RNA–Protein interactions for RNA: ENST00000636314.1

CLN6-214, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 442 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-214ENST00000636314 BPIP17213 487 aa18.19■□□□□ 0.5
CLN6-214ENST00000636314 HLA-DPA1P20036 260 aa18.19■□□□□ 0.5
CLN6-214ENST00000636314 CHRNA4P43681 627 aa18.19■□□□□ 0.5
CLN6-214ENST00000636314 INHBCP55103 352 aa18.19■□□□□ 0.5
CLN6-214ENST00000636314 NFATC3Q12968 1075 aa18.19■□□□□ 0.5
CLN6-214ENST00000636314 MAP9Q49MG5 647 aa18.19■□□□□ 0.5
CLN6-214ENST00000636314 SIRPB2Q5JXA9 342 aa18.19■□□□□ 0.5
CLN6-214ENST00000636314 AADACL2Q6P093 401 aa18.19■□□□□ 0.5
CLN6-214ENST00000636314 CHST15Q7LFX5 561 aaPredicted RBP18.19■□□□□ 0.5
CLN6-214ENST00000636314 PHYKPLQ8IUZ5 450 aa18.19■□□□□ 0.5
CLN6-214ENST00000636314 NAGSQ8N159 534 aa18.19■□□□□ 0.5
CLN6-214ENST00000636314 FBXO39Q8N4B4 442 aa18.19■□□□□ 0.5
CLN6-214ENST00000636314 LIN37Q96GY3 246 aaPredicted RBP18.19■□□□□ 0.5
CLN6-214ENST00000636314 MRGPRX2Q96LB1 330 aa18.19■□□□□ 0.5
CLN6-214ENST00000636314 FAM118BQ9BPY3 351 aa18.19■□□□□ 0.5
CLN6-214ENST00000636314 FOXP3Q9BZS1 431 aa18.19■□□□□ 0.5
CLN6-214ENST00000636314 STRADBQ9C0K7 418 aa18.19■□□□□ 0.5
CLN6-214ENST00000636314 TRABDQ9H4I3 376 aa18.19■□□□□ 0.5
CLN6-214ENST00000636314 ATXN7L1Q9ULK2 861 aaPredicted RBP18.19■□□□□ 0.5
CLN6-214ENST00000636314 PRKAB1Q9Y478 270 aa18.19■□□□□ 0.5
CLN6-214ENST00000636314 BOD1L1Q8NFC6 3051 aa18.19■□□□□ 0.5
CLN6-214ENST00000636314 A0A0U1RQJ8 604 aa18.18■□□□□ 0.5
CLN6-214ENST00000636314 PLD2O14939 933 aa18.18■□□□□ 0.5
CLN6-214ENST00000636314 AURKAO14965 403 aa18.18■□□□□ 0.5
CLN6-214ENST00000636314 ZW10O43264 779 aa18.18■□□□□ 0.5
CLN6-214ENST00000636314 FTCDO95954 541 aa18.18■□□□□ 0.5
CLN6-214ENST00000636314 ACP5P13686 325 aa18.18■□□□□ 0.5
CLN6-214ENST00000636314 GEMP55040 296 aa18.18■□□□□ 0.5
CLN6-214ENST00000636314 SLC1A5Q15758 541 aa18.18■□□□□ 0.5
CLN6-214ENST00000636314 DARS2Q6PI48 645 aaKnown RBP18.18■□□□□ 0.5
CLN6-214ENST00000636314 ZNF438Q7Z4V0 828 aa18.18■□□□□ 0.5
CLN6-214ENST00000636314 BLOC1S5Q8TDH9 187 aa18.18■□□□□ 0.5
CLN6-214ENST00000636314 GLYATL1Q969I3 302 aa18.18■□□□□ 0.5
CLN6-214ENST00000636314 PLEKHG4BQ96PX9 1271 aa18.18■□□□□ 0.5
CLN6-214ENST00000636314 CARD9Q9H257 536 aa18.18■□□□□ 0.5
CLN6-214ENST00000636314 BPIFA1Q9NP55 256 aa18.18■□□□□ 0.5
CLN6-214ENST00000636314 ARFGAP3Q9NP61 516 aa18.18■□□□□ 0.5
CLN6-214ENST00000636314 HACD3Q9P035 362 aa18.18■□□□□ 0.5
CLN6-214ENST00000636314 ATXN10Q9UBB4 475 aa18.18■□□□□ 0.5
CLN6-214ENST00000636314 PACSIN2Q9UNF0 486 aaPredicted RBP18.18■□□□□ 0.5
CLN6-214ENST00000636314 PCYT1BQ9Y5K3 369 aaPredicted RBP18.18■□□□□ 0.5
CLN6-214ENST00000636314 GOLGA6L9A6NEM1 432 aa18.17■□□□□ 0.5
CLN6-214ENST00000636314 KCNN4O15554 427 aa18.17■□□□□ 0.5
CLN6-214ENST00000636314 GRID2O43424 1007 aa18.17■□□□□ 0.5
CLN6-214ENST00000636314 NUAK1O60285 661 aa18.17■□□□□ 0.5
CLN6-214ENST00000636314 ANXA9O76027 345 aa18.17■□□□□ 0.5
CLN6-214ENST00000636314 ALDH4A1P30038 563 aa18.17■□□□□ 0.5
CLN6-214ENST00000636314 SLC5A2P31639 672 aa18.17■□□□□ 0.5
CLN6-214ENST00000636314 CCKBRP32239 447 aa18.17■□□□□ 0.5
CLN6-214ENST00000636314 HMGCLP35914 325 aa18.17■□□□□ 0.5
CLN6-214ENST00000636314 GSDMDP57764 484 aa18.17■□□□□ 0.5
CLN6-214ENST00000636314 EIF3IQ13347 325 aaKnown RBP18.17■□□□□ 0.5
CLN6-214ENST00000636314 NR1D2Q14995 579 aa18.17■□□□□ 0.5
CLN6-214ENST00000636314 AMZ1Q400G9 498 aa18.17■□□□□ 0.5
CLN6-214ENST00000636314 USP53Q70EK8 1073 aa18.17■□□□□ 0.5
CLN6-214ENST00000636314 RAB11FIP2Q7L804 512 aa18.17■□□□□ 0.5
CLN6-214ENST00000636314 GLT6D1Q7Z4J2 308 aa18.17■□□□□ 0.5
CLN6-214ENST00000636314 EXD3Q8N9H8 876 aa18.17■□□□□ 0.5
CLN6-214ENST00000636314 ARHGAP9Q9BRR9 750 aa18.17■□□□□ 0.5
CLN6-214ENST00000636314 TRIM4Q9C037 500 aa18.17■□□□□ 0.5
CLN6-214ENST00000636314 OR2AG1Q9H205 316 aa18.17■□□□□ 0.5
CLN6-214ENST00000636314 KCNK6Q9Y257 313 aa18.17■□□□□ 0.5
CLN6-214ENST00000636314 CAPN6Q9Y6Q1 641 aa18.17■□□□□ 0.5
CLN6-214ENST00000636314 HECTD1Q9ULT8 2610 aa18.16■□□□□ 0.5
CLN6-214ENST00000636314 GPR89AB7ZAQ6 455 aa18.16■□□□□ 0.5
CLN6-214ENST00000636314 EFSO43281 561 aa18.16■□□□□ 0.5
CLN6-214ENST00000636314 ZNF189O75820 626 aaPredicted RBP18.16■□□□□ 0.5
CLN6-214ENST00000636314 GPR89BP0CG08 455 aa18.16■□□□□ 0.5
CLN6-214ENST00000636314 ZNF8P17098 575 aaPredicted RBP18.16■□□□□ 0.5
CLN6-214ENST00000636314 UGT1A5P35504 534 aa18.16■□□□□ 0.5
CLN6-214ENST00000636314 OR1D5P58170 312 aa18.16■□□□□ 0.5
CLN6-214ENST00000636314 B4GALNT1Q00973 533 aa18.16■□□□□ 0.5
CLN6-214ENST00000636314 PRPSAP1Q14558 356 aa18.16■□□□□ 0.5
CLN6-214ENST00000636314 ANKRD20A2Q5SQ80 823 aa18.16■□□□□ 0.5
CLN6-214ENST00000636314 ZNF648Q5T619 568 aaPredicted RBP18.16■□□□□ 0.5
CLN6-214ENST00000636314 ANKRD20A1Q5TYW2 823 aa18.16■□□□□ 0.5
CLN6-214ENST00000636314 ANKRD20A3Q5VUR7 823 aa18.16■□□□□ 0.5
CLN6-214ENST00000636314 ZDHHC20Q5W0Z9 365 aa18.16■□□□□ 0.5
CLN6-214ENST00000636314 TTC30BQ8N4P2 665 aa18.16■□□□□ 0.5
CLN6-214ENST00000636314 SLC37A2Q8TED4 501 aa18.16■□□□□ 0.5
CLN6-214ENST00000636314 FICDQ9BVA6 458 aa18.16■□□□□ 0.5
CLN6-214ENST00000636314 TRIM39Q9HCM9 518 aa18.16■□□□□ 0.5
CLN6-214ENST00000636314 CPNE6O95741 557 aa18.15■□□□□ 0.5
CLN6-214ENST00000636314 HGFP14210 728 aa18.15■□□□□ 0.5
CLN6-214ENST00000636314 PSMB4P28070 264 aa18.15■□□□□ 0.5
CLN6-214ENST00000636314 SPAM1P38567 509 aa18.15■□□□□ 0.5
CLN6-214ENST00000636314 GPR3P46089 330 aa18.15■□□□□ 0.5
CLN6-214ENST00000636314 SRSF6Q13247 344 aaKnown RBP18.15■□□□□ 0.5
CLN6-214ENST00000636314 TGIF1Q15583 401 aa18.15■□□□□ 0.5
CLN6-214ENST00000636314 PHF19Q5T6S3 580 aa18.15■□□□□ 0.5
CLN6-214ENST00000636314 CRTC3Q6UUV7 619 aa18.15■□□□□ 0.5
CLN6-214ENST00000636314 ADGRG6Q86SQ4 1221 aa18.15■□□□□ 0.5
CLN6-214ENST00000636314 PIM3Q86V86 326 aa18.15■□□□□ 0.5
CLN6-214ENST00000636314 SFRP1Q8N474 314 aa18.15■□□□□ 0.5
CLN6-214ENST00000636314 TTC13Q8NBP0 860 aa18.15■□□□□ 0.5
CLN6-214ENST00000636314 SGF29Q96ES7 293 aa18.15■□□□□ 0.5
CLN6-214ENST00000636314 SPATA13Q96N96 652 aa18.15■□□□□ 0.5
CLN6-214ENST00000636314 VPS35Q96QK1 796 aa18.15■□□□□ 0.5
CLN6-214ENST00000636314 GORASP1Q9BQQ3 440 aa18.15■□□□□ 0.5
CLN6-214ENST00000636314 TSGA10Q9BZW7 698 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms