RNA–Protein interactions for RNA: ENSMUST00000213114.1

Ldlr-202, Transcript of Low-density lipoprotein receptor, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ldlr, Length 4,318 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldlr-202ENSMUST00000213114 Trim30aP15533 496 aa11.32□□□□□ -0.6
Ldlr-202ENSMUST00000213114 Stard3nlQ9DCI3 235 aa11.32□□□□□ -0.6
Ldlr-202ENSMUST00000213114 Tex14Q7M6U3 1450 aa11.32□□□□□ -0.6
Ldlr-202ENSMUST00000213114 Gli2Q0VGT2 1544 aa11.32□□□□□ -0.6
Ldlr-202ENSMUST00000213114 Cplx2P84086 134 aa11.32□□□□□ -0.6
Ldlr-202ENSMUST00000213114 Plekhd1B2RPU2 505 aa11.31□□□□□ -0.6
Ldlr-202ENSMUST00000213114 Ccdc155Q80VJ8 648 aa11.31□□□□□ -0.6
Ldlr-202ENSMUST00000213114 Catsper2A2ARP9 588 aa11.31□□□□□ -0.6
Ldlr-202ENSMUST00000213114 Hoxb7P09024 217 aa11.31□□□□□ -0.6
Ldlr-202ENSMUST00000213114 Fam208aQ69ZR9 1610 aaKnown RBP11.31□□□□□ -0.6
Ldlr-202ENSMUST00000213114 Lrrc7Q80TE7 1490 aa11.31□□□□□ -0.6
Ldlr-202ENSMUST00000213114 Brd1E9PZ26 1189 aaKnown RBP11.31□□□□□ -0.6
Ldlr-202ENSMUST00000213114 BccipQ9CWI3 316 aa11.31□□□□□ -0.6
Ldlr-202ENSMUST00000213114 Sytl4Q9R0Q1 673 aa11.31□□□□□ -0.6
Ldlr-202ENSMUST00000213114 Pprc1Q6NZN1 1644 aa11.31□□□□□ -0.6
Ldlr-202ENSMUST00000213114 Cplx1P63040 134 aa11.31□□□□□ -0.6
Ldlr-202ENSMUST00000213114 Brf1Q8CFK2 676 aa11.31□□□□□ -0.6
Ldlr-202ENSMUST00000213114 Naip7Q9JIB3 1402 aa11.31□□□□□ -0.6
Ldlr-202ENSMUST00000213114 Tpd52l1O54818 204 aa11.3□□□□□ -0.6
Ldlr-202ENSMUST00000213114 Tarbp1E9Q368 1579 aa11.3□□□□□ -0.6
Ldlr-202ENSMUST00000213114 AU022751B1B0V2 589 aa11.3□□□□□ -0.6
Ldlr-202ENSMUST00000213114 Cnnm3Q32NY4 713 aa11.3□□□□□ -0.6
Ldlr-202ENSMUST00000213114 Q4VA45 678 aa11.3□□□□□ -0.6
Ldlr-202ENSMUST00000213114 Slc26a8Q8R0C3 999 aa11.3□□□□□ -0.6
Ldlr-202ENSMUST00000213114 Hnrnpul1Q8VDM6 859 aaKnown RBP11.3□□□□□ -0.6
Ldlr-202ENSMUST00000213114 Gtf2a1Q99PM3 378 aa11.3□□□□□ -0.6
Ldlr-202ENSMUST00000213114 Map3k19E9Q3S4 1311 aa11.3□□□□□ -0.6
Ldlr-202ENSMUST00000213114 Calcoco2A2A6M5 331 aa11.29□□□□□ -0.6
Ldlr-202ENSMUST00000213114 Pof1bQ8K4L4 587 aa11.29□□□□□ -0.6
Ldlr-202ENSMUST00000213114 Ccdc47Q9D024 483 aaKnown RBP11.29□□□□□ -0.6
Ldlr-202ENSMUST00000213114 Eif3aP23116 1344 aaKnown RBP11.29□□□□□ -0.6
Ldlr-202ENSMUST00000213114 Znf608Q56A10 1511 aa11.29□□□□□ -0.6
Ldlr-202ENSMUST00000213114 Ttc19Q8CC21 365 aa11.29□□□□□ -0.6
Ldlr-202ENSMUST00000213114 Amotl2Q8K371 772 aa11.29□□□□□ -0.6
Ldlr-202ENSMUST00000213114 Tmc1Q8R4P5 757 aa11.29□□□□□ -0.6
Ldlr-202ENSMUST00000213114 Farp2Q91VS8 1065 aa11.29□□□□□ -0.6
Ldlr-202ENSMUST00000213114 Tshz3Q8CGV9 1081 aa11.29□□□□□ -0.6
Ldlr-202ENSMUST00000213114 Eif3bQ8JZQ9 803 aaKnown RBP11.29□□□□□ -0.6
Ldlr-202ENSMUST00000213114 TimelessQ9R1X4 1197 aa11.29□□□□□ -0.6
Ldlr-202ENSMUST00000213114 Setd1bQ8CFT2 1985 aa11.29□□□□□ -0.6
Ldlr-202ENSMUST00000213114 ApobrQ8VBT6 942 aa11.28□□□□□ -0.6
Ldlr-202ENSMUST00000213114 Frmpd2A0A140LI67 1392 aa11.28□□□□□ -0.6
Ldlr-202ENSMUST00000213114 Anapc15-psA0A140T8L6 141 aa11.28□□□□□ -0.6
Ldlr-202ENSMUST00000213114 Zap70P43404 618 aa11.28□□□□□ -0.6
Ldlr-202ENSMUST00000213114 Isy1Q69ZQ2 285 aaKnown RBP11.28□□□□□ -0.6
Ldlr-202ENSMUST00000213114 Rbm5Q91YE7 815 aaKnown RBP11.28□□□□□ -0.6
Ldlr-202ENSMUST00000213114 Phf14Q9D4H9 881 aa11.28□□□□□ -0.6
Ldlr-202ENSMUST00000213114 Mroh2aD3Z750 1679 aa11.28□□□□□ -0.6
Ldlr-202ENSMUST00000213114 LifrP42703 1092 aa11.28□□□□□ -0.6
Ldlr-202ENSMUST00000213114 Skint5A7XUY5 1461 aa11.27□□□□□ -0.6
Ldlr-202ENSMUST00000213114 Noc3lQ8VI84 807 aaKnown RBP11.27□□□□□ -0.6
Ldlr-202ENSMUST00000213114 NaspQ99MD9 773 aaKnown RBP11.27□□□□□ -0.61
Ldlr-202ENSMUST00000213114 Syce3B5KM66 88 aa11.27□□□□□ -0.61
Ldlr-202ENSMUST00000213114 Pnmal2G3X9N3 661 aa11.27□□□□□ -0.61
Ldlr-202ENSMUST00000213114 Aifm3Q3TY86 605 aa11.27□□□□□ -0.61
Ldlr-202ENSMUST00000213114 Dixdc1Q80Y83 711 aa11.27□□□□□ -0.61
Ldlr-202ENSMUST00000213114 ZgpatQ8VDM1 511 aa11.27□□□□□ -0.61
Ldlr-202ENSMUST00000213114 Kiaa1107Q80TK0 1369 aa11.27□□□□□ -0.61
Ldlr-202ENSMUST00000213114 Map7d2A2AG50 781 aa11.26□□□□□ -0.61
Ldlr-202ENSMUST00000213114 Cct4P80315 539 aaKnown RBP11.26□□□□□ -0.61
Ldlr-202ENSMUST00000213114 Flad1Q8R123 492 aa11.26□□□□□ -0.61
Ldlr-202ENSMUST00000213114 Talpid3E9PV87 1520 aa11.26□□□□□ -0.61
Ldlr-202ENSMUST00000213114 Srek1Q8BZX4 494 aaKnown RBP11.26□□□□□ -0.61
Ldlr-202ENSMUST00000213114 Fam135bQ9DAI6 1403 aa11.26□□□□□ -0.61
Ldlr-202ENSMUST00000213114 EvcP57680 1005 aa11.26□□□□□ -0.61
Ldlr-202ENSMUST00000213114 Gjb2Q00977 226 aa11.26□□□□□ -0.61
Ldlr-202ENSMUST00000213114 Hook1Q8BIL5 728 aa11.26□□□□□ -0.61
Ldlr-202ENSMUST00000213114 CalcaP70160 136 aa11.26□□□□□ -0.61
Ldlr-202ENSMUST00000213114 Eya1P97767 591 aa11.26□□□□□ -0.61
Ldlr-202ENSMUST00000213114 Cavin2Q63918 418 aaKnown RBP11.26□□□□□ -0.61
Ldlr-202ENSMUST00000213114 Nol11Q8BJW5 723 aaKnown RBP11.26□□□□□ -0.61
Ldlr-202ENSMUST00000213114 Fhod3Q76LL6 1578 aa11.25□□□□□ -0.61
Ldlr-202ENSMUST00000213114 Ttc21aQ8C0S4 1314 aa11.25□□□□□ -0.61
Ldlr-202ENSMUST00000213114 Samd1D3YXK1 519 aa11.25□□□□□ -0.61
Ldlr-202ENSMUST00000213114 Dzip1Q8BMD2 852 aa11.25□□□□□ -0.61
Ldlr-202ENSMUST00000213114 Olfml1Q8BSH2 233 aa11.25□□□□□ -0.61
Ldlr-202ENSMUST00000213114 Cfap99A0A140LIX9 648 aa11.25□□□□□ -0.61
Ldlr-202ENSMUST00000213114 Znf692Q3U381 531 aa11.25□□□□□ -0.61
Ldlr-202ENSMUST00000213114 Ankib1Q6ZPS6 1085 aa11.25□□□□□ -0.61
Ldlr-202ENSMUST00000213114 Tomm22Q9CPQ3 142 aa11.25□□□□□ -0.61
Ldlr-202ENSMUST00000213114 Scaf11E9PZM7 1456 aaKnown RBP11.25□□□□□ -0.61
Ldlr-202ENSMUST00000213114 Kif14L0N7N1 1674 aaKnown RBP11.25□□□□□ -0.61
Ldlr-202ENSMUST00000213114 Me1P06801 572 aa11.25□□□□□ -0.61
Ldlr-202ENSMUST00000213114 Fkbp5Q64378 456 aa11.25□□□□□ -0.61
Ldlr-202ENSMUST00000213114 Gpatch3Q8BIY1 525 aa11.25□□□□□ -0.61
Ldlr-202ENSMUST00000213114 Slc5a1Q8C3K6 665 aa11.25□□□□□ -0.61
Ldlr-202ENSMUST00000213114 Pik3r4Q8VD65 1358 aa11.25□□□□□ -0.61
Ldlr-202ENSMUST00000213114 Ccdc173A0JLY1 547 aa11.24□□□□□ -0.61
Ldlr-202ENSMUST00000213114 Gm10093D3YYI8 482 aa11.24□□□□□ -0.61
Ldlr-202ENSMUST00000213114 Snap23O09044 210 aa11.24□□□□□ -0.61
Ldlr-202ENSMUST00000213114 Hdac1O09106 482 aaKnown RBP11.24□□□□□ -0.61
Ldlr-202ENSMUST00000213114 Abl1P00520 1123 aa11.24□□□□□ -0.61
Ldlr-202ENSMUST00000213114 GpkowQ56A08 488 aa11.24□□□□□ -0.61
Ldlr-202ENSMUST00000213114 Rec8Q8C5S7 591 aa11.24□□□□□ -0.61
Ldlr-202ENSMUST00000213114 Bag4Q8CI61 457 aa11.24□□□□□ -0.61
Ldlr-202ENSMUST00000213114 Usp19Q3UJD6 1360 aa11.24□□□□□ -0.61
Ldlr-202ENSMUST00000213114 Dot1lQ6XZL8 1540 aa11.24□□□□□ -0.61
Ldlr-202ENSMUST00000213114 Hoxa7P02830 229 aa11.24□□□□□ -0.61
Ldlr-202ENSMUST00000213114 Map3k2Q61083 619 aa11.24□□□□□ -0.61
Ldlr-202ENSMUST00000213114 Rhot2Q8JZN7 620 aa11.24□□□□□ -0.61
Retrieved 100 of 22,080 RNA–protein pairs in 31 ms