RNA–Protein interactions for RNA: ENSMUST00000211140.1

Ptpre-207, Transcript of Receptor-type tyrosine-protein phosphatase epsilon, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Ptpre, Length 5,753 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptpre-207ENSMUST00000211140 Ssr1Q9CY50 286 aaKnown RBP20.1■□□□□ 0.81
Ptpre-207ENSMUST00000211140 Gimap6Q8K349 305 aa20.1■□□□□ 0.81
Ptpre-207ENSMUST00000211140 Ccdc83Q9D4V3 305 aa20.1■□□□□ 0.81
Ptpre-207ENSMUST00000211140 NrkQ9R0G8 1455 aa20.1■□□□□ 0.81
Ptpre-207ENSMUST00000211140 Map4k4P97820 1233 aaKnown RBP20.1■□□□□ 0.81
Ptpre-207ENSMUST00000211140 Speer4bQ9D9F7 267 aa20.1■□□□□ 0.81
Ptpre-207ENSMUST00000211140 Sos1Q62245 1319 aa20.1■□□□□ 0.81
Ptpre-207ENSMUST00000211140 Cct4P80315 539 aaKnown RBP20.1■□□□□ 0.81
Ptpre-207ENSMUST00000211140 Hvcn1Q3U2S8 269 aa20.1■□□□□ 0.81
Ptpre-207ENSMUST00000211140 Btbd11Q6GQW0 1109 aa20.1■□□□□ 0.81
Ptpre-207ENSMUST00000211140 Mipol1Q9D9F8 279 aa20.1■□□□□ 0.81
Ptpre-207ENSMUST00000211140 Gm21663A0A0G2JE01 267 aa20.09■□□□□ 0.81
Ptpre-207ENSMUST00000211140 5031410I06RikE9Q4E0 267 aa20.09■□□□□ 0.81
Ptpre-207ENSMUST00000211140 Gm1979E9QAN3 267 aa20.09■□□□□ 0.81
Ptpre-207ENSMUST00000211140 Gm5862K7N5V5 267 aa20.09■□□□□ 0.81
Ptpre-207ENSMUST00000211140 Gm10220K7N660 267 aa20.09■□□□□ 0.81
Ptpre-207ENSMUST00000211140 TmpoQ61033 693 aaKnown RBP20.09■□□□□ 0.81
Ptpre-207ENSMUST00000211140 Mcm3P25206 812 aaKnown RBP20.09■□□□□ 0.81
Ptpre-207ENSMUST00000211140 AidaQ8C4Q6 305 aa20.09■□□□□ 0.81
Ptpre-207ENSMUST00000211140 Gas2l3Q3UWW6 683 aa20.09■□□□□ 0.81
Ptpre-207ENSMUST00000211140 ZwintQ9CQU5 252 aa20.09■□□□□ 0.81
Ptpre-207ENSMUST00000211140 BbxQ8VBW5 907 aa20.08■□□□□ 0.81
Ptpre-207ENSMUST00000211140 Duox2A2AQ99 1517 aa20.08■□□□□ 0.8
Ptpre-207ENSMUST00000211140 Klf15Q9EPW2 415 aa20.07■□□□□ 0.8
Ptpre-207ENSMUST00000211140 Map3k1P53349 1493 aa20.07■□□□□ 0.8
Ptpre-207ENSMUST00000211140 Evi5lH3BKQ3 813 aa20.07■□□□□ 0.8
Ptpre-207ENSMUST00000211140 Pip4k2bQ80XI4 416 aa20.07■□□□□ 0.8
Ptpre-207ENSMUST00000211140 NinlQ6ZQ12 1394 aa20.06■□□□□ 0.8
Ptpre-207ENSMUST00000211140 Flad1Q8R123 492 aa20.06■□□□□ 0.8
Ptpre-207ENSMUST00000211140 Ell2Q3UKU1 639 aa20.06■□□□□ 0.8
Ptpre-207ENSMUST00000211140 Slc26a8Q8R0C3 999 aa20.06■□□□□ 0.8
Ptpre-207ENSMUST00000211140 TkfcQ8VC30 578 aa20.06■□□□□ 0.8
Ptpre-207ENSMUST00000211140 Urb2E9Q7L1 1524 aaKnown RBP20.06■□□□□ 0.8
Ptpre-207ENSMUST00000211140 Atxn3Q9CVD2 355 aa20.06■□□□□ 0.8
Ptpre-207ENSMUST00000211140 Dydc1Q9D9T0 175 aa20.06■□□□□ 0.8
Ptpre-207ENSMUST00000211140 Zbtb22Q9Z0G7 638 aa20.06■□□□□ 0.8
Ptpre-207ENSMUST00000211140 Nol7Q9D7Z3 254 aaKnown RBP20.05■□□□□ 0.8
Ptpre-207ENSMUST00000211140 Hs1bp3Q3TC93 395 aa20.05■□□□□ 0.8
Ptpre-207ENSMUST00000211140 Sf3b2Q3UJB0 878 aaKnown RBP20.05■□□□□ 0.8
Ptpre-207ENSMUST00000211140 Ccdc141E9Q8Q6 1531 aa20.05■□□□□ 0.8
Ptpre-207ENSMUST00000211140 Ddx19aQ61655 478 aaKnown RBP20.04■□□□□ 0.8
Ptpre-207ENSMUST00000211140 Asxl1P59598 1514 aa20.04■□□□□ 0.8
Ptpre-207ENSMUST00000211140 Golim4Q8BXA1 655 aa20.04■□□□□ 0.8
Ptpre-207ENSMUST00000211140 Mapk8ip1Q9WVI9 707 aa20.04■□□□□ 0.8
Ptpre-207ENSMUST00000211140 ScaperF8VQ70 1398 aaKnown RBP20.04■□□□□ 0.8
Ptpre-207ENSMUST00000211140 Rrs1Q9CYH6 365 aaKnown RBP20.04■□□□□ 0.8
Ptpre-207ENSMUST00000211140 Tspyl3Q3UYP3 334 aa20.04■□□□□ 0.8
Ptpre-207ENSMUST00000211140 Lrrfip1Q3UZ39 729 aaKnown RBP20.04■□□□□ 0.8
Ptpre-207ENSMUST00000211140 Gm21680A0A0G2JGR8 267 aa20.04■□□□□ 0.8
Ptpre-207ENSMUST00000211140 Plekhd1B2RPU2 505 aa20.03■□□□□ 0.8
Ptpre-207ENSMUST00000211140 TxlnaQ6PAM1 554 aaKnown RBP20.03■□□□□ 0.8
Ptpre-207ENSMUST00000211140 Jade2Q6ZQF7 829 aa20.03■□□□□ 0.8
Ptpre-207ENSMUST00000211140 Ppp1r42Q8R1Z4 357 aa20.03■□□□□ 0.8
Ptpre-207ENSMUST00000211140 Gm42641I6L9G2 585 aa20.03■□□□□ 0.8
Ptpre-207ENSMUST00000211140 AtripQ8BMG1 785 aa20.03■□□□□ 0.8
Ptpre-207ENSMUST00000211140 Ppp1r9bQ6R891 817 aaKnown RBP20.02■□□□□ 0.8
Ptpre-207ENSMUST00000211140 Trim34aQ99PP6 485 aa20.02■□□□□ 0.8
Ptpre-207ENSMUST00000211140 Uri1Q3TLD5 531 aa20.02■□□□□ 0.8
Ptpre-207ENSMUST00000211140 Fkbp5Q64378 456 aa20.02■□□□□ 0.8
Ptpre-207ENSMUST00000211140 Cfap69Q8BH53 942 aa20.02■□□□□ 0.8
Ptpre-207ENSMUST00000211140 Prkar2bP31324 416 aa20.02■□□□□ 0.8
Ptpre-207ENSMUST00000211140 TimelessQ9R1X4 1197 aa20.02■□□□□ 0.8
Ptpre-207ENSMUST00000211140 Stxbp4Q9WV89 557 aa20.02■□□□□ 0.8
Ptpre-207ENSMUST00000211140 Arglu1Q3UL36 271 aaKnown RBP20.02■□□□□ 0.79
Ptpre-207ENSMUST00000211140 Luzp1Q8R4U7 1068 aaKnown RBP20.01■□□□□ 0.79
Ptpre-207ENSMUST00000211140 Galntl5Q9D4M9 431 aa20.01■□□□□ 0.79
Ptpre-207ENSMUST00000211140 Cep131Q62036 1060 aa20.01■□□□□ 0.79
Ptpre-207ENSMUST00000211140 Ddx58Q6Q899 926 aa20.01■□□□□ 0.79
Ptpre-207ENSMUST00000211140 Plekhm2Q80TQ5 1018 aa20.01■□□□□ 0.79
Ptpre-207ENSMUST00000211140 Znf131Q8K3J5 619 aa20.01■□□□□ 0.79
Ptpre-207ENSMUST00000211140 Maats1Q8BRC6 783 aa20■□□□□ 0.79
Ptpre-207ENSMUST00000211140 4930572O03RikQ8C5Y0 211 aa20■□□□□ 0.79
Ptpre-207ENSMUST00000211140 AcrbpQ3V140 540 aa20■□□□□ 0.79
Ptpre-207ENSMUST00000211140 Tmc2Q8R4P4 888 aa20■□□□□ 0.79
Ptpre-207ENSMUST00000211140 Rasa1E9PYG6 1038 aa19.99■□□□□ 0.79
Ptpre-207ENSMUST00000211140 Lrrfip2Q91WK0 415 aa19.99■□□□□ 0.79
Ptpre-207ENSMUST00000211140 Kcnj4P52189 445 aa19.99■□□□□ 0.79
Ptpre-207ENSMUST00000211140 Pde1cQ64338 706 aa19.99■□□□□ 0.79
Ptpre-207ENSMUST00000211140 Trim11Q99PQ2 467 aa19.99■□□□□ 0.79
Ptpre-207ENSMUST00000211140 Exoc8Q6PGF7 716 aa19.99■□□□□ 0.79
Ptpre-207ENSMUST00000211140 Cep55Q8BT07 462 aa19.99■□□□□ 0.79
Ptpre-207ENSMUST00000211140 Jakmip3Q5DTN8 844 aa19.99■□□□□ 0.79
Ptpre-207ENSMUST00000211140 Riok1Q922Q2 567 aa19.99■□□□□ 0.79
Ptpre-207ENSMUST00000211140 Terf2O35144 541 aa19.98■□□□□ 0.79
Ptpre-207ENSMUST00000211140 Adcy5P84309 1262 aa19.98■□□□□ 0.79
Ptpre-207ENSMUST00000211140 Ncbp1Q3UYV9 790 aaKnown RBP19.98■□□□□ 0.79
Ptpre-207ENSMUST00000211140 Rapgef4Q9EQZ6 1011 aa19.98■□□□□ 0.79
Ptpre-207ENSMUST00000211140 Ncapg2Q6DFV1 1138 aa19.98■□□□□ 0.79
Ptpre-207ENSMUST00000211140 Ppp1r15aP17564 657 aa19.98■□□□□ 0.79
Ptpre-207ENSMUST00000211140 Tnni2P13412 182 aa19.98■□□□□ 0.79
Ptpre-207ENSMUST00000211140 Abcf1Q6P542 837 aaKnown RBP19.98■□□□□ 0.79
Ptpre-207ENSMUST00000211140 Afap1Q80YS6 731 aa19.98■□□□□ 0.79
Ptpre-207ENSMUST00000211140 Slc52a2Q9D8F3 450 aa19.98■□□□□ 0.79
Ptpre-207ENSMUST00000211140 Ccdc172Q810N9 267 aa19.98■□□□□ 0.79
Ptpre-207ENSMUST00000211140 TnikP83510 1323 aa19.97■□□□□ 0.79
Ptpre-207ENSMUST00000211140 Ccdc158Q8CDI6 1109 aa19.97■□□□□ 0.79
Ptpre-207ENSMUST00000211140 Mroh2bQ7M6Y6 1581 aa19.97■□□□□ 0.79
Ptpre-207ENSMUST00000211140 Ddx54Q8K4L0 874 aaKnown RBP19.97■□□□□ 0.79
Ptpre-207ENSMUST00000211140 Hspa4Q61316 841 aa19.97■□□□□ 0.79
Ptpre-207ENSMUST00000211140 Ankib1Q6ZPS6 1085 aa19.97■□□□□ 0.79
Retrieved 100 of 22,080 RNA–protein pairs in 22.7 ms