ -1.56
CDH9-201ENST00000231021 CD53P19397 219 aa5.31□□□□□ -1.56
CDH9-201ENST00000231021 C21orf62-AS1Q17RA5 79 aa5.31□□□□□ -1.56
CDH9-201ENST00000231021 SLC4A8Q2Y0W8 1093 aa5.31□□□□□ -1.56
CDH9-201ENST00000231021 ICE2Q659A1 982 aa5.31□□□□□ -1.56
CDH9-201ENST00000231021 CABLES1Q8TDN4 633 aa5.31□□□□□ -1.56
CDH9-201ENST00000231021 CUEDC1Q9NWM3 386 aaPredicted RBP5.31□□□□□ -1.56
CDH9-201ENST00000231021 LAMC3Q9Y6N6 1575 aa5.31□□□□□ -1.56
CDH9-201ENST00000231021 PRPF3O43395 683 aaKnown RBP5.3□□□□□ -1.56
CDH9-201ENST00000231021 NRDCO43847 1150 aa5.3□□□□□ -1.56
CDH9-201ENST00000231021 EIF3JO75822 258 aaKnown RBP5.3□□□□□ -1.56
CDH9-201ENST00000231021 TTC30AQ86WT1 665 aa5.3□□□□□ -1.56
CDH9-201ENST00000231021 MKNK1Q9BUB5 465 aa5.3□□□□□ -1.56
CDH9-201ENST00000231021 GPCPD1Q9NPB8 672 aa5.3□□□□□ -1.56
CDH9-201ENST00000231021 SCAMP3O14828 347 aaKnown RBP5.3□□□□□ -1.56
CDH9-201ENST00000231021 CLGNO14967 610 aa5.3□□□□□ -1.56
CDH9-201ENST00000231021 VAMP1P23763 118 aa5.3□□□□□ -1.56
CDH9-201ENST00000231021 TRAPPC10P48553 1259 aa5.3□□□□□ -1.56
CDH9-201ENST00000231021 FERMT3Q86UX7 667 aa5.3□□□□□ -1.56
CDH9-201ENST00000231021 MCF2L2Q86YR7 1114 aa5.3□□□□□ -1.56
CDH9-201ENST00000231021 VPS37AQ8NEZ2 397 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms