RNA–Protein interactions for RNA: ENSMUST00000173243.7

Ccdc28a-203, Transcript of Coiled-coil domain-containing 28A, mousemouse

TSL 5 BASIC

Gene Ccdc28a, Length 590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28a-203ENSMUST00000173243 Kdm2bQ6P1G2 1309 aa16.31■□□□□ 0.2
Ccdc28a-203ENSMUST00000173243 Bsdc1Q80Y55 427 aa16.31■□□□□ 0.2
Ccdc28a-203ENSMUST00000173243 Phkg2Q9DB30 406 aa16.31■□□□□ 0.2
Ccdc28a-203ENSMUST00000173243 Larp1Q6ZQ58 1072 aaKnown RBP16.3■□□□□ 0.2
Ccdc28a-203ENSMUST00000173243 Stk31Q99MW1 1018 aa16.3■□□□□ 0.2
Ccdc28a-203ENSMUST00000173243 Aox2Q5SGK3 1345 aa16.29■□□□□ 0.2
Ccdc28a-203ENSMUST00000173243 Erbb3Q61526 1339 aa16.29■□□□□ 0.2
Ccdc28a-203ENSMUST00000173243 Snapc4Q8BP86 1333 aa16.29■□□□□ 0.2
Ccdc28a-203ENSMUST00000173243 U2af1Q9D883 239 aaKnown RBP16.29■□□□□ 0.2
Ccdc28a-203ENSMUST00000173243 Rpgrip1lQ8CG73 1264 aa16.28■□□□□ 0.2
Ccdc28a-203ENSMUST00000173243 Iqcf3Q9D498 203 aa16.28■□□□□ 0.2
Ccdc28a-203ENSMUST00000173243 Shank3Q4ACU6 1730 aa16.28■□□□□ 0.2
Ccdc28a-203ENSMUST00000173243 Znf541Q0GGX2 1363 aa16.27■□□□□ 0.2
Ccdc28a-203ENSMUST00000173243 Larp1bA0A0A6YXJ7 370 aaKnown RBP16.27■□□□□ 0.2
Ccdc28a-203ENSMUST00000173243 Pim2Q62070 370 aa16.27■□□□□ 0.2
Ccdc28a-203ENSMUST00000173243 Q7TT23 1179 aa16.27■□□□□ 0.2
Ccdc28a-203ENSMUST00000173243 Slc5a1Q8C3K6 665 aa16.27■□□□□ 0.2
Ccdc28a-203ENSMUST00000173243 ApobrQ8VBT6 942 aa16.27■□□□□ 0.2
Ccdc28a-203ENSMUST00000173243 Pdzd9Q9D9M4 266 aa16.27■□□□□ 0.2
Ccdc28a-203ENSMUST00000173243 Crb1Q8VHS2 1405 aa16.27■□□□□ 0.19
Ccdc28a-203ENSMUST00000173243 Tjp1P39447 1745 aaKnown RBP16.26■□□□□ 0.19
Ccdc28a-203ENSMUST00000173243 Gm21663A0A0G2JE01 267 aa16.26■□□□□ 0.19
Ccdc28a-203ENSMUST00000173243 Gm7361D3Z6R1 267 aa16.26■□□□□ 0.19
Ccdc28a-203ENSMUST00000173243 5031410I06RikE9Q4E0 267 aa16.26■□□□□ 0.19
Ccdc28a-203ENSMUST00000173243 Gm1979E9QAN3 267 aa16.26■□□□□ 0.19
Ccdc28a-203ENSMUST00000173243 Gm5862K7N5V5 267 aa16.26■□□□□ 0.19
Ccdc28a-203ENSMUST00000173243 Gm10220K7N660 267 aa16.26■□□□□ 0.19
Ccdc28a-203ENSMUST00000173243 Mcm10Q0VBD2 885 aa16.26■□□□□ 0.19
Ccdc28a-203ENSMUST00000173243 Asic4Q7TNS7 539 aa16.26■□□□□ 0.19
Ccdc28a-203ENSMUST00000173243 Chmp7Q8R1T1 451 aa16.26■□□□□ 0.19
Ccdc28a-203ENSMUST00000173243 Ubr2Q6WKZ8 1755 aa16.26■□□□□ 0.19
Ccdc28a-203ENSMUST00000173243 Kiaa0319lQ8K135 1048 aa16.25■□□□□ 0.19
Ccdc28a-203ENSMUST00000173243 Ccnl1Q52KE7 532 aaKnown RBP16.24■□□□□ 0.19
Ccdc28a-203ENSMUST00000173243 TmpoQ61033 693 aaKnown RBP16.24■□□□□ 0.19
Ccdc28a-203ENSMUST00000173243 Q4VA45 678 aa16.23■□□□□ 0.19
Ccdc28a-203ENSMUST00000173243 Plin1Q8CGN5 517 aa16.23■□□□□ 0.19
Ccdc28a-203ENSMUST00000173243 Abcc12Q80WJ6 1366 aa16.23■□□□□ 0.19
Ccdc28a-203ENSMUST00000173243 Wwc2Q6NXJ0 1187 aa16.22■□□□□ 0.19
Ccdc28a-203ENSMUST00000173243 Exoc6Q8R313 802 aa16.22■□□□□ 0.19
Ccdc28a-203ENSMUST00000173243 Myo5bP21271 1818 aa16.22■□□□□ 0.19
Ccdc28a-203ENSMUST00000173243 Klc3Q91W40 508 aa16.21■□□□□ 0.19
Ccdc28a-203ENSMUST00000173243 Hdac6Q9Z2V5 1149 aa16.21■□□□□ 0.19
Ccdc28a-203ENSMUST00000173243 Ankrd13dQ6PD24 605 aa16.2■□□□□ 0.18
Ccdc28a-203ENSMUST00000173243 Map4k4P97820 1233 aaKnown RBP16.19■□□□□ 0.18
Ccdc28a-203ENSMUST00000173243 Ezh2Q61188 746 aaKnown RBP16.19■□□□□ 0.18
Ccdc28a-203ENSMUST00000173243 Ints5Q8CHT3 1018 aa16.19■□□□□ 0.18
Ccdc28a-203ENSMUST00000173243 Ildr2B5TVM2 661 aa16.18■□□□□ 0.18
Ccdc28a-203ENSMUST00000173243 Zscan21Q07231 555 aa16.18■□□□□ 0.18
Ccdc28a-203ENSMUST00000173243 Cabp2Q9JLK4 216 aa16.18■□□□□ 0.18
Ccdc28a-203ENSMUST00000173243 Mapk8ip3Q9ESN9 1337 aa16.18■□□□□ 0.18
Ccdc28a-203ENSMUST00000173243 Akt1s1Q9D1F4 257 aa16.17■□□□□ 0.18
Ccdc28a-203ENSMUST00000173243 Ric1Q69ZJ7 1422 aa16.17■□□□□ 0.18
Ccdc28a-203ENSMUST00000173243 Usp19Q3UJD6 1360 aa16.16■□□□□ 0.18
Ccdc28a-203ENSMUST00000173243 Jmjd4Q8BFT6 427 aa16.16■□□□□ 0.18
Ccdc28a-203ENSMUST00000173243 Q8BT18 775 aa16.15■□□□□ 0.18
Ccdc28a-203ENSMUST00000173243 Ciz1Q8VEH2 845 aa16.15■□□□□ 0.18
Ccdc28a-203ENSMUST00000173243 CoblQ5NBX1 1337 aaKnown RBP16.15■□□□□ 0.18
Ccdc28a-203ENSMUST00000173243 Sos1Q62245 1319 aa16.15■□□□□ 0.18
Ccdc28a-203ENSMUST00000173243 Rtf1A2AQ19 715 aaKnown RBP16.14■□□□□ 0.17
Ccdc28a-203ENSMUST00000173243 Tcerg1Q8CGF7 1100 aaKnown RBP16.14■□□□□ 0.17
Ccdc28a-203ENSMUST00000173243 Atg3Q9CPX6 314 aa16.14■□□□□ 0.17
Ccdc28a-203ENSMUST00000173243 Cavin4A2AMM0 362 aa16.13■□□□□ 0.17
Ccdc28a-203ENSMUST00000173243 Apaf1O88879 1249 aa16.13■□□□□ 0.17
Ccdc28a-203ENSMUST00000173243 Golga2Q921M4 999 aa16.13■□□□□ 0.17
Ccdc28a-203ENSMUST00000173243 Kndc1Q0KK55 1742 aa16.13■□□□□ 0.17
Ccdc28a-203ENSMUST00000173243 Tiam2Q6ZPF3 1715 aa16.13■□□□□ 0.17
Ccdc28a-203ENSMUST00000173243 Igsf1Q7TQA1 1317 aa16.13■□□□□ 0.17
Ccdc28a-203ENSMUST00000173243 Ncbp3Q8BZR9 615 aaKnown RBP16.12■□□□□ 0.17
Ccdc28a-203ENSMUST00000173243 Uhrf1bp1B2KF50 1429 aa16.11■□□□□ 0.17
Ccdc28a-203ENSMUST00000173243 Kif23E9Q5G3 953 aa16.11■□□□□ 0.17
Ccdc28a-203ENSMUST00000173243 Nkx2-3P97334 362 aa16.11■□□□□ 0.17
Ccdc28a-203ENSMUST00000173243 Dcaf5Q80T85 946 aa16.11■□□□□ 0.17
Ccdc28a-203ENSMUST00000173243 Adcy9P51830 1353 aa16.11■□□□□ 0.17
Ccdc28a-203ENSMUST00000173243 Msh6P54276 1358 aaKnown RBP16.11■□□□□ 0.17
Ccdc28a-203ENSMUST00000173243 Snap23O09044 210 aa16.1■□□□□ 0.17
Ccdc28a-203ENSMUST00000173243 Fam198bQ3UPI1 517 aa16.1■□□□□ 0.17
Ccdc28a-203ENSMUST00000173243 AceP09470 1312 aa16.1■□□□□ 0.17
Ccdc28a-203ENSMUST00000173243 Swt1Q9DBQ9 907 aa16.09■□□□□ 0.17
Ccdc28a-203ENSMUST00000173243 Zfyve9A2A8R0 1397 aa16.09■□□□□ 0.17
Ccdc28a-203ENSMUST00000173243 Pde4dQ01063 747 aa16.08■□□□□ 0.16
Ccdc28a-203ENSMUST00000173243 Mrs2Q5NCE8 434 aa16.08■□□□□ 0.16
Ccdc28a-203ENSMUST00000173243 Ccdc155Q80VJ8 648 aa16.08■□□□□ 0.16
Ccdc28a-203ENSMUST00000173243 Gpr150Q8BL07 427 aa16.08■□□□□ 0.16
Ccdc28a-203ENSMUST00000173243 Esx1O88933 382 aa16.07■□□□□ 0.16
Ccdc28a-203ENSMUST00000173243 NppbP40753 121 aa16.07■□□□□ 0.16
Ccdc28a-203ENSMUST00000173243 Uspl1Q3ULM6 1089 aa16.07■□□□□ 0.16
Ccdc28a-203ENSMUST00000173243 Smg7Q5RJH6 1138 aaKnown RBP16.07■□□□□ 0.16
Ccdc28a-203ENSMUST00000173243 Cap2Q9CYT6 476 aa16.07■□□□□ 0.16
Ccdc28a-203ENSMUST00000173243 Spata31d1bE9QA57 1361 aa16.06■□□□□ 0.16
Ccdc28a-203ENSMUST00000173243 Bicdl1A0JNT9 577 aa16.06■□□□□ 0.16
Ccdc28a-203ENSMUST00000173243 MeiocA2AG06 965 aa16.06■□□□□ 0.16
Ccdc28a-203ENSMUST00000173243 Cers3Q1A3B0 383 aa16.06■□□□□ 0.16
Ccdc28a-203ENSMUST00000173243 Efcab2Q9CQ46 164 aa16.06■□□□□ 0.16
Ccdc28a-203ENSMUST00000173243 Sall2Q9QX96 1004 aa16.06■□□□□ 0.16
Ccdc28a-203ENSMUST00000173243 C4bP01029 1738 aa16.05■□□□□ 0.16
Ccdc28a-203ENSMUST00000173243 Btbd11Q6GQW0 1109 aa16.05■□□□□ 0.16
Ccdc28a-203ENSMUST00000173243 Trpc5Q9QX29 975 aa16.05■□□□□ 0.16
Ccdc28a-203ENSMUST00000173243 Nav1Q8CH77 1875 aa16.04■□□□□ 0.16
Ccdc28a-203ENSMUST00000173243 Ccdc85cE9Q6B2 420 aa16.04■□□□□ 0.16
Ccdc28a-203ENSMUST00000173243 Mylk2Q8VCR8 613 aa16.04■□□□□ 0.16
Retrieved 100 of 22,080 RNA–protein pairs in 11.2 ms