RNA–Protein interactions for RNA: ENSMUST00000110301.1

Clcn3-204, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 4,099 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-204ENSMUST00000110301 CgnP59242 1191 aa16.33■□□□□ 0.2
Clcn3-204ENSMUST00000110301 Mcm2P97310 904 aa16.33■□□□□ 0.2
Clcn3-204ENSMUST00000110301 Ankib1Q6ZPS6 1085 aa16.33■□□□□ 0.2
Clcn3-204ENSMUST00000110301 Amotl1Q9D4H4 968 aa16.33■□□□□ 0.2
Clcn3-204ENSMUST00000110301 Zeb2Q9R0G7 1215 aa16.33■□□□□ 0.2
Clcn3-204ENSMUST00000110301 Adgrb3Q80ZF8 1522 aa16.33■□□□□ 0.2
Clcn3-204ENSMUST00000110301 Zap70P43404 618 aa16.32■□□□□ 0.2
Clcn3-204ENSMUST00000110301 Eva1cP58659 440 aa16.32■□□□□ 0.2
Clcn3-204ENSMUST00000110301 Nol8Q3UHX0 1147 aaKnown RBP16.32■□□□□ 0.2
Clcn3-204ENSMUST00000110301 Aifm3Q3TY86 605 aa16.32■□□□□ 0.2
Clcn3-204ENSMUST00000110301 Erc2Q6PH08 957 aa16.32■□□□□ 0.2
Clcn3-204ENSMUST00000110301 Uggt1Q6P5E4 1551 aa16.32■□□□□ 0.2
Clcn3-204ENSMUST00000110301 Wdr17E9Q271 1322 aa16.32■□□□□ 0.2
Clcn3-204ENSMUST00000110301 Abca9Q8K449 1623 aa16.32■□□□□ 0.2
Clcn3-204ENSMUST00000110301 Casc1Q6TDU8 730 aa16.31■□□□□ 0.2
Clcn3-204ENSMUST00000110301 Slc5a4bQ91ZP4 660 aa16.31■□□□□ 0.2
Clcn3-204ENSMUST00000110301 Plekhg1F6S200 1446 aa16.31■□□□□ 0.2
Clcn3-204ENSMUST00000110301 Clasp1Q80TV8 1535 aaKnown RBP16.31■□□□□ 0.2
Clcn3-204ENSMUST00000110301 Irx3P81067 507 aa16.3■□□□□ 0.2
Clcn3-204ENSMUST00000110301 Trim44Q9QXA7 346 aa16.3■□□□□ 0.2
Clcn3-204ENSMUST00000110301 Uhrf1bp1lA2RSJ4 1457 aa16.3■□□□□ 0.2
Clcn3-204ENSMUST00000110301 Tom1O88746 492 aa16.3■□□□□ 0.2
Clcn3-204ENSMUST00000110301 Liat1Q810M6 228 aa16.3■□□□□ 0.2
Clcn3-204ENSMUST00000110301 Usp19Q3UJD6 1360 aa16.3■□□□□ 0.2
Clcn3-204ENSMUST00000110301 Arhgap23Q69ZH9 1483 aa16.3■□□□□ 0.2
Clcn3-204ENSMUST00000110301 Sugp2Q8CH09 1067 aa16.3■□□□□ 0.2
Clcn3-204ENSMUST00000110301 Pcmtd1P59913 357 aa16.29■□□□□ 0.2
Clcn3-204ENSMUST00000110301 Map3k2Q61083 619 aa16.29■□□□□ 0.2
Clcn3-204ENSMUST00000110301 Filip1lQ6P6L0 1131 aa16.29■□□□□ 0.2
Clcn3-204ENSMUST00000110301 ThemisQ8BGW0 636 aa16.29■□□□□ 0.2
Clcn3-204ENSMUST00000110301 Elp1Q7TT37 1333 aaKnown RBP16.29■□□□□ 0.2
Clcn3-204ENSMUST00000110301 Fkbp5Q64378 456 aa16.29■□□□□ 0.2
Clcn3-204ENSMUST00000110301 Ahdc1Q6PAL7 1594 aaKnown RBP16.29■□□□□ 0.2
Clcn3-204ENSMUST00000110301 CrklP47941 303 aa16.29■□□□□ 0.2
Clcn3-204ENSMUST00000110301 Strn4P58404 760 aa16.29■□□□□ 0.2
Clcn3-204ENSMUST00000110301 RereQ80TZ9 1558 aa16.28■□□□□ 0.2
Clcn3-204ENSMUST00000110301 Scaf1Q5U4C3 1256 aaKnown RBP16.28■□□□□ 0.2
Clcn3-204ENSMUST00000110301 AglF8VPN4 1532 aa16.28■□□□□ 0.2
Clcn3-204ENSMUST00000110301 Tfip11Q9ERA6 838 aaKnown RBP16.28■□□□□ 0.2
Clcn3-204ENSMUST00000110301 Plxnc1Q9QZC2 1574 aa16.28■□□□□ 0.2
Clcn3-204ENSMUST00000110301 Dmrt2Q8BG36 561 aa16.27■□□□□ 0.2
Clcn3-204ENSMUST00000110301 Ttc21aQ8C0S4 1314 aa16.27■□□□□ 0.2
Clcn3-204ENSMUST00000110301 Prex1Q69ZK0 1650 aa16.27■□□□□ 0.19
Clcn3-204ENSMUST00000110301 Adgrl1Q80TR1 1466 aa16.27■□□□□ 0.19
Clcn3-204ENSMUST00000110301 Kiaa0556Q8C753 1610 aa16.27■□□□□ 0.19
Clcn3-204ENSMUST00000110301 Mre11Q61216 706 aa16.26■□□□□ 0.19
Clcn3-204ENSMUST00000110301 Sytl4Q9R0Q1 673 aa16.26■□□□□ 0.19
Clcn3-204ENSMUST00000110301 Bicdl1A0JNT9 577 aa16.26■□□□□ 0.19
Clcn3-204ENSMUST00000110301 Exoc5Q3TPX4 708 aa16.26■□□□□ 0.19
Clcn3-204ENSMUST00000110301 Rsph3aQ3UFY4 516 aa16.26■□□□□ 0.19
Clcn3-204ENSMUST00000110301 Irf9Q61179 399 aa16.26■□□□□ 0.19
Clcn3-204ENSMUST00000110301 CrebrfQ8CDG5 640 aaKnown RBP16.26■□□□□ 0.19
Clcn3-204ENSMUST00000110301 GckrQ91X44 587 aa16.26■□□□□ 0.19
Clcn3-204ENSMUST00000110301 Cdc42bpgQ80UW5 1551 aa16.26■□□□□ 0.19
Clcn3-204ENSMUST00000110301 Smarce1O54941 411 aaKnown RBP16.26■□□□□ 0.19
Clcn3-204ENSMUST00000110301 Kcna6Q61923 529 aa16.26■□□□□ 0.19
Clcn3-204ENSMUST00000110301 Ddx11Q6AXC6 880 aa16.26■□□□□ 0.19
Clcn3-204ENSMUST00000110301 Ptpdc1Q6NZK8 747 aa16.26■□□□□ 0.19
Clcn3-204ENSMUST00000110301 AU019823E9PUQ3 292 aa16.25■□□□□ 0.19
Clcn3-204ENSMUST00000110301 GpkowQ56A08 488 aa16.25■□□□□ 0.19
Clcn3-204ENSMUST00000110301 Wwc1Q5SXA9 1104 aa16.25■□□□□ 0.19
Clcn3-204ENSMUST00000110301 Soga3Q6NZL0 945 aa16.25■□□□□ 0.19
Clcn3-204ENSMUST00000110301 FanclQ9CR14 375 aa16.25■□□□□ 0.19
Clcn3-204ENSMUST00000110301 Casq1O09165 405 aa16.25■□□□□ 0.19
Clcn3-204ENSMUST00000110301 Atp6v1dP57746 247 aa16.25■□□□□ 0.19
Clcn3-204ENSMUST00000110301 Znf335A2A5K6 1337 aa16.25■□□□□ 0.19
Clcn3-204ENSMUST00000110301 Dnajc5P60904 198 aa16.24■□□□□ 0.19
Clcn3-204ENSMUST00000110301 Q4VA45 678 aa16.24■□□□□ 0.19
Clcn3-204ENSMUST00000110301 Fam13aQ8BGI4 693 aa16.24■□□□□ 0.19
Clcn3-204ENSMUST00000110301 Jakmip1Q8BVL9 626 aa16.24■□□□□ 0.19
Clcn3-204ENSMUST00000110301 Bcar3Q9QZK2 820 aa16.24■□□□□ 0.19
Clcn3-204ENSMUST00000110301 Iqgap3F8VQ29 1632 aa16.24■□□□□ 0.19
Clcn3-204ENSMUST00000110301 Eif3aP23116 1344 aaKnown RBP16.24■□□□□ 0.19
Clcn3-204ENSMUST00000110301 Ccnl1Q52KE7 532 aaKnown RBP16.24■□□□□ 0.19
Clcn3-204ENSMUST00000110301 Nol12Q8BG17 217 aa16.24■□□□□ 0.19
Clcn3-204ENSMUST00000110301 Slc39a6Q8C145 765 aa16.24■□□□□ 0.19
Clcn3-204ENSMUST00000110301 Echdc1Q9D9V3 322 aa16.24■□□□□ 0.19
Clcn3-204ENSMUST00000110301 Kdm5aQ3UXZ9 1690 aa16.24■□□□□ 0.19
Clcn3-204ENSMUST00000110301 FancaQ9JL70 1439 aa16.23■□□□□ 0.19
Clcn3-204ENSMUST00000110301 Jarid2Q62315 1234 aa16.23■□□□□ 0.19
Clcn3-204ENSMUST00000110301 Rlbp1Q9Z275 317 aa16.23■□□□□ 0.19
Clcn3-204ENSMUST00000110301 Rbm5Q91YE7 815 aaKnown RBP16.23■□□□□ 0.19
Clcn3-204ENSMUST00000110301 Med14A2ABV5 1459 aaKnown RBP16.23■□□□□ 0.19
Clcn3-204ENSMUST00000110301 Rapgef4Q9EQZ6 1011 aa16.23■□□□□ 0.19
Clcn3-204ENSMUST00000110301 Ccdc9Q8VC31 543 aaKnown RBP16.22■□□□□ 0.19
Clcn3-204ENSMUST00000110301 Slc26a8Q8R0C3 999 aa16.22■□□□□ 0.19
Clcn3-204ENSMUST00000110301 Trim27Q62158 513 aa16.22■□□□□ 0.19
Clcn3-204ENSMUST00000110301 Cep152A2AUM9 1736 aaKnown RBP16.22■□□□□ 0.19
Clcn3-204ENSMUST00000110301 Nsd3Q6P2L6 1439 aa16.21■□□□□ 0.19
Clcn3-204ENSMUST00000110301 Efcab2Q9CQ46 164 aa16.21■□□□□ 0.19
Clcn3-204ENSMUST00000110301 PtmsQ9D0J8 101 aaKnown RBP16.21■□□□□ 0.19
Clcn3-204ENSMUST00000110301 St18Q80TY4 1045 aa16.21■□□□□ 0.19
Clcn3-204ENSMUST00000110301 Rrs1Q9CYH6 365 aaKnown RBP16.21■□□□□ 0.19
Clcn3-204ENSMUST00000110301 Trim34aQ99PP6 485 aa16.21■□□□□ 0.19
Clcn3-204ENSMUST00000110301 Xrn1P97789 1719 aaKnown RBP16.2■□□□□ 0.18
Clcn3-204ENSMUST00000110301 Anapc15P60007 132 aa16.2■□□□□ 0.18
Clcn3-204ENSMUST00000110301 Prkab2Q6PAM0 271 aa16.2■□□□□ 0.18
Clcn3-204ENSMUST00000110301 IghaA0A0A6YXW6 389 aa16.2■□□□□ 0.18
Clcn3-204ENSMUST00000110301 Igflr1Q3U4N7 345 aa16.2■□□□□ 0.18
Clcn3-204ENSMUST00000110301 Iqgap1Q9JKF1 1657 aaKnown RBP16.2■□□□□ 0.18
Retrieved 100 of 22,080 RNA–protein pairs in 16.8 ms