RNA–Protein interactions for RNA: ENSMUST00000034060.6

Sh3rf1-201, Transcript of E3 ubiquitin-protein ligase SH3RF1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sh3rf1, Length 5,479 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1-201ENSMUST00000034060 ZwintQ9CQU5 252 aa27.03■■□□□ 1.92
Sh3rf1-201ENSMUST00000034060 4931400O07RikQ9D4M5 137 aa27.03■■□□□ 1.92
Sh3rf1-201ENSMUST00000034060 Gsdma2Q32M21 443 aa27.03■■□□□ 1.92
Sh3rf1-201ENSMUST00000034060 Dydc1Q9D9T0 175 aa27.03■■□□□ 1.92
Sh3rf1-201ENSMUST00000034060 Sass6Q80UK7 654 aa27.02■■□□□ 1.92
Sh3rf1-201ENSMUST00000034060 Gjb2Q00977 226 aa27.02■■□□□ 1.92
Sh3rf1-201ENSMUST00000034060 Exoc8Q6PGF7 716 aa27.02■■□□□ 1.92
Sh3rf1-201ENSMUST00000034060 Q9D9H8 365 aa27.02■■□□□ 1.92
Sh3rf1-201ENSMUST00000034060 Dhx9O70133 1380 aaKnown RBP27.01■■□□□ 1.91
Sh3rf1-201ENSMUST00000034060 Zkscan7E9PVW1 718 aa27.01■■□□□ 1.91
Sh3rf1-201ENSMUST00000034060 Rad54l2Q99NG0 1466 aa27.01■■□□□ 1.91
Sh3rf1-201ENSMUST00000034060 Fkbp4P30416 458 aa27■■□□□ 1.91
Sh3rf1-201ENSMUST00000034060 Cep131Q62036 1060 aa27■■□□□ 1.91
Sh3rf1-201ENSMUST00000034060 Tspyl2Q7TQI8 677 aa27■■□□□ 1.91
Sh3rf1-201ENSMUST00000034060 Fam13aQ8BGI4 693 aa27■■□□□ 1.91
Sh3rf1-201ENSMUST00000034060 Kank1E9Q238 1360 aa27■■□□□ 1.91
Sh3rf1-201ENSMUST00000034060 Adcy5P84309 1262 aa27■■□□□ 1.91
Sh3rf1-201ENSMUST00000034060 Ncbp3Q8BZR9 615 aaKnown RBP26.99■■□□□ 1.91
Sh3rf1-201ENSMUST00000034060 Iqca1Q9CUL5 857 aa26.99■■□□□ 1.91
Sh3rf1-201ENSMUST00000034060 Stx1aO35526 288 aa26.99■■□□□ 1.91
Sh3rf1-201ENSMUST00000034060 Cpa2Q504N0 417 aa26.99■■□□□ 1.91
Sh3rf1-201ENSMUST00000034060 Cfap53Q9D439 514 aa26.99■■□□□ 1.91
Sh3rf1-201ENSMUST00000034060 Stxbp4Q9WV89 557 aa26.99■■□□□ 1.91
Sh3rf1-201ENSMUST00000034060 Bag4Q8CI61 457 aa26.99■■□□□ 1.91
Sh3rf1-201ENSMUST00000034060 Ccdc73Q8CDM4 1066 aa26.98■■□□□ 1.91
Sh3rf1-201ENSMUST00000034060 Trim11Q99PQ2 467 aa26.98■■□□□ 1.91
Sh3rf1-201ENSMUST00000034060 Gm1043A0A140LJC2 1431 aa26.98■■□□□ 1.91
Sh3rf1-201ENSMUST00000034060 Tubb4aQ9D6F9 444 aa26.98■■□□□ 1.91
Sh3rf1-201ENSMUST00000034060 PalmQ9Z0P4 383 aa26.98■■□□□ 1.91
Sh3rf1-201ENSMUST00000034060 Bms1Q6PGF5 1284 aaKnown RBP26.97■■□□□ 1.91
Sh3rf1-201ENSMUST00000034060 MlecQ6ZQI3 291 aaKnown RBP26.97■■□□□ 1.91
Sh3rf1-201ENSMUST00000034060 Gm45140A0A0N4SUM8 220 aa26.97■■□□□ 1.91
Sh3rf1-201ENSMUST00000034060 Map2k1P31938 393 aa26.96■■□□□ 1.91
Sh3rf1-201ENSMUST00000034060 Gm1979E9QAN3 267 aa26.96■■□□□ 1.91
Sh3rf1-201ENSMUST00000034060 Mum1Q6DID5 682 aa26.96■■□□□ 1.91
Sh3rf1-201ENSMUST00000034060 Plekhd1B2RPU2 505 aa26.96■■□□□ 1.91
Sh3rf1-201ENSMUST00000034060 Tbc1d32Q3URV1 1296 aa26.96■■□□□ 1.91
Sh3rf1-201ENSMUST00000034060 Clul1Q3ZRW6 464 aa26.96■■□□□ 1.91
Sh3rf1-201ENSMUST00000034060 Tmc2Q8R4P4 888 aa26.96■■□□□ 1.91
Sh3rf1-201ENSMUST00000034060 Luzp1Q8R4U7 1068 aaKnown RBP26.96■■□□□ 1.91
Sh3rf1-201ENSMUST00000034060 Ddx58Q6Q899 926 aa26.95■■□□□ 1.91
Sh3rf1-201ENSMUST00000034060 Brf1Q8CFK2 676 aa26.95■■□□□ 1.91
Sh3rf1-201ENSMUST00000034060 Ube2hP62257 183 aa26.95■■□□□ 1.9
Sh3rf1-201ENSMUST00000034060 Smtnl1Q99LM3 459 aa26.95■■□□□ 1.9
Sh3rf1-201ENSMUST00000034060 Znf692Q3U381 531 aa26.95■■□□□ 1.9
Sh3rf1-201ENSMUST00000034060 Pof1bQ8K4L4 587 aa26.95■■□□□ 1.9
Sh3rf1-201ENSMUST00000034060 Smg7Q5RJH6 1138 aaKnown RBP26.95■■□□□ 1.9
Sh3rf1-201ENSMUST00000034060 Gimap6Q8K349 305 aa26.95■■□□□ 1.9
Sh3rf1-201ENSMUST00000034060 Ccdc150Q8CDI7 1110 aa26.94■■□□□ 1.9
Sh3rf1-201ENSMUST00000034060 Spty2d1Q68FG3 682 aa26.94■■□□□ 1.9
Sh3rf1-201ENSMUST00000034060 Cep135Q6P5D4 1140 aa26.94■■□□□ 1.9
Sh3rf1-201ENSMUST00000034060 Snw1Q9CSN1 536 aaKnown RBP26.94■■□□□ 1.9
Sh3rf1-201ENSMUST00000034060 AidaQ8C4Q6 305 aa26.94■■□□□ 1.9
Sh3rf1-201ENSMUST00000034060 Ktn1Q61595 1327 aaKnown RBP26.93■■□□□ 1.9
Sh3rf1-201ENSMUST00000034060 Arhgap31A6X8Z5 1425 aa26.93■■□□□ 1.9
Sh3rf1-201ENSMUST00000034060 Cdk19Q8BWD8 501 aa26.93■■□□□ 1.9
Sh3rf1-201ENSMUST00000034060 Ccdc158Q8CDI6 1109 aa26.93■■□□□ 1.9
Sh3rf1-201ENSMUST00000034060 Ncapg2Q6DFV1 1138 aa26.93■■□□□ 1.9
Sh3rf1-201ENSMUST00000034060 Riok1Q922Q2 567 aa26.93■■□□□ 1.9
Sh3rf1-201ENSMUST00000034060 Tacc1Q6Y685 774 aa26.92■■□□□ 1.9
Sh3rf1-201ENSMUST00000034060 Ncoa1P70365 1447 aa26.92■■□□□ 1.9
Sh3rf1-201ENSMUST00000034060 Rasa1E9PYG6 1038 aa26.92■■□□□ 1.9
Sh3rf1-201ENSMUST00000034060 Ccdc172Q810N9 267 aa26.92■■□□□ 1.9
Sh3rf1-201ENSMUST00000034060 Mcm3P25206 812 aaKnown RBP26.92■■□□□ 1.9
Sh3rf1-201ENSMUST00000034060 Slc52a2Q9D8F3 450 aa26.92■■□□□ 1.9
Sh3rf1-201ENSMUST00000034060 DroshaQ5HZJ0 1373 aaKnown RBP26.91■■□□□ 1.9
Sh3rf1-201ENSMUST00000034060 Gm7298A0A0N4SVU1 1476 aa26.91■■□□□ 1.9
Sh3rf1-201ENSMUST00000034060 Ddx46Q569Z5 1032 aaKnown RBP26.91■■□□□ 1.9
Sh3rf1-201ENSMUST00000034060 Bbof1Q3V079 533 aa26.91■■□□□ 1.9
Sh3rf1-201ENSMUST00000034060 Kif2aP28740 705 aa26.9■■□□□ 1.9
Sh3rf1-201ENSMUST00000034060 Naa15Q80UM3 865 aaKnown RBP26.9■■□□□ 1.9
Sh3rf1-201ENSMUST00000034060 Dennd6aQ8BH65 605 aa26.9■■□□□ 1.9
Sh3rf1-201ENSMUST00000034060 Ccdc93Q7TQK5 629 aa26.9■■□□□ 1.9
Sh3rf1-201ENSMUST00000034060 Limch1Q3UH68 1057 aa26.89■■□□□ 1.9
Sh3rf1-201ENSMUST00000034060 Gas2l3Q3UWW6 683 aa26.89■■□□□ 1.9
Sh3rf1-201ENSMUST00000034060 Smco2Q9DA21 347 aa26.89■■□□□ 1.9
Sh3rf1-201ENSMUST00000034060 Naip2Q9QUK4 1447 aa26.89■■□□□ 1.9
Sh3rf1-201ENSMUST00000034060 Trim34bJ3QNR8 485 aa26.89■■□□□ 1.9
Sh3rf1-201ENSMUST00000034060 Smc1aQ9CU62 1233 aaKnown RBP26.89■■□□□ 1.9
Sh3rf1-201ENSMUST00000034060 Ncbp1Q3UYV9 790 aaKnown RBP26.89■■□□□ 1.9
Sh3rf1-201ENSMUST00000034060 ClasrpQ8CFC7 668 aa26.89■■□□□ 1.89
Sh3rf1-201ENSMUST00000034060 Nap1l5Q9JJF0 156 aa26.89■■□□□ 1.89
Sh3rf1-201ENSMUST00000034060 Cetn2Q9R1K9 172 aa26.89■■□□□ 1.89
Sh3rf1-201ENSMUST00000034060 Fnbp4Q6ZQ03 1031 aa26.88■■□□□ 1.89
Sh3rf1-201ENSMUST00000034060 Acbd3Q8BMP6 525 aa26.88■■□□□ 1.89
Sh3rf1-201ENSMUST00000034060 Ccdc178Q8CDV0 866 aa26.88■■□□□ 1.89
Sh3rf1-201ENSMUST00000034060 Stx6Q9JKK1 255 aa26.88■■□□□ 1.89
Sh3rf1-201ENSMUST00000034060 Mmel1Q9JLI3 765 aa26.88■■□□□ 1.89
Sh3rf1-201ENSMUST00000034060 Ppp1r15aP17564 657 aa26.86■■□□□ 1.89
Sh3rf1-201ENSMUST00000034060 Tsg101Q61187 391 aa26.86■■□□□ 1.89
Sh3rf1-201ENSMUST00000034060 Exoc6bA6H5Z3 810 aa26.86■■□□□ 1.89
Sh3rf1-201ENSMUST00000034060 Fam163aQ8CAA5 168 aa26.86■■□□□ 1.89
Sh3rf1-201ENSMUST00000034060 Nol7Q9D7Z3 254 aaKnown RBP26.86■■□□□ 1.89
Sh3rf1-201ENSMUST00000034060 Ctr9Q62018 1173 aaKnown RBP26.86■■□□□ 1.89
Sh3rf1-201ENSMUST00000034060 Nap1l2P51860 460 aa26.86■■□□□ 1.89
Sh3rf1-201ENSMUST00000034060 Zranb3Q6NZP1 1069 aa26.86■■□□□ 1.89
Sh3rf1-201ENSMUST00000034060 TchhA0A0B4J1F9 1599 aa26.85■■□□□ 1.89
Sh3rf1-201ENSMUST00000034060 Mroh2bQ7M6Y6 1581 aa26.85■■□□□ 1.89
Sh3rf1-201ENSMUST00000034060 Cdca8Q8BHX3 289 aa26.85■■□□□ 1.89
Sh3rf1-201ENSMUST00000034060 Flad1Q8R123 492 aa26.85■■□□□ 1.89
Retrieved 100 of 22,080 RNA–protein pairs in 28.6 ms