RNA–Protein interactions for RNA: ENSMUST00000001547.7

Col1a1-201, Transcript of Collagen alpha-1(I) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col1a1, Length 5,930 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1-201ENSMUST00000001547 TnmdQ9EP64 317 aa16.59■□□□□ 0.25
Col1a1-201ENSMUST00000001547 Smc5Q8CG46 1101 aaKnown RBP16.58■□□□□ 0.25
Col1a1-201ENSMUST00000001547 Krt85Q9Z2T6 507 aa16.58■□□□□ 0.25
Col1a1-201ENSMUST00000001547 Cep57l1Q8VDS7 400 aa16.58■□□□□ 0.25
Col1a1-201ENSMUST00000001547 Tmco3Q8BH01 678 aa16.58■□□□□ 0.24
Col1a1-201ENSMUST00000001547 Rbm10Q99KG3 930 aaKnown RBP16.58■□□□□ 0.24
Col1a1-201ENSMUST00000001547 Prkar2bP31324 416 aa16.58■□□□□ 0.24
Col1a1-201ENSMUST00000001547 Spty2d1Q68FG3 682 aa16.58■□□□□ 0.24
Col1a1-201ENSMUST00000001547 Ccar2Q8VDP4 922 aaKnown RBP16.58■□□□□ 0.24
Col1a1-201ENSMUST00000001547 Olfml1Q8BSH2 233 aa16.57■□□□□ 0.24
Col1a1-201ENSMUST00000001547 Ppp1r42Q8R1Z4 357 aa16.57■□□□□ 0.24
Col1a1-201ENSMUST00000001547 Erc1Q99MI1 1120 aa16.57■□□□□ 0.24
Col1a1-201ENSMUST00000001547 Rrs1Q9CYH6 365 aaKnown RBP16.57■□□□□ 0.24
Col1a1-201ENSMUST00000001547 Klf15Q9EPW2 415 aa16.57■□□□□ 0.24
Col1a1-201ENSMUST00000001547 Prpf4bQ61136 1007 aaKnown RBP16.57■□□□□ 0.24
Col1a1-201ENSMUST00000001547 3425401B19RikD3Z1D3 1412 aa16.57■□□□□ 0.24
Col1a1-201ENSMUST00000001547 Hs1bp3Q3TC93 395 aa16.57■□□□□ 0.24
Col1a1-201ENSMUST00000001547 CastP51125 788 aa16.56■□□□□ 0.24
Col1a1-201ENSMUST00000001547 Fsd2Q8BZ52 692 aa16.56■□□□□ 0.24
Col1a1-201ENSMUST00000001547 Slc26a8Q8R0C3 999 aa16.56■□□□□ 0.24
Col1a1-201ENSMUST00000001547 ScaperF8VQ70 1398 aaKnown RBP16.56■□□□□ 0.24
Col1a1-201ENSMUST00000001547 Mum1Q6DID5 682 aa16.56■□□□□ 0.24
Col1a1-201ENSMUST00000001547 Cdc45Q9Z1X9 566 aa16.56■□□□□ 0.24
Col1a1-201ENSMUST00000001547 Irgm2A0A140LIF8 407 aa16.56■□□□□ 0.24
Col1a1-201ENSMUST00000001547 GnpatP98192 678 aa16.56■□□□□ 0.24
Col1a1-201ENSMUST00000001547 Krt84Q99M73 603 aa16.56■□□□□ 0.24
Col1a1-201ENSMUST00000001547 Nop14Q8R3N1 860 aaKnown RBP16.56■□□□□ 0.24
Col1a1-201ENSMUST00000001547 Nlrp3Q8R4B8 1033 aa16.56■□□□□ 0.24
Col1a1-201ENSMUST00000001547 Pms1Q8K119 917 aa16.55■□□□□ 0.24
Col1a1-201ENSMUST00000001547 NgdnQ9DB96 315 aaKnown RBP16.55■□□□□ 0.24
Col1a1-201ENSMUST00000001547 Pde4bB1AWC9 736 aa16.55■□□□□ 0.24
Col1a1-201ENSMUST00000001547 Ppp6r1Q7TSI3 856 aa16.55■□□□□ 0.24
Col1a1-201ENSMUST00000001547 Q3UPC7 1272 aa16.55■□□□□ 0.24
Col1a1-201ENSMUST00000001547 ImmtQ8CAQ8 757 aaKnown RBP16.55■□□□□ 0.24
Col1a1-201ENSMUST00000001547 Cdkl5Q3UTQ8 938 aa16.54■□□□□ 0.24
Col1a1-201ENSMUST00000001547 NinlQ6ZQ12 1394 aa16.54■□□□□ 0.24
Col1a1-201ENSMUST00000001547 Ccdc96Q9CR92 584 aa16.54■□□□□ 0.24
Col1a1-201ENSMUST00000001547 SelenooQ9DBC0 667 aa16.54■□□□□ 0.24
Col1a1-201ENSMUST00000001547 Mctp1E9PV86 951 aa16.54■□□□□ 0.24
Col1a1-201ENSMUST00000001547 Dnajc2P54103 621 aaKnown RBP16.54■□□□□ 0.24
Col1a1-201ENSMUST00000001547 Gps2Q921N8 327 aa16.54■□□□□ 0.24
Col1a1-201ENSMUST00000001547 AidaQ8C4Q6 305 aa16.53■□□□□ 0.24
Col1a1-201ENSMUST00000001547 WizO88286 1684 aaKnown RBP16.53■□□□□ 0.24
Col1a1-201ENSMUST00000001547 NefhP19246 1090 aa16.53■□□□□ 0.24
Col1a1-201ENSMUST00000001547 Nup88Q8CEC0 753 aaKnown RBP16.53■□□□□ 0.24
Col1a1-201ENSMUST00000001547 Mrvi1Q9WUX5 899 aaKnown RBP16.53■□□□□ 0.24
Col1a1-201ENSMUST00000001547 Slc5a1Q8C3K6 665 aa16.53■□□□□ 0.24
Col1a1-201ENSMUST00000001547 Cep89Q9CZX2 791 aa16.53■□□□□ 0.24
Col1a1-201ENSMUST00000001547 Elp1Q7TT37 1333 aaKnown RBP16.53■□□□□ 0.24
Col1a1-201ENSMUST00000001547 Mcm10Q0VBD2 885 aa16.52■□□□□ 0.24
Col1a1-201ENSMUST00000001547 AcrbpQ3V140 540 aa16.52■□□□□ 0.24
Col1a1-201ENSMUST00000001547 GpkowQ56A08 488 aa16.52■□□□□ 0.24
Col1a1-201ENSMUST00000001547 Cfap69Q8BH53 942 aa16.52■□□□□ 0.24
Col1a1-201ENSMUST00000001547 Nol11Q8BJW5 723 aaKnown RBP16.52■□□□□ 0.24
Col1a1-201ENSMUST00000001547 Rufy2Q8R4C2 606 aa16.52■□□□□ 0.24
Col1a1-201ENSMUST00000001547 Riok1Q922Q2 567 aa16.52■□□□□ 0.24
Col1a1-201ENSMUST00000001547 Kdm5bQ80Y84 1544 aa16.52■□□□□ 0.24
Col1a1-201ENSMUST00000001547 Zscan20B2KFW1 1030 aa16.52■□□□□ 0.24
Col1a1-201ENSMUST00000001547 IkQ9Z1M8 557 aaKnown RBP16.52■□□□□ 0.23
Col1a1-201ENSMUST00000001547 Cep112Q5PR68 954 aa16.52■□□□□ 0.23
Col1a1-201ENSMUST00000001547 Ccdc155Q80VJ8 648 aa16.52■□□□□ 0.23
Col1a1-201ENSMUST00000001547 Med4Q9CQA5 270 aa16.52■□□□□ 0.23
Col1a1-201ENSMUST00000001547 Fam13aQ8BGI4 693 aa16.51■□□□□ 0.23
Col1a1-201ENSMUST00000001547 Zmym4A2A791 1549 aaKnown RBP16.51■□□□□ 0.23
Col1a1-201ENSMUST00000001547 Bicdl1A0JNT9 577 aa16.51■□□□□ 0.23
Col1a1-201ENSMUST00000001547 Strn4P58404 760 aa16.51■□□□□ 0.23
Col1a1-201ENSMUST00000001547 Gbp4Q61107 620 aa16.51■□□□□ 0.23
Col1a1-201ENSMUST00000001547 Kif20aP97329 887 aa16.5■□□□□ 0.23
Col1a1-201ENSMUST00000001547 Trim55G3X8Y1 545 aa16.49■□□□□ 0.23
Col1a1-201ENSMUST00000001547 TimelessQ9R1X4 1197 aa16.49■□□□□ 0.23
Col1a1-201ENSMUST00000001547 Cyb5rlB1AS42 316 aa16.49■□□□□ 0.23
Col1a1-201ENSMUST00000001547 Gjb2Q00977 226 aa16.49■□□□□ 0.23
Col1a1-201ENSMUST00000001547 Cpa2Q504N0 417 aa16.49■□□□□ 0.23
Col1a1-201ENSMUST00000001547 EappQ5BU09 281 aa16.49■□□□□ 0.23
Col1a1-201ENSMUST00000001547 Pof1bQ8K4L4 587 aa16.49■□□□□ 0.23
Col1a1-201ENSMUST00000001547 Rrp9Q91WM3 475 aaKnown RBP16.49■□□□□ 0.23
Col1a1-201ENSMUST00000001547 Cfap58B2RW38 873 aa16.49■□□□□ 0.23
Col1a1-201ENSMUST00000001547 Erich4Q3UNU4 136 aa16.49■□□□□ 0.23
Col1a1-201ENSMUST00000001547 Erlin2Q8BFZ9 340 aa16.49■□□□□ 0.23
Col1a1-201ENSMUST00000001547 Samm50Q8BGH2 469 aa16.49■□□□□ 0.23
Col1a1-201ENSMUST00000001547 Bag3Q9JLV1 577 aaKnown RBP16.49■□□□□ 0.23
Col1a1-201ENSMUST00000001547 Kank1E9Q238 1360 aa16.49■□□□□ 0.23
Col1a1-201ENSMUST00000001547 Samd9lQ69Z37 1561 aa16.49■□□□□ 0.23
Col1a1-201ENSMUST00000001547 Tango6Q8C3S2 1079 aa16.49■□□□□ 0.23
Col1a1-201ENSMUST00000001547 Fez1Q8K0X8 392 aa16.49■□□□□ 0.23
Col1a1-201ENSMUST00000001547 Kiaa0753Q6A000 959 aa16.49■□□□□ 0.23
Col1a1-201ENSMUST00000001547 Sugp2Q8CH09 1067 aa16.49■□□□□ 0.23
Col1a1-201ENSMUST00000001547 Acsbg1Q99PU5 721 aa16.49■□□□□ 0.23
Col1a1-201ENSMUST00000001547 Cyp26c1B2RXA7 518 aa16.48■□□□□ 0.23
Col1a1-201ENSMUST00000001547 Trim30cD3YVI9 513 aa16.48■□□□□ 0.23
Col1a1-201ENSMUST00000001547 Ncbp1Q3UYV9 790 aaKnown RBP16.48■□□□□ 0.23
Col1a1-201ENSMUST00000001547 CenphQ9QYM8 241 aa16.48■□□□□ 0.23
Col1a1-201ENSMUST00000001547 Trappc8E9PWG2 1437 aa16.48■□□□□ 0.23
Col1a1-201ENSMUST00000001547 Aplp1Q03157 653 aa16.48■□□□□ 0.23
Col1a1-201ENSMUST00000001547 Mex3cQ05A36 652 aaKnown RBP16.48■□□□□ 0.23
Col1a1-201ENSMUST00000001547 Chpf2Q3UU43 768 aa16.48■□□□□ 0.23
Col1a1-201ENSMUST00000001547 Dnajc5bQ9CQ94 199 aa16.48■□□□□ 0.23
Col1a1-201ENSMUST00000001547 PxdnQ3UQ28 1475 aa16.48■□□□□ 0.23
Col1a1-201ENSMUST00000001547 Pik3r4Q8VD65 1358 aa16.48■□□□□ 0.23
Col1a1-201ENSMUST00000001547 Prex2Q3LAC4 1598 aa16.48■□□□□ 0.23
Retrieved 100 of 22,080 RNA–protein pairs in 51 ms