RNA–Protein interactions for RNA: ENSMUST00000076372.4

Sf3b4-201, Transcript of Splicing factor 3B subunit 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sf3b4, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b4-201ENSMUST00000076372 Arfgef2A2A5R2 1792 aa19.97■□□□□ 0.79
Sf3b4-201ENSMUST00000076372 Nup153E9Q3G8 1462 aaKnown RBP19.96■□□□□ 0.79
Sf3b4-201ENSMUST00000076372 Ggt6Q6PDE7 497 aa19.95■□□□□ 0.78
Sf3b4-201ENSMUST00000076372 Pibf1E9Q6K3 756 aa19.94■□□□□ 0.78
Sf3b4-201ENSMUST00000076372 Ccdc60Q8C4J0 545 aa19.94■□□□□ 0.78
Sf3b4-201ENSMUST00000076372 Aox2Q5SGK3 1345 aa19.94■□□□□ 0.78
Sf3b4-201ENSMUST00000076372 1700019A02RikA0A087WPV9 146 aa19.94■□□□□ 0.78
Sf3b4-201ENSMUST00000076372 Gm6268A2A3U9 297 aa19.94■□□□□ 0.78
Sf3b4-201ENSMUST00000076372 Rangap1P46061 589 aaKnown RBP19.94■□□□□ 0.78
Sf3b4-201ENSMUST00000076372 Cc2d1aQ8K1A6 943 aa19.94■□□□□ 0.78
Sf3b4-201ENSMUST00000076372 Sos1Q62245 1319 aa19.94■□□□□ 0.78
Sf3b4-201ENSMUST00000076372 Nkx2-3P97334 362 aa19.92■□□□□ 0.78
Sf3b4-201ENSMUST00000076372 FocadA2AKG8 1798 aa19.92■□□□□ 0.78
Sf3b4-201ENSMUST00000076372 Vamp4O70480 141 aa19.92■□□□□ 0.78
Sf3b4-201ENSMUST00000076372 4930572O03RikQ8C5Y0 211 aa19.9■□□□□ 0.78
Sf3b4-201ENSMUST00000076372 Pdzd9Q9D9M4 266 aa19.9■□□□□ 0.78
Sf3b4-201ENSMUST00000076372 SafbD3YXK2 937 aaKnown RBP19.88■□□□□ 0.77
Sf3b4-201ENSMUST00000076372 Ccdc171E9Q1U1 1324 aa19.88■□□□□ 0.77
Sf3b4-201ENSMUST00000076372 CenpbP27790 599 aa19.88■□□□□ 0.77
Sf3b4-201ENSMUST00000076372 Kcnh8P59111 1102 aa19.88■□□□□ 0.77
Sf3b4-201ENSMUST00000076372 G3bp1P97855 465 aaKnown RBP19.88■□□□□ 0.77
Sf3b4-201ENSMUST00000076372 Phkg2Q9DB30 406 aa19.87■□□□□ 0.77
Sf3b4-201ENSMUST00000076372 Pank1Q8K4K6 548 aa19.86■□□□□ 0.77
Sf3b4-201ENSMUST00000076372 Speer4bQ9D9F7 267 aa19.86■□□□□ 0.77
Sf3b4-201ENSMUST00000076372 Psrc1Q9D0P7 329 aa19.86■□□□□ 0.77
Sf3b4-201ENSMUST00000076372 Foxp4Q9DBY0 795 aaKnown RBP19.86■□□□□ 0.77
Sf3b4-201ENSMUST00000076372 Zeb2Q9R0G7 1215 aa19.86■□□□□ 0.77
Sf3b4-201ENSMUST00000076372 Abcc12Q80WJ6 1366 aa19.86■□□□□ 0.77
Sf3b4-201ENSMUST00000076372 Tns2Q8CGB6 1400 aa19.85■□□□□ 0.77
Sf3b4-201ENSMUST00000076372 Nectin2P32507 530 aa19.85■□□□□ 0.77
Sf3b4-201ENSMUST00000076372 Larp1Q6ZQ58 1072 aaKnown RBP19.85■□□□□ 0.77
Sf3b4-201ENSMUST00000076372 Plekhm2Q80TQ5 1018 aa19.84■□□□□ 0.77
Sf3b4-201ENSMUST00000076372 Ccdc155Q80VJ8 648 aa19.84■□□□□ 0.77
Sf3b4-201ENSMUST00000076372 Chmp7Q8R1T1 451 aa19.84■□□□□ 0.77
Sf3b4-201ENSMUST00000076372 KarsQ99MN1 595 aaKnown RBP19.84■□□□□ 0.77
Sf3b4-201ENSMUST00000076372 Irx6Q9ER75 438 aa19.84■□□□□ 0.77
Sf3b4-201ENSMUST00000076372 Gm21680A0A0G2JGR8 267 aa19.84■□□□□ 0.77
Sf3b4-201ENSMUST00000076372 Tmco5bQ80X59 307 aa19.84■□□□□ 0.77
Sf3b4-201ENSMUST00000076372 Nyap1Q6PFX7 833 aa19.83■□□□□ 0.77
Sf3b4-201ENSMUST00000076372 Sema6bO54951 886 aa19.82■□□□□ 0.76
Sf3b4-201ENSMUST00000076372 Cyp2d12Q8BVD2 504 aa19.82■□□□□ 0.76
Sf3b4-201ENSMUST00000076372 Eno4Q8C042 619 aa19.82■□□□□ 0.76
Sf3b4-201ENSMUST00000076372 Ccdc129Q14B48 1034 aa19.82■□□□□ 0.76
Sf3b4-201ENSMUST00000076372 Trim58Q5NCC9 485 aa19.82■□□□□ 0.76
Sf3b4-201ENSMUST00000076372 Btbd11Q6GQW0 1109 aa19.82■□□□□ 0.76
Sf3b4-201ENSMUST00000076372 Asic4Q7TNS7 539 aa19.82■□□□□ 0.76
Sf3b4-201ENSMUST00000076372 Ppp1r3fQ9JIG4 799 aa19.82■□□□□ 0.76
Sf3b4-201ENSMUST00000076372 Tnks1bp1P58871 1720 aa19.81■□□□□ 0.76
Sf3b4-201ENSMUST00000076372 Adgrb1Q3UHD1 1582 aa19.81■□□□□ 0.76
Sf3b4-201ENSMUST00000076372 Tnnt1O88346 262 aa19.8■□□□□ 0.76
Sf3b4-201ENSMUST00000076372 NeflP08551 543 aa19.8■□□□□ 0.76
Sf3b4-201ENSMUST00000076372 Eif3bQ8JZQ9 803 aaKnown RBP19.8■□□□□ 0.76
Sf3b4-201ENSMUST00000076372 Q3TQI7 289 aaKnown RBP19.8■□□□□ 0.76
Sf3b4-201ENSMUST00000076372 Znf330Q922H9 316 aa19.8■□□□□ 0.76
Sf3b4-201ENSMUST00000076372 Igsf1Q7TQA1 1317 aa19.8■□□□□ 0.76
Sf3b4-201ENSMUST00000076372 Gm21663A0A0G2JE01 267 aa19.79■□□□□ 0.76
Sf3b4-201ENSMUST00000076372 Gm7361D3Z6R1 267 aa19.79■□□□□ 0.76
Sf3b4-201ENSMUST00000076372 5031410I06RikE9Q4E0 267 aa19.79■□□□□ 0.76
Sf3b4-201ENSMUST00000076372 Gm1979E9QAN3 267 aa19.79■□□□□ 0.76
Sf3b4-201ENSMUST00000076372 Gm5862K7N5V5 267 aa19.79■□□□□ 0.76
Sf3b4-201ENSMUST00000076372 Gm10220K7N660 267 aa19.79■□□□□ 0.76
Sf3b4-201ENSMUST00000076372 Nsd3Q6P2L6 1439 aa19.79■□□□□ 0.76
Sf3b4-201ENSMUST00000076372 Chpf2Q3UU43 768 aa19.78■□□□□ 0.76
Sf3b4-201ENSMUST00000076372 Tspyl2Q7TQI8 677 aa19.78■□□□□ 0.76
Sf3b4-201ENSMUST00000076372 MypopQ8R4U1 393 aa19.78■□□□□ 0.76
Sf3b4-201ENSMUST00000076372 Eif4a1P60843 406 aaKnown RBP19.77■□□□□ 0.76
Sf3b4-201ENSMUST00000076372 Slc5a1Q8C3K6 665 aa19.77■□□□□ 0.76
Sf3b4-201ENSMUST00000076372 Ssfa2Q922B9 1252 aa19.77■□□□□ 0.76
Sf3b4-201ENSMUST00000076372 Chl1P70232 1209 aa19.76■□□□□ 0.75
Sf3b4-201ENSMUST00000076372 Aplp1Q03157 653 aa19.76■□□□□ 0.75
Sf3b4-201ENSMUST00000076372 Msh6P54276 1358 aaKnown RBP19.76■□□□□ 0.75
Sf3b4-201ENSMUST00000076372 Cntnap1O54991 1385 aa19.76■□□□□ 0.75
Sf3b4-201ENSMUST00000076372 Q3UPC7 1272 aa19.76■□□□□ 0.75
Sf3b4-201ENSMUST00000076372 Atf5O70191 283 aa19.75■□□□□ 0.75
Sf3b4-201ENSMUST00000076372 Nutm1Q8BHP2 1126 aa19.75■□□□□ 0.75
Sf3b4-201ENSMUST00000076372 Sf3b2Q3UJB0 878 aaKnown RBP19.74■□□□□ 0.75
Sf3b4-201ENSMUST00000076372 Emilin2Q8K482 1074 aa19.74■□□□□ 0.75
Sf3b4-201ENSMUST00000076372 Cavin2Q63918 418 aaKnown RBP19.74■□□□□ 0.75
Sf3b4-201ENSMUST00000076372 Mbd3Q9Z2D8 285 aaKnown RBP19.74■□□□□ 0.75
Sf3b4-201ENSMUST00000076372 Akap11E9Q777 1895 aa19.74■□□□□ 0.75
Sf3b4-201ENSMUST00000076372 Kcnh4A2A5F7 1018 aa19.73■□□□□ 0.75
Sf3b4-201ENSMUST00000076372 Myt1Q8CFC2 1127 aa19.73■□□□□ 0.75
Sf3b4-201ENSMUST00000076372 Sik1Q60670 779 aa19.72■□□□□ 0.75
Sf3b4-201ENSMUST00000076372 Pm20d1Q8C165 503 aa19.72■□□□□ 0.75
Sf3b4-201ENSMUST00000076372 Lrp6O88572 1613 aa19.72■□□□□ 0.75
Sf3b4-201ENSMUST00000076372 Myo5bP21271 1818 aa19.72■□□□□ 0.75
Sf3b4-201ENSMUST00000076372 Col1a2Q01149 1372 aa19.72■□□□□ 0.75
Sf3b4-201ENSMUST00000076372 MarsQ68FL6 902 aaKnown RBP19.72■□□□□ 0.75
Sf3b4-201ENSMUST00000076372 Maco1Q7TQE6 664 aaKnown RBP19.72■□□□□ 0.75
Sf3b4-201ENSMUST00000076372 Elp1Q7TT37 1333 aaKnown RBP19.71■□□□□ 0.75
Sf3b4-201ENSMUST00000076372 Shank2Q80Z38 1476 aa19.71■□□□□ 0.75
Sf3b4-201ENSMUST00000076372 Aifm3Q3TY86 605 aa19.71■□□□□ 0.75
Sf3b4-201ENSMUST00000076372 Ints5Q8CHT3 1018 aa19.71■□□□□ 0.75
Sf3b4-201ENSMUST00000076372 Aldh1l1Q8R0Y6 902 aa19.71■□□□□ 0.75
Sf3b4-201ENSMUST00000076372 Fkbp4P30416 458 aa19.7■□□□□ 0.74
Sf3b4-201ENSMUST00000076372 Prkrip1Q9CWV6 186 aaKnown RBP19.7■□□□□ 0.74
Sf3b4-201ENSMUST00000076372 Gm38655A0A286YDK6 273 aa19.7■□□□□ 0.74
Sf3b4-201ENSMUST00000076372 Ankrd23Q812A3 306 aa19.7■□□□□ 0.74
Sf3b4-201ENSMUST00000076372 Sv2bQ8BG39 683 aa19.7■□□□□ 0.74
Sf3b4-201ENSMUST00000076372 Znf521Q6KAS7 1311 aa19.69■□□□□ 0.74
Retrieved 100 of 22,080 RNA–protein pairs in 14.1 ms