RNA–Protein interactions for RNA: ENSMUST00000002043.9

Ccdc47-201, Transcript of Coiled-coil domain-containing protein 47, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc47, Length 5,193 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc47-201ENSMUST00000002043 Kcnh5Q920E3 988 aa10.67□□□□□ -0.7
Ccdc47-201ENSMUST00000002043 Cecr2E9Q2Z1 1453 aa10.67□□□□□ -0.7
Ccdc47-201ENSMUST00000002043 Hvcn1Q3U2S8 269 aa10.67□□□□□ -0.7
Ccdc47-201ENSMUST00000002043 Ncapg2Q6DFV1 1138 aa10.67□□□□□ -0.7
Ccdc47-201ENSMUST00000002043 Nutm1Q8BHP2 1126 aa10.67□□□□□ -0.7
Ccdc47-201ENSMUST00000002043 Pms1Q8K119 917 aa10.67□□□□□ -0.7
Ccdc47-201ENSMUST00000002043 Map3k1P53349 1493 aa10.67□□□□□ -0.7
Ccdc47-201ENSMUST00000002043 Gm18336A0A140LIU8 765 aa10.67□□□□□ -0.7
Ccdc47-201ENSMUST00000002043 Ampd3O08739 766 aa10.67□□□□□ -0.7
Ccdc47-201ENSMUST00000002043 Ptpdc1Q6NZK8 747 aa10.67□□□□□ -0.7
Ccdc47-201ENSMUST00000002043 Ift57Q8BXG3 429 aa10.67□□□□□ -0.7
Ccdc47-201ENSMUST00000002043 Anapc15-psA0A140T8L6 141 aa10.67□□□□□ -0.7
Ccdc47-201ENSMUST00000002043 Kiaa1524Q8BWY9 907 aa10.67□□□□□ -0.7
Ccdc47-201ENSMUST00000002043 ClasrpQ8CFC7 668 aa10.67□□□□□ -0.7
Ccdc47-201ENSMUST00000002043 Map2k1P31938 393 aa10.66□□□□□ -0.7
Ccdc47-201ENSMUST00000002043 AidaQ8C4Q6 305 aa10.66□□□□□ -0.7
Ccdc47-201ENSMUST00000002043 Iqca1Q9CUL5 857 aa10.66□□□□□ -0.7
Ccdc47-201ENSMUST00000002043 Fkbp4P30416 458 aa10.66□□□□□ -0.7
Ccdc47-201ENSMUST00000002043 Rad23bP54728 416 aa10.66□□□□□ -0.7
Ccdc47-201ENSMUST00000002043 Dennd6aQ8BH65 605 aa10.66□□□□□ -0.7
Ccdc47-201ENSMUST00000002043 Gm1979E9QAN3 267 aa10.66□□□□□ -0.7
Ccdc47-201ENSMUST00000002043 Tubb5P99024 444 aaKnown RBP10.66□□□□□ -0.7
Ccdc47-201ENSMUST00000002043 Cdca8Q8BHX3 289 aa10.66□□□□□ -0.7
Ccdc47-201ENSMUST00000002043 Slc7a3P70423 618 aa10.66□□□□□ -0.7
Ccdc47-201ENSMUST00000002043 DroshaQ5HZJ0 1373 aaKnown RBP10.66□□□□□ -0.7
Ccdc47-201ENSMUST00000002043 NrkQ9R0G8 1455 aa10.65□□□□□ -0.7
Ccdc47-201ENSMUST00000002043 Samd1D3YXK1 519 aa10.65□□□□□ -0.7
Ccdc47-201ENSMUST00000002043 Apaf1O88879 1249 aa10.65□□□□□ -0.7
Ccdc47-201ENSMUST00000002043 Znf692Q3U381 531 aa10.65□□□□□ -0.7
Ccdc47-201ENSMUST00000002043 Q7TT23 1179 aa10.65□□□□□ -0.7
Ccdc47-201ENSMUST00000002043 Vps37dQ810I0 261 aa10.65□□□□□ -0.7
Ccdc47-201ENSMUST00000002043 Acbd3Q8BMP6 525 aa10.65□□□□□ -0.7
Ccdc47-201ENSMUST00000002043 Luzp1Q8R4U7 1068 aaKnown RBP10.65□□□□□ -0.7
Ccdc47-201ENSMUST00000002043 Cdc37l1Q9CZP7 335 aa10.65□□□□□ -0.7
Ccdc47-201ENSMUST00000002043 Ripk4Q9ERK0 786 aa10.65□□□□□ -0.7
Ccdc47-201ENSMUST00000002043 Gbp8Q2V6D6 525 aa10.65□□□□□ -0.7
Ccdc47-201ENSMUST00000002043 Rnf187Q8BFX1 236 aa10.65□□□□□ -0.7
Ccdc47-201ENSMUST00000002043 Cfap69Q8BH53 942 aa10.65□□□□□ -0.7
Ccdc47-201ENSMUST00000002043 Smc1bQ920F6 1248 aa10.65□□□□□ -0.7
Ccdc47-201ENSMUST00000002043 Knop1Q9Z2Q2 478 aaKnown RBP10.65□□□□□ -0.7
Ccdc47-201ENSMUST00000002043 Shtn1Q8K2Q9 631 aa10.65□□□□□ -0.7
Ccdc47-201ENSMUST00000002043 Naip1Q9QWK5 1403 aa10.65□□□□□ -0.7
Ccdc47-201ENSMUST00000002043 Trim30cD3YVI9 513 aa10.65□□□□□ -0.71
Ccdc47-201ENSMUST00000002043 Sf3b2Q3UJB0 878 aaKnown RBP10.65□□□□□ -0.71
Ccdc47-201ENSMUST00000002043 Tacc1Q6Y685 774 aa10.65□□□□□ -0.71
Ccdc47-201ENSMUST00000002043 Maats1Q8BRC6 783 aa10.65□□□□□ -0.71
Ccdc47-201ENSMUST00000002043 Mapk8ip1Q9WVI9 707 aa10.65□□□□□ -0.71
Ccdc47-201ENSMUST00000002043 Ccdc112A0AUP1 442 aa10.64□□□□□ -0.71
Ccdc47-201ENSMUST00000002043 Bcl2l13P59017 434 aa10.64□□□□□ -0.71
Ccdc47-201ENSMUST00000002043 IkQ9Z1M8 557 aaKnown RBP10.64□□□□□ -0.71
Ccdc47-201ENSMUST00000002043 Limch1Q3UH68 1057 aa10.64□□□□□ -0.71
Ccdc47-201ENSMUST00000002043 Dydc1Q9D9T0 175 aa10.64□□□□□ -0.71
Ccdc47-201ENSMUST00000002043 Mybbp1aQ7TPV4 1344 aaKnown RBP10.64□□□□□ -0.71
Ccdc47-201ENSMUST00000002043 Fbf1A2A870 1173 aa10.63□□□□□ -0.71
Ccdc47-201ENSMUST00000002043 Ppp1r15aP17564 657 aa10.63□□□□□ -0.71
Ccdc47-201ENSMUST00000002043 Hdgfl1Q2VPR5 283 aa10.63□□□□□ -0.71
Ccdc47-201ENSMUST00000002043 Fgd6Q69ZL1 1399 aa10.63□□□□□ -0.71
Ccdc47-201ENSMUST00000002043 Api5O35841 504 aaKnown RBP10.63□□□□□ -0.71
Ccdc47-201ENSMUST00000002043 Wdhd1P59328 1117 aa10.63□□□□□ -0.71
Ccdc47-201ENSMUST00000002043 TmpoQ61033 693 aaKnown RBP10.63□□□□□ -0.71
Ccdc47-201ENSMUST00000002043 Cep55Q8BT07 462 aa10.63□□□□□ -0.71
Ccdc47-201ENSMUST00000002043 Gm42641I6L9G2 585 aa10.63□□□□□ -0.71
Ccdc47-201ENSMUST00000002043 Hspa4Q61316 841 aa10.63□□□□□ -0.71
Ccdc47-201ENSMUST00000002043 Ccdc93Q7TQK5 629 aa10.63□□□□□ -0.71
Ccdc47-201ENSMUST00000002043 AtripQ8BMG1 785 aa10.63□□□□□ -0.71
Ccdc47-201ENSMUST00000002043 Hmg20bQ9Z104 317 aa10.63□□□□□ -0.71
Ccdc47-201ENSMUST00000002043 Kdm3aQ6PCM1 1323 aa10.63□□□□□ -0.71
Ccdc47-201ENSMUST00000002043 Gm21698A0A087WQP8 267 aa10.62□□□□□ -0.71
Ccdc47-201ENSMUST00000002043 Gas2l3Q3UWW6 683 aa10.62□□□□□ -0.71
Ccdc47-201ENSMUST00000002043 Gm45140A0A0N4SUM8 220 aa10.62□□□□□ -0.71
Ccdc47-201ENSMUST00000002043 Txndc16Q7TN22 820 aa10.62□□□□□ -0.71
Ccdc47-201ENSMUST00000002043 Tmc2Q8R4P4 888 aa10.62□□□□□ -0.71
Ccdc47-201ENSMUST00000002043 Ktn1Q61595 1327 aaKnown RBP10.62□□□□□ -0.71
Ccdc47-201ENSMUST00000002043 Arhgap5P97393 1501 aa10.62□□□□□ -0.71
Ccdc47-201ENSMUST00000002043 Zkscan7E9PVW1 718 aa10.62□□□□□ -0.71
Ccdc47-201ENSMUST00000002043 MpripP97434 1024 aa10.62□□□□□ -0.71
Ccdc47-201ENSMUST00000002043 Gbp1Q01514 589 aa10.62□□□□□ -0.71
Ccdc47-201ENSMUST00000002043 Cdk19Q8BWD8 501 aa10.62□□□□□ -0.71
Ccdc47-201ENSMUST00000002043 TimelessQ9R1X4 1197 aa10.62□□□□□ -0.71
Ccdc47-201ENSMUST00000002043 Prr29B1ARI9 187 aa10.62□□□□□ -0.71
Ccdc47-201ENSMUST00000002043 Pde4dQ01063 747 aa10.62□□□□□ -0.71
Ccdc47-201ENSMUST00000002043 Traf3ip1Q149C2 625 aa10.62□□□□□ -0.71
Ccdc47-201ENSMUST00000002043 Ddx58Q6Q899 926 aa10.62□□□□□ -0.71
Ccdc47-201ENSMUST00000002043 Rbm10Q99KG3 930 aaKnown RBP10.62□□□□□ -0.71
Ccdc47-201ENSMUST00000002043 Ssr1Q9CY50 286 aaKnown RBP10.62□□□□□ -0.71
Ccdc47-201ENSMUST00000002043 Igbp1bQ9QZ29 343 aa10.62□□□□□ -0.71
Ccdc47-201ENSMUST00000002043 Mcm4P49717 862 aa10.61□□□□□ -0.71
Ccdc47-201ENSMUST00000002043 ZwintQ9CQU5 252 aa10.61□□□□□ -0.71
Ccdc47-201ENSMUST00000002043 Gm21680A0A0G2JGR8 267 aa10.61□□□□□ -0.71
Ccdc47-201ENSMUST00000002043 Kcnj4P52189 445 aa10.61□□□□□ -0.71
Ccdc47-201ENSMUST00000002043 Cdan1Q8CC12 1239 aa10.61□□□□□ -0.71
Ccdc47-201ENSMUST00000002043 Nlrp3Q8R4B8 1033 aa10.61□□□□□ -0.71
Ccdc47-201ENSMUST00000002043 Nf2P46662 596 aa10.61□□□□□ -0.71
Ccdc47-201ENSMUST00000002043 LyarQ08288 388 aaKnown RBP10.61□□□□□ -0.71
Ccdc47-201ENSMUST00000002043 Uri1Q3TLD5 531 aa10.61□□□□□ -0.71
Ccdc47-201ENSMUST00000002043 Fkbp5Q64378 456 aa10.61□□□□□ -0.71
Ccdc47-201ENSMUST00000002043 Uchl5Q9WUP7 329 aa10.61□□□□□ -0.71
Ccdc47-201ENSMUST00000002043 Nucb2P81117 420 aa10.61□□□□□ -0.71
Ccdc47-201ENSMUST00000002043 Ttc19Q8CC21 365 aa10.61□□□□□ -0.71
Ccdc47-201ENSMUST00000002043 Galntl5Q9D4M9 431 aa10.61□□□□□ -0.71
Retrieved 100 of 22,080 RNA–protein pairs in 23.5 ms