RNA–Protein interactions for RNA: ENSMUST00000111051.9

Bdnf-210, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 4,125 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-210ENSMUST00000111051 Bloc1s4Q8VED2 215 aa10.09□□□□□ -0.79
Bdnf-210ENSMUST00000111051 Elp1Q7TT37 1333 aaKnown RBP10.09□□□□□ -0.79
Bdnf-210ENSMUST00000111051 Rnf17Q99MV7 1640 aa10.09□□□□□ -0.79
Bdnf-210ENSMUST00000111051 Hfm1D3Z4R1 1434 aa10.09□□□□□ -0.79
Bdnf-210ENSMUST00000111051 NcapgE9PWG6 1004 aa10.09□□□□□ -0.79
Bdnf-210ENSMUST00000111051 Tmx3Q8BXZ1 456 aa10.09□□□□□ -0.79
Bdnf-210ENSMUST00000111051 Hmgn5Q9JL35 406 aa10.09□□□□□ -0.79
Bdnf-210ENSMUST00000111051 Uggt2E9Q4X2 1504 aa10.09□□□□□ -0.79
Bdnf-210ENSMUST00000111051 Nsd3Q6P2L6 1439 aa10.08□□□□□ -0.8
Bdnf-210ENSMUST00000111051 Mad1l1Q9WTX8 717 aaKnown RBP10.08□□□□□ -0.8
Bdnf-210ENSMUST00000111051 CrebrfQ8CDG5 640 aaKnown RBP10.08□□□□□ -0.8
Bdnf-210ENSMUST00000111051 Plxnc1Q9QZC2 1574 aa10.08□□□□□ -0.8
Bdnf-210ENSMUST00000111051 Strn4P58404 760 aa10.08□□□□□ -0.8
Bdnf-210ENSMUST00000111051 Gse1Q3U3C9 1213 aa10.08□□□□□ -0.8
Bdnf-210ENSMUST00000111051 Usp48Q3V0C5 1052 aa10.08□□□□□ -0.8
Bdnf-210ENSMUST00000111051 Ddx19aQ61655 478 aaKnown RBP10.08□□□□□ -0.8
Bdnf-210ENSMUST00000111051 LlphQ9D945 130 aaKnown RBP10.08□□□□□ -0.8
Bdnf-210ENSMUST00000111051 Q9D9S1 216 aa10.08□□□□□ -0.8
Bdnf-210ENSMUST00000111051 Mcm10Q0VBD2 885 aa10.07□□□□□ -0.8
Bdnf-210ENSMUST00000111051 Ppp1r42Q8R1Z4 357 aa10.07□□□□□ -0.8
Bdnf-210ENSMUST00000111051 Med4Q9CQA5 270 aa10.07□□□□□ -0.8
Bdnf-210ENSMUST00000111051 Talpid3E9PV87 1520 aa10.07□□□□□ -0.8
Bdnf-210ENSMUST00000111051 Tpd52l1O54818 204 aa10.07□□□□□ -0.8
Bdnf-210ENSMUST00000111051 NaspQ99MD9 773 aaKnown RBP10.07□□□□□ -0.8
Bdnf-210ENSMUST00000111051 Stk3Q9JI10 497 aa10.07□□□□□ -0.8
Bdnf-210ENSMUST00000111051 SrrtQ99MR6 875 aaKnown RBP10.07□□□□□ -0.8
Bdnf-210ENSMUST00000111051 Bcar3Q9QZK2 820 aa10.07□□□□□ -0.8
Bdnf-210ENSMUST00000111051 Psma5Q9Z2U1 241 aaKnown RBP10.07□□□□□ -0.8
Bdnf-210ENSMUST00000111051 Eif2ak4Q9QZ05 1648 aa10.07□□□□□ -0.8
Bdnf-210ENSMUST00000111051 Rsph6aQ8CDR2 708 aa10.06□□□□□ -0.8
Bdnf-210ENSMUST00000111051 P2rx7Q9Z1M0 595 aa10.06□□□□□ -0.8
Bdnf-210ENSMUST00000111051 PnnO35691 725 aaKnown RBP10.06□□□□□ -0.8
Bdnf-210ENSMUST00000111051 Bicd2Q921C5 820 aa10.06□□□□□ -0.8
Bdnf-210ENSMUST00000111051 Nsfl1cQ9CZ44 370 aaKnown RBP10.06□□□□□ -0.8
Bdnf-210ENSMUST00000111051 Myo3aQ8K3H5 1613 aa10.06□□□□□ -0.8
Bdnf-210ENSMUST00000111051 Pik3r4Q8VD65 1358 aa10.06□□□□□ -0.8
Bdnf-210ENSMUST00000111051 Anapc15P60007 132 aa10.05□□□□□ -0.8
Bdnf-210ENSMUST00000111051 Polr3gQ6NXY9 223 aa10.05□□□□□ -0.8
Bdnf-210ENSMUST00000111051 Plcd3Q8K2J0 785 aa10.05□□□□□ -0.8
Bdnf-210ENSMUST00000111051 PhaxQ9JJT9 385 aaKnown RBP10.05□□□□□ -0.8
Bdnf-210ENSMUST00000111051 AcrbpQ3V140 540 aa10.05□□□□□ -0.8
Bdnf-210ENSMUST00000111051 Ccer1Q9CQL2 403 aa10.05□□□□□ -0.8
Bdnf-210ENSMUST00000111051 Fbxo3Q9DC63 480 aa10.05□□□□□ -0.8
Bdnf-210ENSMUST00000111051 Hecw1Q8K4P8 1604 aa10.05□□□□□ -0.8
Bdnf-210ENSMUST00000111051 EvcP57680 1005 aa10.05□□□□□ -0.8
Bdnf-210ENSMUST00000111051 Top1mtQ8R4U6 593 aa10.05□□□□□ -0.8
Bdnf-210ENSMUST00000111051 Dnmt1P13864 1620 aaKnown RBP10.05□□□□□ -0.8
Bdnf-210ENSMUST00000111051 Abcc3B2RX12 1523 aa10.05□□□□□ -0.8
Bdnf-210ENSMUST00000111051 Uggt1Q6P5E4 1551 aa10.05□□□□□ -0.8
Bdnf-210ENSMUST00000111051 Klhdc4Q921I2 584 aa10.05□□□□□ -0.8
Bdnf-210ENSMUST00000111051 Gli2Q0VGT2 1544 aa10.04□□□□□ -0.8
Bdnf-210ENSMUST00000111051 Cpa2Q504N0 417 aa10.04□□□□□ -0.8
Bdnf-210ENSMUST00000111051 Nop14Q8R3N1 860 aaKnown RBP10.04□□□□□ -0.8
Bdnf-210ENSMUST00000111051 Noc3lQ8VI84 807 aaKnown RBP10.04□□□□□ -0.8
Bdnf-210ENSMUST00000111051 Gm32742A0A1B0GT42 1604 aa10.04□□□□□ -0.8
Bdnf-210ENSMUST00000111051 Calcoco2A2A6M5 331 aa10.04□□□□□ -0.8
Bdnf-210ENSMUST00000111051 AU022751B1B0V2 589 aa10.04□□□□□ -0.8
Bdnf-210ENSMUST00000111051 Mphosph10Q810V0 681 aaKnown RBP10.04□□□□□ -0.8
Bdnf-210ENSMUST00000111051 Lrriq1Q0P5X1 1673 aa10.04□□□□□ -0.8
Bdnf-210ENSMUST00000111051 PsapQ61207 557 aaKnown RBP10.04□□□□□ -0.8
Bdnf-210ENSMUST00000111051 Dennd6aQ8BH65 605 aa10.04□□□□□ -0.8
Bdnf-210ENSMUST00000111051 Ppp6r3Q922D4 844 aa10.04□□□□□ -0.8
Bdnf-210ENSMUST00000111051 Cct4P80315 539 aaKnown RBP10.03□□□□□ -0.8
Bdnf-210ENSMUST00000111051 Taf3Q5HZG4 932 aa10.03□□□□□ -0.8
Bdnf-210ENSMUST00000111051 Tubb6Q922F4 447 aa10.03□□□□□ -0.8
Bdnf-210ENSMUST00000111051 HnrnpmQ9D0E1 729 aaKnown RBP10.03□□□□□ -0.8
Bdnf-210ENSMUST00000111051 Cyp27a1Q9DBG1 533 aa10.03□□□□□ -0.8
Bdnf-210ENSMUST00000111051 Prrc2bQ7TPM1 1486 aaKnown RBP10.03□□□□□ -0.8
Bdnf-210ENSMUST00000111051 Trim28Q62318 834 aa10.03□□□□□ -0.8
Bdnf-210ENSMUST00000111051 Cdkn1cP49919 348 aa10.02□□□□□ -0.8
Bdnf-210ENSMUST00000111051 Gjb2Q00977 226 aa10.02□□□□□ -0.81
Bdnf-210ENSMUST00000111051 Hvcn1Q3U2S8 269 aa10.02□□□□□ -0.81
Bdnf-210ENSMUST00000111051 Nup88Q8CEC0 753 aaKnown RBP10.02□□□□□ -0.81
Bdnf-210ENSMUST00000111051 BbxQ8VBW5 907 aa10.02□□□□□ -0.81
Bdnf-210ENSMUST00000111051 Cep152A2AUM9 1736 aaKnown RBP10.02□□□□□ -0.81
Bdnf-210ENSMUST00000111051 Efcab6Q6P1E8 1516 aa10.02□□□□□ -0.81
Bdnf-210ENSMUST00000111051 Itsn2Q9Z0R6 1659 aa10.02□□□□□ -0.81
Bdnf-210ENSMUST00000111051 Babam1Q3UI43 333 aa10.02□□□□□ -0.81
Bdnf-210ENSMUST00000111051 Dixdc1Q80Y83 711 aa10.02□□□□□ -0.81
Bdnf-210ENSMUST00000111051 Samm50Q8BGH2 469 aa10.02□□□□□ -0.81
Bdnf-210ENSMUST00000111051 Ubxn4Q8VCH8 506 aa10.02□□□□□ -0.81
Bdnf-210ENSMUST00000111051 Tm6sf1P58749 370 aa10.01□□□□□ -0.81
Bdnf-210ENSMUST00000111051 Nos1Q9Z0J4 1429 aa10.01□□□□□ -0.81
Bdnf-210ENSMUST00000111051 Rims1Q99NE5 1463 aa10.01□□□□□ -0.81
Bdnf-210ENSMUST00000111051 Larp1bA0A0A6YXJ7 370 aaKnown RBP10.01□□□□□ -0.81
Bdnf-210ENSMUST00000111051 Cnnm3Q32NY4 713 aa10.01□□□□□ -0.81
Bdnf-210ENSMUST00000111051 Pof1bQ8K4L4 587 aa10.01□□□□□ -0.81
Bdnf-210ENSMUST00000111051 Eif3aP23116 1344 aaKnown RBP10.01□□□□□ -0.81
Bdnf-210ENSMUST00000111051 Kdm4aQ8BW72 1064 aa10.01□□□□□ -0.81
Bdnf-210ENSMUST00000111051 TatQ8QZR1 454 aa10.01□□□□□ -0.81
Bdnf-210ENSMUST00000111051 Gm45015A0A140LII9 184 aa10□□□□□ -0.81
Bdnf-210ENSMUST00000111051 Gm18336A0A140LIU8 765 aa10□□□□□ -0.81
Bdnf-210ENSMUST00000111051 Map3k19E9Q3S4 1311 aa10□□□□□ -0.81
Bdnf-210ENSMUST00000111051 Zkscan16A2ALW2 728 aa10□□□□□ -0.81
Bdnf-210ENSMUST00000111051 Eif4a2P10630 407 aa10□□□□□ -0.81
Bdnf-210ENSMUST00000111051 Q4VA45 678 aa10□□□□□ -0.81
Bdnf-210ENSMUST00000111051 Ppp6r1Q7TSI3 856 aa10□□□□□ -0.81
Bdnf-210ENSMUST00000111051 Srek1Q8BZX4 494 aaKnown RBP10□□□□□ -0.81
Bdnf-210ENSMUST00000111051 Fam13bQ8K2H3 851 aa10□□□□□ -0.81
Bdnf-210ENSMUST00000111051 Ube2hP62257 183 aa10□□□□□ -0.81
Retrieved 100 of 22,080 RNA–protein pairs in 11.5 ms