RNA–Protein interactions for RNA: ENST00000639841.1

NECAP1-220, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 1,982 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-220ENST00000639841 UBE2HP62256 183 aa7.35□□□□□ -1.23
NECAP1-220ENST00000639841 DUSP2Q05923 314 aa7.35□□□□□ -1.23
NECAP1-220ENST00000639841 GOLGA8FQ08AF8 430 aa7.35□□□□□ -1.23
NECAP1-220ENST00000639841 DPYSQ14117 519 aa7.35□□□□□ -1.23
NECAP1-220ENST00000639841 RIPPLY2Q5TAB7 128 aa7.35□□□□□ -1.23
NECAP1-220ENST00000639841 PMS2CLQ68D20 193 aa7.35□□□□□ -1.23
NECAP1-220ENST00000639841 NEK5Q6P3R8 708 aa7.35□□□□□ -1.23
NECAP1-220ENST00000639841 SHISA2Q6UWI4 295 aa7.35□□□□□ -1.23
NECAP1-220ENST00000639841 SLC36A4Q6YBV0 504 aa7.35□□□□□ -1.23
NECAP1-220ENST00000639841 AMZ2Q86W34 360 aa7.35□□□□□ -1.23
NECAP1-220ENST00000639841 UXS1Q8NBZ7 420 aa7.35□□□□□ -1.23
NECAP1-220ENST00000639841 OCC1Q8TAD7 63 aa7.35□□□□□ -1.23
NECAP1-220ENST00000639841 ZNF671Q8TAW3 534 aa7.35□□□□□ -1.23
NECAP1-220ENST00000639841 GANCQ8TET4 914 aa7.35□□□□□ -1.23
NECAP1-220ENST00000639841 WASF1Q92558 559 aa7.35□□□□□ -1.23
NECAP1-220ENST00000639841 THRSPQ92748 146 aa7.35□□□□□ -1.23
NECAP1-220ENST00000639841 TMEM186Q96B77 213 aa7.35□□□□□ -1.23
NECAP1-220ENST00000639841 MYRFLQ96LU7 910 aa7.35□□□□□ -1.23
NECAP1-220ENST00000639841 ZNF558Q96NG5 402 aa7.35□□□□□ -1.23
NECAP1-220ENST00000639841 HAPLN3Q96S86 360 aa7.35□□□□□ -1.23
NECAP1-220ENST00000639841 RIOK1Q9BRS2 568 aaKnown RBP7.35□□□□□ -1.23
NECAP1-220ENST00000639841 CEP41Q9BYV8 373 aa7.35□□□□□ -1.23
NECAP1-220ENST00000639841 SLC28A3Q9HAS3 691 aa7.35□□□□□ -1.23
NECAP1-220ENST00000639841 PIH1D3Q9NQM4 214 aaKnown RBP7.35□□□□□ -1.23
NECAP1-220ENST00000639841 TRPC4Q9UBN4 977 aa7.35□□□□□ -1.23
NECAP1-220ENST00000639841 CNOT8Q9UFF9 292 aaKnown RBP7.35□□□□□ -1.23
NECAP1-220ENST00000639841 VAV3Q9UKW4 847 aa7.35□□□□□ -1.23
NECAP1-220ENST00000639841 GRID1Q9ULK0 1009 aa7.35□□□□□ -1.23
NECAP1-220ENST00000639841 Q9Y3F1 56 aa7.35□□□□□ -1.23
NECAP1-220ENST00000639841 SEC23IPQ9Y6Y8 1000 aaKnown RBP7.35□□□□□ -1.23
NECAP1-220ENST00000639841 MKI67P46013 3256 aaKnown RBP7.35□□□□□ -1.23
NECAP1-220ENST00000639841 A0A1W2PRG0 241 aa7.35□□□□□ -1.23
NECAP1-220ENST00000639841 ZC3H12DA2A288 527 aaKnown RBP7.35□□□□□ -1.23
NECAP1-220ENST00000639841 ZSCAN5BA6NJL1 495 aa7.35□□□□□ -1.23
NECAP1-220ENST00000639841 TBKBP1A7MCY6 615 aa7.35□□□□□ -1.23
NECAP1-220ENST00000639841 BIN1O00499 593 aa7.35□□□□□ -1.23
NECAP1-220ENST00000639841 ZC3H11AO75152 810 aaKnown RBP eCLIP7.35□□□□□ -1.23
NECAP1-220ENST00000639841 USP12O75317 370 aa7.35□□□□□ -1.23
NECAP1-220ENST00000639841 AK1P00568 194 aa7.35□□□□□ -1.23
NECAP1-220ENST00000639841 SKILP12757 684 aa7.35□□□□□ -1.23
NECAP1-220ENST00000639841 MMP9P14780 707 aa7.35□□□□□ -1.23
NECAP1-220ENST00000639841 SP100P23497 879 aaPredicted RBP7.35□□□□□ -1.23
NECAP1-220ENST00000639841 SFNP31947 248 aa7.35□□□□□ -1.23
NECAP1-220ENST00000639841 GSTM5P46439 218 aa7.35□□□□□ -1.23
NECAP1-220ENST00000639841 PCP4P48539 62 aa7.35□□□□□ -1.23
NECAP1-220ENST00000639841 ETV1P50549 477 aa7.35□□□□□ -1.23
NECAP1-220ENST00000639841 CLCN7P51798 805 aa7.35□□□□□ -1.23
NECAP1-220ENST00000639841 GALCP54803 685 aa7.35□□□□□ -1.23
NECAP1-220ENST00000639841 UCP2P55851 309 aa7.35□□□□□ -1.23
NECAP1-220ENST00000639841 YWHAZP63104 245 aaKnown RBP7.35□□□□□ -1.23
NECAP1-220ENST00000639841 DYNLL1P63167 89 aaKnown RBP7.35□□□□□ -1.23
NECAP1-220ENST00000639841 PKN1Q16512 942 aa7.35□□□□□ -1.23
NECAP1-220ENST00000639841 NOMO2Q5JPE7 1267 aa7.35□□□□□ -1.23
NECAP1-220ENST00000639841 DNTTIP2Q5QJE6 756 aaKnown RBP7.35□□□□□ -1.23
NECAP1-220ENST00000639841 DAB2IPQ5VWQ8 1189 aa7.35□□□□□ -1.23
NECAP1-220ENST00000639841 PLA2G4FQ68DD2 849 aa7.35□□□□□ -1.23
NECAP1-220ENST00000639841 PAOXQ6QHF9 649 aa7.35□□□□□ -1.23
NECAP1-220ENST00000639841 TRAPPC11Q7Z392 1133 aa7.35□□□□□ -1.23
NECAP1-220ENST00000639841 ARMC10Q8N2F6 343 aa7.35□□□□□ -1.23
NECAP1-220ENST00000639841 ZCCHC7Q8N3Z6 543 aaKnown RBP7.35□□□□□ -1.23
NECAP1-220ENST00000639841 GUF1Q8N442 669 aaKnown RBP7.35□□□□□ -1.23
NECAP1-220ENST00000639841 GPR161Q8N6U8 529 aaKnown RBP7.35□□□□□ -1.23
NECAP1-220ENST00000639841 C11orf44Q8N8P7 122 aa7.35□□□□□ -1.23
NECAP1-220ENST00000639841 CFAP61Q8NHU2 1237 aa7.35□□□□□ -1.23
NECAP1-220ENST00000639841 C17orf80Q9BSJ5 609 aa7.35□□□□□ -1.23
NECAP1-220ENST00000639841 CARD6Q9BX69 1037 aa7.35□□□□□ -1.23
NECAP1-220ENST00000639841 PALMDQ9NP74 551 aa7.35□□□□□ -1.23
NECAP1-220ENST00000639841 SLC22A11Q9NSA0 550 aa7.35□□□□□ -1.23
NECAP1-220ENST00000639841 ARL8BQ9NVJ2 186 aa7.35□□□□□ -1.23
NECAP1-220ENST00000639841 SMPD3Q9NY59 655 aaPredicted RBP7.35□□□□□ -1.23
NECAP1-220ENST00000639841 ARPP21Q9UBL0 812 aaPredicted RBP7.35□□□□□ -1.23
NECAP1-220ENST00000639841 DBNLQ9UJU6 430 aaKnown RBP7.35□□□□□ -1.23
NECAP1-220ENST00000639841 GMEB2Q9UKD1 530 aa7.35□□□□□ -1.23
NECAP1-220ENST00000639841 A0A1W2PQJ5 194 aa7.34□□□□□ -1.23
NECAP1-220ENST00000639841 ELOVL7A1L3X0 281 aa7.34□□□□□ -1.23
NECAP1-220ENST00000639841 CDHR4A6H8M9 788 aa7.34□□□□□ -1.23
NECAP1-220ENST00000639841 TCAF2A6NFQ2 919 aa7.34□□□□□ -1.23
NECAP1-220ENST00000639841 ASB14A6NK59 587 aa7.34□□□□□ -1.23
NECAP1-220ENST00000639841 C17orf100A8MU93 164 aa7.34□□□□□ -1.23
NECAP1-220ENST00000639841 L7N2F9 121 aa7.34□□□□□ -1.23
NECAP1-220ENST00000639841 EIF3DO15371 548 aaKnown RBP eCLIP7.34□□□□□ -1.23
NECAP1-220ENST00000639841 MT-ATP6P00846 226 aa7.34□□□□□ -1.23
NECAP1-220ENST00000639841 FGBP02675 491 aa7.34□□□□□ -1.23
NECAP1-220ENST00000639841 SRPRAP08240 638 aaKnown RBP7.34□□□□□ -1.23
NECAP1-220ENST00000639841 HOXB4P17483 251 aaPredicted RBP7.34□□□□□ -1.23
NECAP1-220ENST00000639841 UQCRC1P31930 480 aa7.34□□□□□ -1.23
NECAP1-220ENST00000639841 CCR1P32246 355 aa7.34□□□□□ -1.23
NECAP1-220ENST00000639841 CTNNB1P35222 781 aa7.34□□□□□ -1.23
NECAP1-220ENST00000639841 CLCNKAP51800 687 aa7.34□□□□□ -1.23
NECAP1-220ENST00000639841 PRKAG1P54619 331 aa7.34□□□□□ -1.23
NECAP1-220ENST00000639841 MZT1Q08AG7 82 aa7.34□□□□□ -1.23
NECAP1-220ENST00000639841 KLF10Q13118 480 aa7.34□□□□□ -1.23
NECAP1-220ENST00000639841 RAPSNQ13702 412 aa7.34□□□□□ -1.23
NECAP1-220ENST00000639841 C6orf136Q5SQH8 315 aa7.34□□□□□ -1.23
NECAP1-220ENST00000639841 ZNF648Q5T619 568 aaPredicted RBP7.34□□□□□ -1.23
NECAP1-220ENST00000639841 FAM91A1Q658Y4 838 aa7.34□□□□□ -1.23
NECAP1-220ENST00000639841 SLC9A4Q6AI14 798 aa7.34□□□□□ -1.23
NECAP1-220ENST00000639841 CLYBLQ8N0X4 340 aa7.34□□□□□ -1.23
NECAP1-220ENST00000639841 SPARTQ8N0X7 666 aa7.34□□□□□ -1.23
NECAP1-220ENST00000639841 METTL25Q8N6Q8 603 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms