RNA–Protein interactions for RNA: ENSMUST00000055758.15

Ubr3-201, Transcript of E3 ubiquitin-protein ligase UBR3, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ubr3, Length 8,072 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr3-201ENSMUST00000055758 Map3k13Q1HKZ5 959 aa18.24■□□□□ 0.51
Ubr3-201ENSMUST00000055758 Sass6Q80UK7 654 aa18.24■□□□□ 0.51
Ubr3-201ENSMUST00000055758 Ppp1r9bQ6R891 817 aaKnown RBP18.24■□□□□ 0.51
Ubr3-201ENSMUST00000055758 Gnl3lQ6PGG6 577 aaKnown RBP18.23■□□□□ 0.51
Ubr3-201ENSMUST00000055758 Fam13aQ8BGI4 693 aa18.23■□□□□ 0.51
Ubr3-201ENSMUST00000055758 Lmbr1Q9JIT0 490 aa18.23■□□□□ 0.51
Ubr3-201ENSMUST00000055758 Cdkl5Q3UTQ8 938 aa18.23■□□□□ 0.51
Ubr3-201ENSMUST00000055758 Ppip5k2Q6ZQB6 1129 aa18.23■□□□□ 0.51
Ubr3-201ENSMUST00000055758 Ccdc158Q8CDI6 1109 aa18.23■□□□□ 0.51
Ubr3-201ENSMUST00000055758 Adcy5P84309 1262 aa18.22■□□□□ 0.51
Ubr3-201ENSMUST00000055758 Fam177a1Q8BR63 207 aa18.22■□□□□ 0.51
Ubr3-201ENSMUST00000055758 Tmx1Q8VBT0 278 aa18.22■□□□□ 0.51
Ubr3-201ENSMUST00000055758 Cabp2Q9JLK4 216 aa18.22■□□□□ 0.51
Ubr3-201ENSMUST00000055758 Cc2d1bQ8BRN9 848 aa18.22■□□□□ 0.51
Ubr3-201ENSMUST00000055758 ErbinQ80TH2 1402 aa18.22■□□□□ 0.51
Ubr3-201ENSMUST00000055758 Rsph4aQ8BYM7 716 aa18.21■□□□□ 0.51
Ubr3-201ENSMUST00000055758 Usp35M0QWN7 1009 aa18.21■□□□□ 0.51
Ubr3-201ENSMUST00000055758 TefQ9JLC6 301 aa18.21■□□□□ 0.51
Ubr3-201ENSMUST00000055758 Washc2Q6PGL7 1334 aa18.21■□□□□ 0.51
Ubr3-201ENSMUST00000055758 Cavin1O54724 392 aa18.21■□□□□ 0.51
Ubr3-201ENSMUST00000055758 Zpr1Q62384 459 aa18.21■□□□□ 0.51
Ubr3-201ENSMUST00000055758 Irgm2A0A140LIF8 407 aa18.21■□□□□ 0.51
Ubr3-201ENSMUST00000055758 Prl7d1P04769 244 aa18.21■□□□□ 0.51
Ubr3-201ENSMUST00000055758 Rab3gap2Q8BMG7 1366 aa18.21■□□□□ 0.51
Ubr3-201ENSMUST00000055758 Cux2P70298 1426 aa18.21■□□□□ 0.51
Ubr3-201ENSMUST00000055758 Smg7Q5RJH6 1138 aaKnown RBP18.21■□□□□ 0.51
Ubr3-201ENSMUST00000055758 Ankrd24Q80VM7 985 aa18.21■□□□□ 0.51
Ubr3-201ENSMUST00000055758 Ddx58Q6Q899 926 aa18.21■□□□□ 0.5
Ubr3-201ENSMUST00000055758 Ctnnbl1Q9CWL8 563 aaKnown RBP18.21■□□□□ 0.5
Ubr3-201ENSMUST00000055758 AdnpQ9Z103 1108 aaKnown RBP18.21■□□□□ 0.5
Ubr3-201ENSMUST00000055758 ZwintQ9CQU5 252 aa18.2■□□□□ 0.5
Ubr3-201ENSMUST00000055758 Gse1Q3U3C9 1213 aa18.2■□□□□ 0.5
Ubr3-201ENSMUST00000055758 Top1mtQ8R4U6 593 aa18.2■□□□□ 0.5
Ubr3-201ENSMUST00000055758 Knop1Q9Z2Q2 478 aaKnown RBP18.2■□□□□ 0.5
Ubr3-201ENSMUST00000055758 Sdccag8Q80UF4 717 aa18.2■□□□□ 0.5
Ubr3-201ENSMUST00000055758 Gbp2Q9Z0E6 589 aa18.2■□□□□ 0.5
Ubr3-201ENSMUST00000055758 Q4VA45 678 aa18.2■□□□□ 0.5
Ubr3-201ENSMUST00000055758 Shtn1Q8K2Q9 631 aa18.2■□□□□ 0.5
Ubr3-201ENSMUST00000055758 Zfp853A0A1D5RM95 733 aa18.19■□□□□ 0.5
Ubr3-201ENSMUST00000055758 Galntl5Q9D4M9 431 aa18.19■□□□□ 0.5
Ubr3-201ENSMUST00000055758 Gbp7Q91Z40 638 aa18.19■□□□□ 0.5
Ubr3-201ENSMUST00000055758 LarsQ8BMJ2 1178 aa18.19■□□□□ 0.5
Ubr3-201ENSMUST00000055758 Cep131Q62036 1060 aa18.19■□□□□ 0.5
Ubr3-201ENSMUST00000055758 Cep135Q6P5D4 1140 aa18.19■□□□□ 0.5
Ubr3-201ENSMUST00000055758 Snw1Q9CSN1 536 aaKnown RBP18.18■□□□□ 0.5
Ubr3-201ENSMUST00000055758 Stxbp4Q9WV89 557 aa18.18■□□□□ 0.5
Ubr3-201ENSMUST00000055758 ImpactO55091 318 aa18.18■□□□□ 0.5
Ubr3-201ENSMUST00000055758 Lman1Q9D0F3 517 aa18.18■□□□□ 0.5
Ubr3-201ENSMUST00000055758 Cfap53Q9D439 514 aa18.18■□□□□ 0.5
Ubr3-201ENSMUST00000055758 Krt84Q99M73 603 aa18.17■□□□□ 0.5
Ubr3-201ENSMUST00000055758 TatQ8QZR1 454 aa18.17■□□□□ 0.5
Ubr3-201ENSMUST00000055758 Iffo1Q8BXL9 562 aa18.16■□□□□ 0.5
Ubr3-201ENSMUST00000055758 Tspyl2Q7TQI8 677 aa18.16■□□□□ 0.5
Ubr3-201ENSMUST00000055758 Apol7cQ8C6E1 369 aa18.16■□□□□ 0.5
Ubr3-201ENSMUST00000055758 Ptpdc1Q6NZK8 747 aa18.16■□□□□ 0.5
Ubr3-201ENSMUST00000055758 Plekhd1B2RPU2 505 aa18.16■□□□□ 0.5
Ubr3-201ENSMUST00000055758 Cetn2Q9R1K9 172 aa18.16■□□□□ 0.5
Ubr3-201ENSMUST00000055758 Mcm6P97311 821 aa18.16■□□□□ 0.5
Ubr3-201ENSMUST00000055758 Lrrfip1Q3UZ39 729 aaKnown RBP18.16■□□□□ 0.5
Ubr3-201ENSMUST00000055758 Rbm27Q5SFM8 1060 aaKnown RBP18.16■□□□□ 0.5
Ubr3-201ENSMUST00000055758 Gjc1P28229 396 aa18.16■□□□□ 0.5
Ubr3-201ENSMUST00000055758 Ell2Q3UKU1 639 aa18.15■□□□□ 0.5
Ubr3-201ENSMUST00000055758 Vps18Q8R307 973 aa18.15■□□□□ 0.5
Ubr3-201ENSMUST00000055758 Exoc6bA6H5Z3 810 aa18.15■□□□□ 0.5
Ubr3-201ENSMUST00000055758 Bank1Q80VH0 783 aa18.15■□□□□ 0.5
Ubr3-201ENSMUST00000055758 Tmc2Q8R4P4 888 aa18.15■□□□□ 0.5
Ubr3-201ENSMUST00000055758 Stard3nlQ9DCI3 235 aa18.15■□□□□ 0.5
Ubr3-201ENSMUST00000055758 Gm21680A0A0G2JGR8 267 aa18.15■□□□□ 0.5
Ubr3-201ENSMUST00000055758 Smarcc1P97496 1104 aa18.15■□□□□ 0.5
Ubr3-201ENSMUST00000055758 Gm44503E9PYU5 387 aa18.15■□□□□ 0.5
Ubr3-201ENSMUST00000055758 Cdr1E9Q0B4 517 aa18.15■□□□□ 0.5
Ubr3-201ENSMUST00000055758 Smtnl1Q99LM3 459 aa18.15■□□□□ 0.5
Ubr3-201ENSMUST00000055758 Bin1O08539 588 aaKnown RBP18.15■□□□□ 0.5
Ubr3-201ENSMUST00000055758 Rhot2Q8JZN7 620 aa18.15■□□□□ 0.5
Ubr3-201ENSMUST00000055758 Ankrd36D3Z4K0 1415 aa18.15■□□□□ 0.5
Ubr3-201ENSMUST00000055758 Pdcl2Q78Y63 240 aa18.15■□□□□ 0.5
Ubr3-201ENSMUST00000055758 Nup133Q8R0G9 1155 aa18.15■□□□□ 0.5
Ubr3-201ENSMUST00000055758 Serpinb6bO08804 377 aa18.14■□□□□ 0.5
Ubr3-201ENSMUST00000055758 ZfxP17012 799 aa18.14■□□□□ 0.5
Ubr3-201ENSMUST00000055758 Abcf1Q6P542 837 aaKnown RBP18.14■□□□□ 0.5
Ubr3-201ENSMUST00000055758 Ttc19Q8CC21 365 aa18.14■□□□□ 0.49
Ubr3-201ENSMUST00000055758 Brf1Q8CFK2 676 aa18.14■□□□□ 0.49
Ubr3-201ENSMUST00000055758 Ces1hD3Z298 562 aa18.14■□□□□ 0.49
Ubr3-201ENSMUST00000055758 Ggnbp2Q5SV77 696 aa18.14■□□□□ 0.49
Ubr3-201ENSMUST00000055758 Zranb3Q6NZP1 1069 aa18.14■□□□□ 0.49
Ubr3-201ENSMUST00000055758 Txndc16Q7TN22 820 aa18.14■□□□□ 0.49
Ubr3-201ENSMUST00000055758 HypkQ9CR41 129 aa18.14■□□□□ 0.49
Ubr3-201ENSMUST00000055758 Gtf3c5Q8R2T8 520 aa18.13■□□□□ 0.49
Ubr3-201ENSMUST00000055758 Smarca5Q91ZW3 1051 aaKnown RBP18.13■□□□□ 0.49
Ubr3-201ENSMUST00000055758 Zrsr1Q64707 428 aa18.13■□□□□ 0.49
Ubr3-201ENSMUST00000055758 Tacc1Q6Y685 774 aa18.13■□□□□ 0.49
Ubr3-201ENSMUST00000055758 Maco1Q7TQE6 664 aaKnown RBP18.12■□□□□ 0.49
Ubr3-201ENSMUST00000055758 Nfxl1E9Q8I7 918 aaKnown RBP18.12■□□□□ 0.49
Ubr3-201ENSMUST00000055758 Hdhd2Q3UGR5 259 aa18.12■□□□□ 0.49
Ubr3-201ENSMUST00000055758 Cdca7Q9D0M2 382 aa18.12■□□□□ 0.49
Ubr3-201ENSMUST00000055758 Camk4P08414 469 aa18.12■□□□□ 0.49
Ubr3-201ENSMUST00000055758 Rfc1P35601 1131 aa18.12■□□□□ 0.49
Ubr3-201ENSMUST00000055758 Wasf1Q8R5H6 559 aa18.11■□□□□ 0.49
Ubr3-201ENSMUST00000055758 4931400O07RikQ9D4M5 137 aa18.11■□□□□ 0.49
Ubr3-201ENSMUST00000055758 Gjb2Q00977 226 aa18.11■□□□□ 0.49
Retrieved 100 of 22,080 RNA–protein pairs in 12.3 ms