RNA–Protein interactions for RNA: ENST00000215838.7

TCN2-201, Transcript of transcobalamin 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TCN2, Length 2,535 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCN2-201ENST00000215838 MBD3O95983 291 aa13.74□□□□□ -0.21
TCN2-201ENST00000215838 EXOSC9Q06265 439 aaKnown RBP13.74□□□□□ -0.21
TCN2-201ENST00000215838 TERF2Q15554 542 aa13.74□□□□□ -0.21
TCN2-201ENST00000215838 TPRNQ4KMQ1 711 aa13.74□□□□□ -0.21
TCN2-201ENST00000215838 KCNF1Q9H3M0 494 aa13.74□□□□□ -0.21
TCN2-201ENST00000215838 IQGAP1P46940 1657 aa13.74□□□□□ -0.21
TCN2-201ENST00000215838 MYOM1P52179 1685 aa13.74□□□□□ -0.21
TCN2-201ENST00000215838 IQSEC2Q5JU85 1478 aa13.74□□□□□ -0.21
TCN2-201ENST00000215838 CLTCL1P53675 1640 aa13.74□□□□□ -0.21
TCN2-201ENST00000215838 TRIM6-TRIM34B2RNG4 842 aa13.73□□□□□ -0.21
TCN2-201ENST00000215838 CHAF1AQ13111 956 aaPredicted RBP13.73□□□□□ -0.21
TCN2-201ENST00000215838 TRIM34Q9BYJ4 488 aa13.73□□□□□ -0.21
TCN2-201ENST00000215838 C1orf115Q9H7X2 142 aa13.73□□□□□ -0.21
TCN2-201ENST00000215838 GDPD2Q9HCC8 539 aa13.73□□□□□ -0.21
TCN2-201ENST00000215838 GADD45BO75293 160 aaPredicted RBP13.73□□□□□ -0.21
TCN2-201ENST00000215838 PLCB2Q00722 1185 aa13.73□□□□□ -0.21
TCN2-201ENST00000215838 KIAA1524Q8TCG1 905 aa13.73□□□□□ -0.21
TCN2-201ENST00000215838 CWC22Q9HCG8 908 aaKnown RBP13.73□□□□□ -0.21
TCN2-201ENST00000215838 DDX41Q9UJV9 622 aaKnown RBP13.73□□□□□ -0.21
TCN2-201ENST00000215838 SLC20A2Q08357 652 aa13.72□□□□□ -0.21
TCN2-201ENST00000215838 CCDC66A2RUB6 948 aa13.72□□□□□ -0.21
TCN2-201ENST00000215838 CDC45O75419 566 aa13.72□□□□□ -0.21
TCN2-201ENST00000215838 IRX3P78415 501 aaPredicted RBP13.72□□□□□ -0.21
TCN2-201ENST00000215838 KIF1BO60333 1816 aa13.72□□□□□ -0.21
TCN2-201ENST00000215838 GSPT1P15170 499 aaKnown RBP13.71□□□□□ -0.21
TCN2-201ENST00000215838 POLR3AO14802 1390 aaPredicted RBP13.71□□□□□ -0.21
TCN2-201ENST00000215838 SMARCA5O60264 1052 aaPredicted RBP13.71□□□□□ -0.21
TCN2-201ENST00000215838 HCLS1P14317 486 aaPredicted RBP13.71□□□□□ -0.21
TCN2-201ENST00000215838 SCAF11Q99590 1463 aaKnown RBP13.71□□□□□ -0.22
TCN2-201ENST00000215838 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.7□□□□□ -0.22
TCN2-201ENST00000215838 SHPRHQ149N8 1683 aa13.7□□□□□ -0.22
TCN2-201ENST00000215838 PTPRMP28827 1452 aa13.7□□□□□ -0.22
TCN2-201ENST00000215838 TULP2O00295 520 aa13.7□□□□□ -0.22
TCN2-201ENST00000215838 ST7Q9NRC1 585 aa13.7□□□□□ -0.22
TCN2-201ENST00000215838 ZNF142P52746 1687 aaPredicted RBP13.7□□□□□ -0.22
TCN2-201ENST00000215838 AP5Z1O43299 807 aa13.69□□□□□ -0.22
TCN2-201ENST00000215838 SPC24Q8NBT2 197 aa13.69□□□□□ -0.22
TCN2-201ENST00000215838 USP26Q9BXU7 913 aa13.69□□□□□ -0.22
TCN2-201ENST00000215838 MORC2Q9Y6X9 1032 aaPredicted RBP13.69□□□□□ -0.22
TCN2-201ENST00000215838 MYO3AQ8NEV4 1616 aa13.69□□□□□ -0.22
TCN2-201ENST00000215838 KIF18AQ8NI77 898 aa13.69□□□□□ -0.22
TCN2-201ENST00000215838 ADGRB3O60242 1522 aa13.69□□□□□ -0.22
TCN2-201ENST00000215838 PPIP5K1Q6PFW1 1433 aa13.69□□□□□ -0.22
TCN2-201ENST00000215838 RGS22Q8NE09 1264 aa13.68□□□□□ -0.22
TCN2-201ENST00000215838 TNRQ92752 1358 aa13.68□□□□□ -0.22
TCN2-201ENST00000215838 SECISBP2LQ93073 1101 aaKnown RBP13.68□□□□□ -0.22
TCN2-201ENST00000215838 UVSSAQ2YD98 709 aa13.67□□□□□ -0.22
TCN2-201ENST00000215838 CCDC27Q2M243 656 aa13.67□□□□□ -0.22
TCN2-201ENST00000215838 SYAP1Q96A49 352 aaPredicted RBP13.67□□□□□ -0.22
TCN2-201ENST00000215838 CHMP4CQ96CF2 233 aa13.67□□□□□ -0.22
TCN2-201ENST00000215838 SLC52A1Q9NWF4 448 aa13.67□□□□□ -0.22
TCN2-201ENST00000215838 CFAP65Q6ZU64 1925 aaKnown RBP13.67□□□□□ -0.22
TCN2-201ENST00000215838 ST18O60284 1047 aa13.66□□□□□ -0.22
TCN2-201ENST00000215838 KDM4AO75164 1064 aa13.66□□□□□ -0.22
TCN2-201ENST00000215838 FAM184AQ8NB25 1140 aa13.66□□□□□ -0.22
TCN2-201ENST00000215838 C16orf45Q96MC5 204 aaPredicted RBP13.66□□□□□ -0.22
TCN2-201ENST00000215838 TMEM131LA2VDJ0 1609 aa13.66□□□□□ -0.22
TCN2-201ENST00000215838 VGFO15240 615 aaPredicted RBP13.65□□□□□ -0.22
TCN2-201ENST00000215838 TEX2Q8IWB9 1127 aa13.65□□□□□ -0.22
TCN2-201ENST00000215838 SIRT2Q8IXJ6 389 aa13.65□□□□□ -0.22
TCN2-201ENST00000215838 UGGT1Q9NYU2 1555 aa13.65□□□□□ -0.22
TCN2-201ENST00000215838 BRD1O95696 1058 aa13.65□□□□□ -0.22
TCN2-201ENST00000215838 KRT222Q8N1A0 295 aa13.65□□□□□ -0.22
TCN2-201ENST00000215838 ANKRD36BQ8N2N9 1353 aa13.65□□□□□ -0.22
TCN2-201ENST00000215838 CALCOCO1Q9P1Z2 691 aa13.65□□□□□ -0.22
TCN2-201ENST00000215838 IFT172Q9UG01 1749 aa13.65□□□□□ -0.22
TCN2-201ENST00000215838 PHF14O94880 888 aa13.64□□□□□ -0.23
TCN2-201ENST00000215838 CFAP70Q5T0N1 1121 aa13.64□□□□□ -0.23
TCN2-201ENST00000215838 USP48Q86UV5 1035 aa13.64□□□□□ -0.23
TCN2-201ENST00000215838 MORC1Q86VD1 984 aa13.64□□□□□ -0.23
TCN2-201ENST00000215838 SETD1BQ9UPS6 1966 aaKnown RBP13.64□□□□□ -0.23
TCN2-201ENST00000215838 UBR1Q8IWV7 1749 aa13.64□□□□□ -0.23
TCN2-201ENST00000215838 NOL8Q76FK4 1167 aaKnown RBP13.64□□□□□ -0.23
TCN2-201ENST00000215838 GCC1Q96CN9 775 aa13.64□□□□□ -0.23
TCN2-201ENST00000215838 C16orf71Q8IYS4 520 aaPredicted RBP13.63□□□□□ -0.23
TCN2-201ENST00000215838 FEZ2Q9UHY8 353 aaPredicted RBP13.63□□□□□ -0.23
TCN2-201ENST00000215838 A2ML1A8K2U0 1454 aa13.63□□□□□ -0.23
TCN2-201ENST00000215838 MTHFSP49914 203 aa13.63□□□□□ -0.23
TCN2-201ENST00000215838 KMT5BQ4FZB7 885 aa13.63□□□□□ -0.23
TCN2-201ENST00000215838 TMX3Q96JJ7 454 aa13.63□□□□□ -0.23
TCN2-201ENST00000215838 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.63□□□□□ -0.23
TCN2-201ENST00000215838 V9GYY5 206 aaPredicted RBP13.63□□□□□ -0.23
TCN2-201ENST00000215838 CEP170BQ9Y4F5 1589 aaPredicted RBP13.62□□□□□ -0.23
TCN2-201ENST00000215838 CHRM1P11229 460 aaPredicted RBP13.62□□□□□ -0.23
TCN2-201ENST00000215838 PTGS1P23219 599 aa13.62□□□□□ -0.23
TCN2-201ENST00000215838 PLEKHM2Q8IWE5 1019 aa13.62□□□□□ -0.23
TCN2-201ENST00000215838 U2AF1L5P0DN76 240 aaPredicted RBP13.62□□□□□ -0.23
TCN2-201ENST00000215838 HNRNPH2P55795 449 aaKnown RBP13.62□□□□□ -0.23
TCN2-201ENST00000215838 U2AF1Q01081 240 aaKnown RBP eCLIP13.62□□□□□ -0.23
TCN2-201ENST00000215838 FBXO31Q5XUX0 539 aaPredicted RBP13.62□□□□□ -0.23
TCN2-201ENST00000215838 LRMPQ12912 555 aa13.61□□□□□ -0.23
TCN2-201ENST00000215838 PPLO60437 1756 aa13.61□□□□□ -0.23
TCN2-201ENST00000215838 KDM4FA0A1W2PPD8 638 aa13.61□□□□□ -0.23
TCN2-201ENST00000215838 SMTNL1A8MU46 457 aa13.61□□□□□ -0.23
TCN2-201ENST00000215838 ZBTB7BO15156 539 aaPredicted RBP13.61□□□□□ -0.23
TCN2-201ENST00000215838 CT47B1P0C2W7 299 aaPredicted RBP13.61□□□□□ -0.23
TCN2-201ENST00000215838 SYCP1Q15431 976 aa13.61□□□□□ -0.23
TCN2-201ENST00000215838 OTUD7AQ8TE49 926 aaPredicted RBP13.61□□□□□ -0.23
TCN2-201ENST00000215838 MYO5BQ9ULV0 1848 aa13.61□□□□□ -0.23
TCN2-201ENST00000215838 U2SURPO15042 1029 aaKnown RBP13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms