RNA–Protein interactions for RNA: ENSMUST00000033540.5

Vbp1-201, Transcript of Prefoldin subunit 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vbp1, Length 1,595 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vbp1-201ENSMUST00000033540 Ccdc30Q8BVF4 654 aa13.68□□□□□ -0.22
Vbp1-201ENSMUST00000033540 MypopQ8R4U1 393 aa13.68□□□□□ -0.22
Vbp1-201ENSMUST00000033540 Evx2P49749 475 aa13.67□□□□□ -0.22
Vbp1-201ENSMUST00000033540 Zpr1Q62384 459 aa13.67□□□□□ -0.22
Vbp1-201ENSMUST00000033540 Atxn3Q9CVD2 355 aa13.67□□□□□ -0.22
Vbp1-201ENSMUST00000033540 PappaQ8R4K8 1624 aa13.67□□□□□ -0.22
Vbp1-201ENSMUST00000033540 Larp1bA0A0A6YXJ7 370 aaKnown RBP13.66□□□□□ -0.22
Vbp1-201ENSMUST00000033540 Pak3Q61036 559 aa13.66□□□□□ -0.22
Vbp1-201ENSMUST00000033540 Ttc41Q692V3 1318 aa13.66□□□□□ -0.22
Vbp1-201ENSMUST00000033540 Mst1rQ62190 1378 aa13.66□□□□□ -0.22
Vbp1-201ENSMUST00000033540 Ubr2Q6WKZ8 1755 aa13.66□□□□□ -0.22
Vbp1-201ENSMUST00000033540 Ecm2Q5FW85 670 aa13.66□□□□□ -0.22
Vbp1-201ENSMUST00000033540 Neurod2Q62414 383 aa13.66□□□□□ -0.22
Vbp1-201ENSMUST00000033540 Cc2d1aQ8K1A6 943 aa13.66□□□□□ -0.22
Vbp1-201ENSMUST00000033540 Aox2Q5SGK3 1345 aa13.66□□□□□ -0.22
Vbp1-201ENSMUST00000033540 Abcc12Q80WJ6 1366 aa13.65□□□□□ -0.22
Vbp1-201ENSMUST00000033540 Aplp2Q06335 707 aa13.65□□□□□ -0.22
Vbp1-201ENSMUST00000033540 Cypt2Q6P924 180 aa13.65□□□□□ -0.22
Vbp1-201ENSMUST00000033540 4930572O03RikQ8C5Y0 211 aa13.65□□□□□ -0.22
Vbp1-201ENSMUST00000033540 Nwd2Q6P5U7 1742 aa13.65□□□□□ -0.22
Vbp1-201ENSMUST00000033540 Ttc21aQ8C0S4 1314 aa13.65□□□□□ -0.22
Vbp1-201ENSMUST00000033540 Ankrd50F7BE84 1390 aa13.65□□□□□ -0.22
Vbp1-201ENSMUST00000033540 Ccdc129Q14B48 1034 aa13.64□□□□□ -0.23
Vbp1-201ENSMUST00000033540 Pm20d1Q8C165 503 aa13.64□□□□□ -0.23
Vbp1-201ENSMUST00000033540 InhbeO08717 350 aa13.63□□□□□ -0.23
Vbp1-201ENSMUST00000033540 Sos1Q62245 1319 aa13.63□□□□□ -0.23
Vbp1-201ENSMUST00000033540 Ltbp1Q8CG19 1712 aa13.63□□□□□ -0.23
Vbp1-201ENSMUST00000033540 Rtf1A2AQ19 715 aaKnown RBP13.62□□□□□ -0.23
Vbp1-201ENSMUST00000033540 Kank1E9Q238 1360 aa13.62□□□□□ -0.23
Vbp1-201ENSMUST00000033540 Psrc1Q9D0P7 329 aa13.62□□□□□ -0.23
Vbp1-201ENSMUST00000033540 Plekhh1Q80TI1 1356 aa13.62□□□□□ -0.23
Vbp1-201ENSMUST00000033540 Kcnh4A2A5F7 1018 aa13.62□□□□□ -0.23
Vbp1-201ENSMUST00000033540 Egfem1Q8C088 590 aa13.62□□□□□ -0.23
Vbp1-201ENSMUST00000033540 Gnai1B2RSH2 354 aa13.61□□□□□ -0.23
Vbp1-201ENSMUST00000033540 Ginm1Q91WR6 327 aa13.61□□□□□ -0.23
Vbp1-201ENSMUST00000033540 Phkg2Q9DB30 406 aa13.61□□□□□ -0.23
Vbp1-201ENSMUST00000033540 Gnai3Q9DC51 354 aa13.61□□□□□ -0.23
Vbp1-201ENSMUST00000033540 Fam50bQ9WTJ8 334 aa13.61□□□□□ -0.23
Vbp1-201ENSMUST00000033540 Snap23O09044 210 aa13.6□□□□□ -0.23
Vbp1-201ENSMUST00000033540 Ssfa2Q922B9 1252 aa13.6□□□□□ -0.23
Vbp1-201ENSMUST00000033540 Vps33bP59016 617 aa13.59□□□□□ -0.23
Vbp1-201ENSMUST00000033540 Eif3bQ8JZQ9 803 aaKnown RBP13.59□□□□□ -0.23
Vbp1-201ENSMUST00000033540 Pdzd9Q9D9M4 266 aa13.59□□□□□ -0.23
Vbp1-201ENSMUST00000033540 Dlg5E9Q9R9 1921 aa13.59□□□□□ -0.23
Vbp1-201ENSMUST00000033540 L3mbtl2P59178 703 aa13.58□□□□□ -0.23
Vbp1-201ENSMUST00000033540 Sf3b2Q3UJB0 878 aaKnown RBP13.58□□□□□ -0.23
Vbp1-201ENSMUST00000033540 Gas2l2Q5SSG4 860 aa13.58□□□□□ -0.23
Vbp1-201ENSMUST00000033540 Cdc37l1Q9CZP7 335 aa13.58□□□□□ -0.23
Vbp1-201ENSMUST00000033540 Eno4Q8C042 619 aa13.58□□□□□ -0.24
Vbp1-201ENSMUST00000033540 Speer4bQ9D9F7 267 aa13.58□□□□□ -0.24
Vbp1-201ENSMUST00000033540 Erbb3Q61526 1339 aa13.57□□□□□ -0.24
Vbp1-201ENSMUST00000033540 Rbm25B2RY56 838 aaKnown RBP13.57□□□□□ -0.24
Vbp1-201ENSMUST00000033540 Ksr2Q3UVC0 959 aa13.57□□□□□ -0.24
Vbp1-201ENSMUST00000033540 Ankrd23Q812A3 306 aa13.57□□□□□ -0.24
Vbp1-201ENSMUST00000033540 Tjp1P39447 1745 aaKnown RBP13.56□□□□□ -0.24
Vbp1-201ENSMUST00000033540 Gm21680A0A0G2JGR8 267 aa13.56□□□□□ -0.24
Vbp1-201ENSMUST00000033540 Upf2A2AT37 1269 aaKnown RBP13.56□□□□□ -0.24
Vbp1-201ENSMUST00000033540 NudcO35685 332 aaKnown RBP13.56□□□□□ -0.24
Vbp1-201ENSMUST00000033540 Sik1Q60670 779 aa13.56□□□□□ -0.24
Vbp1-201ENSMUST00000033540 Elp1Q7TT37 1333 aaKnown RBP13.55□□□□□ -0.24
Vbp1-201ENSMUST00000033540 Shank3Q4ACU6 1730 aa13.55□□□□□ -0.24
Vbp1-201ENSMUST00000033540 Asic4Q7TNS7 539 aa13.55□□□□□ -0.24
Vbp1-201ENSMUST00000033540 Ccar1Q8CH18 1146 aaKnown RBP13.55□□□□□ -0.24
Vbp1-201ENSMUST00000033540 Chmp7Q8R1T1 451 aa13.55□□□□□ -0.24
Vbp1-201ENSMUST00000033540 Igsf1Q7TQA1 1317 aa13.55□□□□□ -0.24
Vbp1-201ENSMUST00000033540 Prim1P20664 417 aa13.54□□□□□ -0.24
Vbp1-201ENSMUST00000033540 CastP51125 788 aa13.54□□□□□ -0.24
Vbp1-201ENSMUST00000033540 Nkx2-3P97334 362 aa13.54□□□□□ -0.24
Vbp1-201ENSMUST00000033540 Larp1Q6ZQ58 1072 aaKnown RBP13.54□□□□□ -0.24
Vbp1-201ENSMUST00000033540 Ggnbp2Q5SV77 696 aa13.54□□□□□ -0.24
Vbp1-201ENSMUST00000033540 Foxp4Q9DBY0 795 aaKnown RBP13.54□□□□□ -0.24
Vbp1-201ENSMUST00000033540 Ly75Q60767 1723 aa13.53□□□□□ -0.24
Vbp1-201ENSMUST00000033540 Tiam2Q6ZPF3 1715 aa13.53□□□□□ -0.24
Vbp1-201ENSMUST00000033540 Eif5bQ05D44 1216 aaKnown RBP13.53□□□□□ -0.24
Vbp1-201ENSMUST00000033540 Exoc5Q3TPX4 708 aa13.53□□□□□ -0.24
Vbp1-201ENSMUST00000033540 Slc5a1Q8C3K6 665 aa13.53□□□□□ -0.24
Vbp1-201ENSMUST00000033540 Klhdc4Q921I2 584 aa13.53□□□□□ -0.24
Vbp1-201ENSMUST00000033540 BcorQ8CGN4 1759 aa13.52□□□□□ -0.25
Vbp1-201ENSMUST00000033540 Usp16Q99LG0 825 aa13.52□□□□□ -0.25
Vbp1-201ENSMUST00000033540 Gm21663A0A0G2JE01 267 aa13.51□□□□□ -0.25
Vbp1-201ENSMUST00000033540 Gm7361D3Z6R1 267 aa13.51□□□□□ -0.25
Vbp1-201ENSMUST00000033540 5031410I06RikE9Q4E0 267 aa13.51□□□□□ -0.25
Vbp1-201ENSMUST00000033540 Gm1979E9QAN3 267 aa13.51□□□□□ -0.25
Vbp1-201ENSMUST00000033540 Gm5862K7N5V5 267 aa13.51□□□□□ -0.25
Vbp1-201ENSMUST00000033540 Gm10220K7N660 267 aa13.51□□□□□ -0.25
Vbp1-201ENSMUST00000033540 Ddb1Q3U1J4 1140 aaKnown RBP13.51□□□□□ -0.25
Vbp1-201ENSMUST00000033540 Sgsm1Q8BPQ7 1093 aa13.51□□□□□ -0.25
Vbp1-201ENSMUST00000033540 Abca3Q8R420 1704 aa13.51□□□□□ -0.25
Vbp1-201ENSMUST00000033540 Crb1Q8VHS2 1405 aa13.51□□□□□ -0.25
Vbp1-201ENSMUST00000033540 Ccdc171E9Q1U1 1324 aa13.51□□□□□ -0.25
Vbp1-201ENSMUST00000033540 Msh6P54276 1358 aaKnown RBP13.5□□□□□ -0.25
Vbp1-201ENSMUST00000033540 U2surpQ6NV83 1029 aaKnown RBP13.5□□□□□ -0.25
Vbp1-201ENSMUST00000033540 Dmrt2Q8BG36 561 aa13.5□□□□□ -0.25
Vbp1-201ENSMUST00000033540 Vamp4O70480 141 aa13.49□□□□□ -0.25
Vbp1-201ENSMUST00000033540 Btbd11Q6GQW0 1109 aa13.49□□□□□ -0.25
Vbp1-201ENSMUST00000033540 Tnnt3Q9QZ47 272 aa13.49□□□□□ -0.25
Vbp1-201ENSMUST00000033540 Col1a2Q01149 1372 aa13.49□□□□□ -0.25
Vbp1-201ENSMUST00000033540 Pip4p2Q9CZX7 257 aa13.48□□□□□ -0.25
Vbp1-201ENSMUST00000033540 Atf5O70191 283 aa13.47□□□□□ -0.25
Vbp1-201ENSMUST00000033540 Eif4a1P60843 406 aaKnown RBP13.47□□□□□ -0.25
Retrieved 100 of 22,080 RNA–protein pairs in 93.3 ms