RNA–Protein interactions for RNA: ENSMUST00000020163.6

Nedd1-201, Transcript of Protein NEDD1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nedd1, Length 3,534 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd1-201ENSMUST00000020163 Vwa3bJ9JI28 736 aa12.12□□□□□ -0.47
Nedd1-201ENSMUST00000020163 Nos1Q9Z0J4 1429 aa12.12□□□□□ -0.47
Nedd1-201ENSMUST00000020163 Q4VA45 678 aa12.12□□□□□ -0.47
Nedd1-201ENSMUST00000020163 Prdm2A2A7B5 1709 aaKnown RBP12.12□□□□□ -0.47
Nedd1-201ENSMUST00000020163 Lrrc7Q80TE7 1490 aa12.12□□□□□ -0.47
Nedd1-201ENSMUST00000020163 Atp2b3Q0VF55 1220 aa12.11□□□□□ -0.47
Nedd1-201ENSMUST00000020163 Cavin2Q63918 418 aaKnown RBP12.11□□□□□ -0.47
Nedd1-201ENSMUST00000020163 Olfml1Q8BSH2 233 aa12.11□□□□□ -0.47
Nedd1-201ENSMUST00000020163 Cbx1P83917 185 aaKnown RBP12.1□□□□□ -0.47
Nedd1-201ENSMUST00000020163 Cdc37l1Q9CZP7 335 aa12.1□□□□□ -0.47
Nedd1-201ENSMUST00000020163 Kif3bQ61771 747 aa12.1□□□□□ -0.47
Nedd1-201ENSMUST00000020163 Aldh1l2Q8K009 923 aa12.1□□□□□ -0.47
Nedd1-201ENSMUST00000020163 Cavin1O54724 392 aa12.1□□□□□ -0.47
Nedd1-201ENSMUST00000020163 NexnQ7TPW1 607 aa12.1□□□□□ -0.47
Nedd1-201ENSMUST00000020163 FanclQ9CR14 375 aa12.1□□□□□ -0.47
Nedd1-201ENSMUST00000020163 Cdk12Q14AX6 1484 aaKnown RBP12.09□□□□□ -0.47
Nedd1-201ENSMUST00000020163 Zkscan16A2ALW2 728 aa12.09□□□□□ -0.47
Nedd1-201ENSMUST00000020163 EzrP26040 586 aaKnown RBP12.09□□□□□ -0.47
Nedd1-201ENSMUST00000020163 Ptch1Q61115 1434 aa12.09□□□□□ -0.47
Nedd1-201ENSMUST00000020163 Prex1Q69ZK0 1650 aa12.09□□□□□ -0.47
Nedd1-201ENSMUST00000020163 Rbm42Q91V81 474 aaKnown RBP12.08□□□□□ -0.47
Nedd1-201ENSMUST00000020163 Mx2Q9WVP9 655 aa12.08□□□□□ -0.47
Nedd1-201ENSMUST00000020163 MarsQ68FL6 902 aaKnown RBP12.08□□□□□ -0.48
Nedd1-201ENSMUST00000020163 Znf518aB2RRF6 1478 aaKnown RBP12.08□□□□□ -0.48
Nedd1-201ENSMUST00000020163 CatipB9EKE5 520 aa12.08□□□□□ -0.48
Nedd1-201ENSMUST00000020163 Tm6sf1P58749 370 aa12.08□□□□□ -0.48
Nedd1-201ENSMUST00000020163 Erc2Q6PH08 957 aa12.08□□□□□ -0.48
Nedd1-201ENSMUST00000020163 IqubQ8CDK3 788 aa12.08□□□□□ -0.48
Nedd1-201ENSMUST00000020163 Tecpr2Q3UH45 1423 aa12.07□□□□□ -0.48
Nedd1-201ENSMUST00000020163 Ythdc1E9Q5K9 736 aaKnown RBP12.07□□□□□ -0.48
Nedd1-201ENSMUST00000020163 Dync1i1O88485 628 aa12.07□□□□□ -0.48
Nedd1-201ENSMUST00000020163 Rtf1A2AQ19 715 aaKnown RBP12.07□□□□□ -0.48
Nedd1-201ENSMUST00000020163 Ap3b2Q9JME5 1082 aa12.07□□□□□ -0.48
Nedd1-201ENSMUST00000020163 Stac3Q8BZ71 360 aa12.07□□□□□ -0.48
Nedd1-201ENSMUST00000020163 Rab11fip3Q8CHD8 1047 aa12.06□□□□□ -0.48
Nedd1-201ENSMUST00000020163 Akap12Q9WTQ5 1684 aa12.06□□□□□ -0.48
Nedd1-201ENSMUST00000020163 Gnai1B2RSH2 354 aa12.06□□□□□ -0.48
Nedd1-201ENSMUST00000020163 Atp6v1dP57746 247 aa12.06□□□□□ -0.48
Nedd1-201ENSMUST00000020163 Adcy5P84309 1262 aa12.06□□□□□ -0.48
Nedd1-201ENSMUST00000020163 Nol11Q8BJW5 723 aaKnown RBP12.06□□□□□ -0.48
Nedd1-201ENSMUST00000020163 LlphQ9D945 130 aaKnown RBP12.06□□□□□ -0.48
Nedd1-201ENSMUST00000020163 Gnai3Q9DC51 354 aa12.06□□□□□ -0.48
Nedd1-201ENSMUST00000020163 Synj2Q9D2G5 1434 aa12.06□□□□□ -0.48
Nedd1-201ENSMUST00000020163 St18Q80TY4 1045 aa12.06□□□□□ -0.48
Nedd1-201ENSMUST00000020163 Fam13aQ8BGI4 693 aa12.05□□□□□ -0.48
Nedd1-201ENSMUST00000020163 AnlnQ8K298 1121 aaKnown RBP12.05□□□□□ -0.48
Nedd1-201ENSMUST00000020163 Slc52a2Q9D8F3 450 aa12.05□□□□□ -0.48
Nedd1-201ENSMUST00000020163 AU022751B1B0V2 589 aa12.05□□□□□ -0.48
Nedd1-201ENSMUST00000020163 Nfatc2ipO09130 412 aa12.05□□□□□ -0.48
Nedd1-201ENSMUST00000020163 Nucb2P81117 420 aa12.05□□□□□ -0.48
Nedd1-201ENSMUST00000020163 SrrtQ99MR6 875 aaKnown RBP12.05□□□□□ -0.48
Nedd1-201ENSMUST00000020163 Topbp1Q6ZQF0 1515 aa12.04□□□□□ -0.48
Nedd1-201ENSMUST00000020163 CtifQ6PEE2 600 aaKnown RBP12.04□□□□□ -0.48
Nedd1-201ENSMUST00000020163 Filip1lQ6P6L0 1131 aa12.04□□□□□ -0.48
Nedd1-201ENSMUST00000020163 Adam1bQ8R534 806 aa12.04□□□□□ -0.48
Nedd1-201ENSMUST00000020163 Slc12a5Q91V14 1138 aa12.04□□□□□ -0.48
Nedd1-201ENSMUST00000020163 Sass6Q80UK7 654 aa12.04□□□□□ -0.48
Nedd1-201ENSMUST00000020163 Exosc9Q9JHI7 438 aaKnown RBP12.04□□□□□ -0.48
Nedd1-201ENSMUST00000020163 PalmQ9Z0P4 383 aa12.04□□□□□ -0.48
Nedd1-201ENSMUST00000020163 Kif20bQ80WE4 1774 aaKnown RBP12.03□□□□□ -0.48
Nedd1-201ENSMUST00000020163 Zfp51Q3U4L8 781 aa12.03□□□□□ -0.48
Nedd1-201ENSMUST00000020163 Sos1Q62245 1319 aa12.03□□□□□ -0.48
Nedd1-201ENSMUST00000020163 Klhl34A2AI76 644 aa12.03□□□□□ -0.48
Nedd1-201ENSMUST00000020163 Trim28Q62318 834 aa12.03□□□□□ -0.48
Nedd1-201ENSMUST00000020163 Dip2aQ8BWT5 1523 aa12.03□□□□□ -0.48
Nedd1-201ENSMUST00000020163 CltcQ68FD5 1675 aaKnown RBP12.03□□□□□ -0.48
Nedd1-201ENSMUST00000020163 Anapc15P60007 132 aa12.03□□□□□ -0.48
Nedd1-201ENSMUST00000020163 Mum1Q6DID5 682 aa12.03□□□□□ -0.48
Nedd1-201ENSMUST00000020163 Serpina10Q8R121 448 aa12.03□□□□□ -0.48
Nedd1-201ENSMUST00000020163 Ccar2Q8VDP4 922 aaKnown RBP12.03□□□□□ -0.48
Nedd1-201ENSMUST00000020163 Alpk3Q924C5 1678 aa12.03□□□□□ -0.48
Nedd1-201ENSMUST00000020163 Casc1Q6TDU8 730 aa12.02□□□□□ -0.48
Nedd1-201ENSMUST00000020163 Ric3Q8BPM6 367 aa12.02□□□□□ -0.48
Nedd1-201ENSMUST00000020163 Q9D2X8 372 aa12.02□□□□□ -0.48
Nedd1-201ENSMUST00000020163 Kif24Q6NWW5 1356 aa12.02□□□□□ -0.49
Nedd1-201ENSMUST00000020163 Gm973E9Q295 1059 aa12.02□□□□□ -0.49
Nedd1-201ENSMUST00000020163 Tpm3P21107 285 aaKnown RBP12.02□□□□□ -0.49
Nedd1-201ENSMUST00000020163 Cyp46a1Q9WVK8 500 aa12.02□□□□□ -0.49
Nedd1-201ENSMUST00000020163 Atg4a-psA0A0G2JFS9 396 aa12.02□□□□□ -0.49
Nedd1-201ENSMUST00000020163 Triml2E9PW10 424 aa12.02□□□□□ -0.49
Nedd1-201ENSMUST00000020163 Atg4aQ8C9S8 396 aa12.02□□□□□ -0.49
Nedd1-201ENSMUST00000020163 Smarce1O54941 411 aaKnown RBP12.01□□□□□ -0.49
Nedd1-201ENSMUST00000020163 Zhx1P70121 873 aa12.01□□□□□ -0.49
Nedd1-201ENSMUST00000020163 Nol8Q3UHX0 1147 aaKnown RBP12.01□□□□□ -0.49
Nedd1-201ENSMUST00000020163 Oxsr1Q6P9R2 527 aa12.01□□□□□ -0.49
Nedd1-201ENSMUST00000020163 Smarca5Q91ZW3 1051 aaKnown RBP12.01□□□□□ -0.49
Nedd1-201ENSMUST00000020163 U2af2P26369 475 aaKnown RBP12□□□□□ -0.49
Nedd1-201ENSMUST00000020163 Ddx19aQ61655 478 aaKnown RBP12□□□□□ -0.49
Nedd1-201ENSMUST00000020163 Kcnf1Q7TSH7 493 aa12□□□□□ -0.49
Nedd1-201ENSMUST00000020163 Phf23Q8BSN5 401 aa12□□□□□ -0.49
Nedd1-201ENSMUST00000020163 Trim30aP15533 496 aa12□□□□□ -0.49
Nedd1-201ENSMUST00000020163 Nxf2Q4ZGD8 691 aa12□□□□□ -0.49
Nedd1-201ENSMUST00000020163 Ccdc7Q9D541 371 aa12□□□□□ -0.49
Nedd1-201ENSMUST00000020163 Spef2Q8C9J3 1734 aa12□□□□□ -0.49
Nedd1-201ENSMUST00000020163 Wdr93Q402B2 695 aa12□□□□□ -0.49
Nedd1-201ENSMUST00000020163 Tmem132aQ922P8 1018 aa12□□□□□ -0.49
Nedd1-201ENSMUST00000020163 Med4Q9CQA5 270 aa12□□□□□ -0.49
Nedd1-201ENSMUST00000020163 Fam114a1Q9D281 569 aa12□□□□□ -0.49
Nedd1-201ENSMUST00000020163 Ccdc162pQ0VG85 912 aa11.99□□□□□ -0.49
Nedd1-201ENSMUST00000020163 Plppr3Q7TPB0 716 aa11.99□□□□□ -0.49
Retrieved 100 of 22,080 RNA–protein pairs in 25 ms