RNA–Protein interactions for RNA: ENSMUST00000022225.11

Trim23-201, Transcript of E3 ubiquitin-protein ligase TRIM23, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim23, Length 3,416 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim23-201ENSMUST00000022225 NinlQ6ZQ12 1394 aa14.94□□□□□ -0.02
Trim23-201ENSMUST00000022225 Eif2ak4Q9QZ05 1648 aa14.94□□□□□ -0.02
Trim23-201ENSMUST00000022225 Oas2E9Q9A9 742 aa14.94□□□□□ -0.02
Trim23-201ENSMUST00000022225 Ddx41Q91VN6 622 aaKnown RBP14.94□□□□□ -0.02
Trim23-201ENSMUST00000022225 Vamp4O70480 141 aa14.94□□□□□ -0.02
Trim23-201ENSMUST00000022225 Mmel1Q9JLI3 765 aa14.94□□□□□ -0.02
Trim23-201ENSMUST00000022225 Rtf1A2AQ19 715 aaKnown RBP14.93□□□□□ -0.02
Trim23-201ENSMUST00000022225 Efcab6Q6P1E8 1516 aa14.93□□□□□ -0.02
Trim23-201ENSMUST00000022225 Cpa2Q504N0 417 aa14.93□□□□□ -0.02
Trim23-201ENSMUST00000022225 Casc1Q6TDU8 730 aa14.93□□□□□ -0.02
Trim23-201ENSMUST00000022225 HnrnpuQ8VEK3 800 aaKnown RBP14.93□□□□□ -0.02
Trim23-201ENSMUST00000022225 Uggt1Q6P5E4 1551 aa14.93□□□□□ -0.02
Trim23-201ENSMUST00000022225 Atp7bQ64446 1462 aa14.92□□□□□ -0.02
Trim23-201ENSMUST00000022225 Abca17E9PX95 1733 aa14.92□□□□□ -0.02
Trim23-201ENSMUST00000022225 Abcc3B2RX12 1523 aa14.92□□□□□ -0.02
Trim23-201ENSMUST00000022225 Cdc42bpgQ80UW5 1551 aa14.92□□□□□ -0.02
Trim23-201ENSMUST00000022225 Mum1Q6DID5 682 aa14.92□□□□□ -0.02
Trim23-201ENSMUST00000022225 Erc2Q6PH08 957 aa14.92□□□□□ -0.02
Trim23-201ENSMUST00000022225 St18Q80TY4 1045 aa14.92□□□□□ -0.02
Trim23-201ENSMUST00000022225 Ccar2Q8VDP4 922 aaKnown RBP14.92□□□□□ -0.02
Trim23-201ENSMUST00000022225 Capn2O08529 700 aa14.91□□□□□ -0.02
Trim23-201ENSMUST00000022225 Tpm3P21107 285 aaKnown RBP14.91□□□□□ -0.02
Trim23-201ENSMUST00000022225 Cdkn1cP49919 348 aa14.91□□□□□ -0.02
Trim23-201ENSMUST00000022225 Abca8aQ8K442 1620 aa14.91□□□□□ -0.02
Trim23-201ENSMUST00000022225 Ess2O70279 479 aa14.91□□□□□ -0.02
Trim23-201ENSMUST00000022225 Zmynd15Q8C0R7 736 aa14.91□□□□□ -0.02
Trim23-201ENSMUST00000022225 4930548H24RikQ9D496 437 aa14.91□□□□□ -0.02
Trim23-201ENSMUST00000022225 MaddQ80U28 1577 aa14.91□□□□□ -0.02
Trim23-201ENSMUST00000022225 Card6E9PWH2 1175 aa14.91□□□□□ -0.02
Trim23-201ENSMUST00000022225 Puf60Q3UEB3 564 aaKnown RBP14.91□□□□□ -0.02
Trim23-201ENSMUST00000022225 Map3k5O35099 1380 aa14.9□□□□□ -0.02
Trim23-201ENSMUST00000022225 Fkbp15Q6P9Q6 1216 aaKnown RBP14.9□□□□□ -0.02
Trim23-201ENSMUST00000022225 LlphQ9D945 130 aaKnown RBP14.9□□□□□ -0.02
Trim23-201ENSMUST00000022225 Dip2aQ8BWT5 1523 aa14.9□□□□□ -0.02
Trim23-201ENSMUST00000022225 Tpd52l1O54818 204 aa14.89□□□□□ -0.03
Trim23-201ENSMUST00000022225 CebpzP53569 1052 aaKnown RBP14.89□□□□□ -0.03
Trim23-201ENSMUST00000022225 Filip1lQ6P6L0 1131 aa14.89□□□□□ -0.03
Trim23-201ENSMUST00000022225 Mrvi1Q9WUX5 899 aaKnown RBP14.89□□□□□ -0.03
Trim23-201ENSMUST00000022225 Atp10dQ8K2X1 1416 aa14.89□□□□□ -0.03
Trim23-201ENSMUST00000022225 Zkscan5Q9Z1D8 819 aa14.89□□□□□ -0.03
Trim23-201ENSMUST00000022225 Nrxn1Q9CS84 1514 aa14.89□□□□□ -0.03
Trim23-201ENSMUST00000022225 Klhl34A2AI76 644 aa14.89□□□□□ -0.03
Trim23-201ENSMUST00000022225 Cfap73J3QPZ5 306 aa14.89□□□□□ -0.03
Trim23-201ENSMUST00000022225 Atp6v1dP57746 247 aa14.89□□□□□ -0.03
Trim23-201ENSMUST00000022225 Rab3gap1Q80UJ7 981 aa14.89□□□□□ -0.03
Trim23-201ENSMUST00000022225 Ulbp1Q8HWA3 334 aa14.89□□□□□ -0.03
Trim23-201ENSMUST00000022225 Cdc37l1Q9CZP7 335 aa14.89□□□□□ -0.03
Trim23-201ENSMUST00000022225 Utp3Q9JI13 469 aaKnown RBP14.89□□□□□ -0.03
Trim23-201ENSMUST00000022225 Plxnc1Q9QZC2 1574 aa14.88□□□□□ -0.03
Trim23-201ENSMUST00000022225 Q4VA45 678 aa14.88□□□□□ -0.03
Trim23-201ENSMUST00000022225 Ap3b2Q9JME5 1082 aa14.88□□□□□ -0.03
Trim23-201ENSMUST00000022225 Tmem131lQ3U3D7 1597 aa14.88□□□□□ -0.03
Trim23-201ENSMUST00000022225 Zscan22Q8BGS5 496 aa14.88□□□□□ -0.03
Trim23-201ENSMUST00000022225 AnlnQ8K298 1121 aaKnown RBP14.88□□□□□ -0.03
Trim23-201ENSMUST00000022225 Jph4Q80WT0 628 aa14.88□□□□□ -0.03
Trim23-201ENSMUST00000022225 Smarca5Q91ZW3 1051 aaKnown RBP14.88□□□□□ -0.03
Trim23-201ENSMUST00000022225 Q9D2X8 372 aa14.88□□□□□ -0.03
Trim23-201ENSMUST00000022225 Usp32F8VPZ3 1604 aa14.87□□□□□ -0.03
Trim23-201ENSMUST00000022225 Ccdc162pQ0VG85 912 aa14.87□□□□□ -0.03
Trim23-201ENSMUST00000022225 Zfp397Q7TNK4 527 aa14.87□□□□□ -0.03
Trim23-201ENSMUST00000022225 Irx2P81066 474 aa14.87□□□□□ -0.03
Trim23-201ENSMUST00000022225 Tshz1Q5DTH5 1084 aa14.87□□□□□ -0.03
Trim23-201ENSMUST00000022225 Taf3Q5HZG4 932 aa14.87□□□□□ -0.03
Trim23-201ENSMUST00000022225 Mkrn3Q60764 544 aa14.87□□□□□ -0.03
Trim23-201ENSMUST00000022225 Fam13aQ8BGI4 693 aa14.87□□□□□ -0.03
Trim23-201ENSMUST00000022225 Naa30Q8CES0 364 aa14.87□□□□□ -0.03
Trim23-201ENSMUST00000022225 Iqgap3F8VQ29 1632 aa14.87□□□□□ -0.03
Trim23-201ENSMUST00000022225 Map7d2A2AG50 781 aa14.86□□□□□ -0.03
Trim23-201ENSMUST00000022225 Brpf3B2KF05 1204 aaKnown RBP14.86□□□□□ -0.03
Trim23-201ENSMUST00000022225 RdxP26043 583 aaKnown RBP14.86□□□□□ -0.03
Trim23-201ENSMUST00000022225 Tm6sf1P58749 370 aa14.86□□□□□ -0.03
Trim23-201ENSMUST00000022225 Wdr93Q402B2 695 aa14.86□□□□□ -0.03
Trim23-201ENSMUST00000022225 Samm50Q8BGH2 469 aa14.86□□□□□ -0.03
Trim23-201ENSMUST00000022225 Med4Q9CQA5 270 aa14.86□□□□□ -0.03
Trim23-201ENSMUST00000022225 AatfQ9JKX4 526 aaKnown RBP14.86□□□□□ -0.03
Trim23-201ENSMUST00000022225 Skint5A7XUY5 1461 aa14.86□□□□□ -0.03
Trim23-201ENSMUST00000022225 Cdk4P30285 303 aa14.86□□□□□ -0.03
Trim23-201ENSMUST00000022225 Nlrp3Q8R4B8 1033 aa14.86□□□□□ -0.03
Trim23-201ENSMUST00000022225 Stk24Q99KH8 431 aa14.86□□□□□ -0.03
Trim23-201ENSMUST00000022225 Arhgap4B1AUY3 965 aa14.86□□□□□ -0.03
Trim23-201ENSMUST00000022225 RbsnQ80Y56 783 aa14.86□□□□□ -0.03
Trim23-201ENSMUST00000022225 Aldh1l2Q8K009 923 aa14.86□□□□□ -0.03
Trim23-201ENSMUST00000022225 Ifi35Q9D8C4 286 aa14.86□□□□□ -0.03
Trim23-201ENSMUST00000022225 Cspp1B2RX88 1205 aa14.85□□□□□ -0.03
Trim23-201ENSMUST00000022225 Ube2hP62257 183 aa14.85□□□□□ -0.03
Trim23-201ENSMUST00000022225 CenpqQ9CPQ5 267 aa14.85□□□□□ -0.03
Trim23-201ENSMUST00000022225 Zscan29E9Q5B4 869 aa14.85□□□□□ -0.03
Trim23-201ENSMUST00000022225 Ms4a1P19437 291 aa14.85□□□□□ -0.03
Trim23-201ENSMUST00000022225 Pcmtd1P59913 357 aa14.85□□□□□ -0.03
Trim23-201ENSMUST00000022225 MarsQ68FL6 902 aaKnown RBP14.85□□□□□ -0.03
Trim23-201ENSMUST00000022225 Ptch1Q61115 1434 aa14.85□□□□□ -0.03
Trim23-201ENSMUST00000022225 Myo5cE9Q1F5 1742 aa14.84□□□□□ -0.03
Trim23-201ENSMUST00000022225 Phactr2B1AVP0 632 aa14.84□□□□□ -0.03
Trim23-201ENSMUST00000022225 Triml2E9PW10 424 aa14.84□□□□□ -0.03
Trim23-201ENSMUST00000022225 EvcP57680 1005 aa14.84□□□□□ -0.03
Trim23-201ENSMUST00000022225 Cfap157Q0VFX2 523 aa14.84□□□□□ -0.03
Trim23-201ENSMUST00000022225 Phf20l1Q8CCJ9 1013 aa14.84□□□□□ -0.03
Trim23-201ENSMUST00000022225 Mrc2Q64449 1479 aa14.84□□□□□ -0.03
Trim23-201ENSMUST00000022225 Atg4a-psA0A0G2JFS9 396 aa14.83□□□□□ -0.03
Trim23-201ENSMUST00000022225 Cavin2Q63918 418 aaKnown RBP14.83□□□□□ -0.03
Retrieved 100 of 22,080 RNA–protein pairs in 16.8 ms