RNA–Protein interactions for RNA: ENSMUST00000064098.13

Ldb3-204, Transcript of LIM domain-binding protein 3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ldb3, Length 2,299 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb3-204ENSMUST00000064098 Shank2Q80Z38 1476 aa15.54■□□□□ 0.08
Ldb3-204ENSMUST00000064098 Gas2l2Q5SSG4 860 aa15.54■□□□□ 0.08
Ldb3-204ENSMUST00000064098 4930572O03RikQ8C5Y0 211 aa15.54■□□□□ 0.08
Ldb3-204ENSMUST00000064098 Pm20d1Q8C165 503 aa15.53■□□□□ 0.08
Ldb3-204ENSMUST00000064098 Akap11E9Q777 1895 aa15.53■□□□□ 0.08
Ldb3-204ENSMUST00000064098 Trpm3Q5F4S9 1721 aa15.53■□□□□ 0.08
Ldb3-204ENSMUST00000064098 Nup153E9Q3G8 1462 aaKnown RBP15.52■□□□□ 0.08
Ldb3-204ENSMUST00000064098 Aox2Q5SGK3 1345 aa15.52■□□□□ 0.08
Ldb3-204ENSMUST00000064098 Kank1E9Q238 1360 aa15.52■□□□□ 0.07
Ldb3-204ENSMUST00000064098 Speer4bQ9D9F7 267 aa15.5■□□□□ 0.07
Ldb3-204ENSMUST00000064098 Adgrb1Q3UHD1 1582 aa15.5■□□□□ 0.07
Ldb3-204ENSMUST00000064098 Ksr2Q3UVC0 959 aa15.5■□□□□ 0.07
Ldb3-204ENSMUST00000064098 Pdzd9Q9D9M4 266 aa15.5■□□□□ 0.07
Ldb3-204ENSMUST00000064098 Gm21680A0A0G2JGR8 267 aa15.49■□□□□ 0.07
Ldb3-204ENSMUST00000064098 Nkx2-3P97334 362 aa15.49■□□□□ 0.07
Ldb3-204ENSMUST00000064098 Phkg2Q9DB30 406 aa15.49■□□□□ 0.07
Ldb3-204ENSMUST00000064098 Senp3Q9EP97 568 aaKnown RBP15.49■□□□□ 0.07
Ldb3-204ENSMUST00000064098 Tns2Q8CGB6 1400 aa15.49■□□□□ 0.07
Ldb3-204ENSMUST00000064098 Prim1P20664 417 aa15.48■□□□□ 0.07
Ldb3-204ENSMUST00000064098 Sgsm1Q8BPQ7 1093 aa15.48■□□□□ 0.07
Ldb3-204ENSMUST00000064098 Fer1l6E0CZ42 1862 aa15.48■□□□□ 0.07
Ldb3-204ENSMUST00000064098 Kcnh4A2A5F7 1018 aa15.48■□□□□ 0.07
Ldb3-204ENSMUST00000064098 Ggnbp2Q5SV77 696 aa15.48■□□□□ 0.07
Ldb3-204ENSMUST00000064098 Larp1Q6ZQ58 1072 aaKnown RBP15.48■□□□□ 0.07
Ldb3-204ENSMUST00000064098 Klhdc4Q921I2 584 aa15.48■□□□□ 0.07
Ldb3-204ENSMUST00000064098 Ttc21aQ8C0S4 1314 aa15.48■□□□□ 0.07
Ldb3-204ENSMUST00000064098 Ankrd50F7BE84 1390 aa15.48■□□□□ 0.07
Ldb3-204ENSMUST00000064098 Tnks1bp1P58871 1720 aa15.48■□□□□ 0.07
Ldb3-204ENSMUST00000064098 Gnai1B2RSH2 354 aa15.47■□□□□ 0.07
Ldb3-204ENSMUST00000064098 Dmrt2Q8BG36 561 aa15.47■□□□□ 0.07
Ldb3-204ENSMUST00000064098 Gnai3Q9DC51 354 aa15.47■□□□□ 0.07
Ldb3-204ENSMUST00000064098 Sos1Q62245 1319 aa15.47■□□□□ 0.07
Ldb3-204ENSMUST00000064098 Rbm25B2RY56 838 aaKnown RBP15.47■□□□□ 0.07
Ldb3-204ENSMUST00000064098 Cdc37l1Q9CZP7 335 aa15.47■□□□□ 0.07
Ldb3-204ENSMUST00000064098 Ankrd23Q812A3 306 aa15.46■□□□□ 0.07
Ldb3-204ENSMUST00000064098 Eif3bQ8JZQ9 803 aaKnown RBP15.46■□□□□ 0.07
Ldb3-204ENSMUST00000064098 Ginm1Q91WR6 327 aa15.46■□□□□ 0.07
Ldb3-204ENSMUST00000064098 Sik1Q60670 779 aa15.46■□□□□ 0.06
Ldb3-204ENSMUST00000064098 Asic4Q7TNS7 539 aa15.45■□□□□ 0.06
Ldb3-204ENSMUST00000064098 Chmp7Q8R1T1 451 aa15.45■□□□□ 0.06
Ldb3-204ENSMUST00000064098 Tnrc6cQ3UHC0 1690 aaKnown RBP15.45■□□□□ 0.06
Ldb3-204ENSMUST00000064098 Exoc5Q3TPX4 708 aa15.45■□□□□ 0.06
Ldb3-204ENSMUST00000064098 U2surpQ6NV83 1029 aaKnown RBP15.45■□□□□ 0.06
Ldb3-204ENSMUST00000064098 Abcc12Q80WJ6 1366 aa15.44■□□□□ 0.06
Ldb3-204ENSMUST00000064098 Cacna1sQ02789 1880 aa15.44■□□□□ 0.06
Ldb3-204ENSMUST00000064098 Ssfa2Q922B9 1252 aa15.44■□□□□ 0.06
Ldb3-204ENSMUST00000064098 Usp16Q99LG0 825 aa15.44■□□□□ 0.06
Ldb3-204ENSMUST00000064098 Vps33bP59016 617 aa15.43■□□□□ 0.06
Ldb3-204ENSMUST00000064098 Mst1rQ62190 1378 aa15.43■□□□□ 0.06
Ldb3-204ENSMUST00000064098 Elp1Q7TT37 1333 aaKnown RBP15.43■□□□□ 0.06
Ldb3-204ENSMUST00000064098 CastP51125 788 aa15.43■□□□□ 0.06
Ldb3-204ENSMUST00000064098 Kat6bQ8BRB7 1872 aa15.43■□□□□ 0.06
Ldb3-204ENSMUST00000064098 Gm21663A0A0G2JE01 267 aa15.42■□□□□ 0.06
Ldb3-204ENSMUST00000064098 Gm7361D3Z6R1 267 aa15.42■□□□□ 0.06
Ldb3-204ENSMUST00000064098 5031410I06RikE9Q4E0 267 aa15.42■□□□□ 0.06
Ldb3-204ENSMUST00000064098 Gm1979E9QAN3 267 aa15.42■□□□□ 0.06
Ldb3-204ENSMUST00000064098 Gm5862K7N5V5 267 aa15.42■□□□□ 0.06
Ldb3-204ENSMUST00000064098 Gm10220K7N660 267 aa15.42■□□□□ 0.06
Ldb3-204ENSMUST00000064098 Ccdc155Q80VJ8 648 aa15.42■□□□□ 0.06
Ldb3-204ENSMUST00000064098 Slc5a1Q8C3K6 665 aa15.42■□□□□ 0.06
Ldb3-204ENSMUST00000064098 Trim26Q99PN3 545 aa15.42■□□□□ 0.06
Ldb3-204ENSMUST00000064098 NudcO35685 332 aaKnown RBP15.42■□□□□ 0.06
Ldb3-204ENSMUST00000064098 Ddb1Q3U1J4 1140 aaKnown RBP15.42■□□□□ 0.06
Ldb3-204ENSMUST00000064098 Ccar1Q8CH18 1146 aaKnown RBP15.42■□□□□ 0.06
Ldb3-204ENSMUST00000064098 Plekhh1Q80TI1 1356 aa15.41■□□□□ 0.06
Ldb3-204ENSMUST00000064098 Mast2Q60592 1734 aa15.41■□□□□ 0.06
Ldb3-204ENSMUST00000064098 Pibf1E9Q6K3 756 aa15.41■□□□□ 0.06
Ldb3-204ENSMUST00000064098 Foxp4Q9DBY0 795 aaKnown RBP15.41■□□□□ 0.06
Ldb3-204ENSMUST00000064098 Ltbp1Q8CG19 1712 aa15.4■□□□□ 0.06
Ldb3-204ENSMUST00000064098 1700019A02RikA0A087WPV9 146 aa15.4■□□□□ 0.06
Ldb3-204ENSMUST00000064098 Btbd11Q6GQW0 1109 aa15.4■□□□□ 0.06
Ldb3-204ENSMUST00000064098 Ttc41Q692V3 1318 aa15.39■□□□□ 0.05
Ldb3-204ENSMUST00000064098 Upf2A2AT37 1269 aaKnown RBP15.39■□□□□ 0.05
Ldb3-204ENSMUST00000064098 Kcnh8P59111 1102 aa15.39■□□□□ 0.05
Ldb3-204ENSMUST00000064098 Polr3glQ8R0C0 218 aa15.38■□□□□ 0.05
Ldb3-204ENSMUST00000064098 Vamp4O70480 141 aa15.38■□□□□ 0.05
Ldb3-204ENSMUST00000064098 Ints5Q8CHT3 1018 aa15.38■□□□□ 0.05
Ldb3-204ENSMUST00000064098 Nwd2Q6P5U7 1742 aa15.37■□□□□ 0.05
Ldb3-204ENSMUST00000064098 Amer1Q7TS75 1132 aa15.37■□□□□ 0.05
Ldb3-204ENSMUST00000064098 Fbln2P37889 1221 aa15.36■□□□□ 0.05
Ldb3-204ENSMUST00000064098 Cyp2d12Q8BVD2 504 aa15.36■□□□□ 0.05
Ldb3-204ENSMUST00000064098 Ccdc60Q8C4J0 545 aa15.36■□□□□ 0.05
Ldb3-204ENSMUST00000064098 ApobrQ8VBT6 942 aa15.36■□□□□ 0.05
Ldb3-204ENSMUST00000064098 Gm6268A2A3U9 297 aa15.35■□□□□ 0.05
Ldb3-204ENSMUST00000064098 Ccnl1Q52KE7 532 aaKnown RBP15.35■□□□□ 0.05
Ldb3-204ENSMUST00000064098 Irx6Q9ER75 438 aa15.35■□□□□ 0.05
Ldb3-204ENSMUST00000064098 Myo5bP21271 1818 aa15.35■□□□□ 0.05
Ldb3-204ENSMUST00000064098 Igsf1Q7TQA1 1317 aa15.35■□□□□ 0.05
Ldb3-204ENSMUST00000064098 Eif4a1P60843 406 aaKnown RBP15.34■□□□□ 0.05
Ldb3-204ENSMUST00000064098 Rwdd1Q9CQK7 243 aa15.33■□□□□ 0.05
Ldb3-204ENSMUST00000064098 4930523C07RikE9Q2T4 99 aa15.33■□□□□ 0.04
Ldb3-204ENSMUST00000064098 Q3TQI7 289 aaKnown RBP15.33■□□□□ 0.04
Ldb3-204ENSMUST00000064098 Ccdc171E9Q1U1 1324 aa15.33■□□□□ 0.04
Ldb3-204ENSMUST00000064098 Taok3Q8BYC6 898 aa15.32■□□□□ 0.04
Ldb3-204ENSMUST00000064098 Apbb1Q9QXJ1 710 aa15.32■□□□□ 0.04
Ldb3-204ENSMUST00000064098 Crb1Q8VHS2 1405 aa15.32■□□□□ 0.04
Ldb3-204ENSMUST00000064098 Ubr2Q6WKZ8 1755 aa15.32■□□□□ 0.04
Ldb3-204ENSMUST00000064098 Atf5O70191 283 aa15.32■□□□□ 0.04
Ldb3-204ENSMUST00000064098 Tnnt1O88346 262 aa15.32■□□□□ 0.04
Ldb3-204ENSMUST00000064098 Chpf2Q3UU43 768 aa15.32■□□□□ 0.04
Retrieved 100 of 22,080 RNA–protein pairs in 14.2 ms