RNA–Protein interactions for RNA: ENST00000592388.1

VAT1-209, Transcript of vesicle amine transport 1, humanhuman

TSL 5

Gene VAT1, Length 478 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-209ENST00000592388 PIKFYVEQ9Y2I7 2098 aa7.34□□□□□ -1.23
VAT1-209ENST00000592388 NBEAL1Q6ZS30 2694 aa7.34□□□□□ -1.24
VAT1-209ENST00000592388 F5H423 210 aaPredicted RBP7.33□□□□□ -1.24
VAT1-209ENST00000592388 POLR1CO15160 346 aaPredicted RBP7.33□□□□□ -1.24
VAT1-209ENST00000592388 ZW10O43264 779 aa7.33□□□□□ -1.24
VAT1-209ENST00000592388 HTRA2O43464 458 aaPredicted RBP7.33□□□□□ -1.24
VAT1-209ENST00000592388 MAFKO60675 156 aa7.33□□□□□ -1.24
VAT1-209ENST00000592388 SOCS5O75159 536 aa7.33□□□□□ -1.24
VAT1-209ENST00000592388 PGLSO95336 258 aa7.33□□□□□ -1.24
VAT1-209ENST00000592388 SOD1P00441 154 aa7.33□□□□□ -1.24
VAT1-209ENST00000592388 PDHA1P08559 390 aa7.33□□□□□ -1.24
VAT1-209ENST00000592388 MYCLP1P12525 358 aaPredicted RBP7.33□□□□□ -1.24
VAT1-209ENST00000592388 GZMAP12544 262 aa7.33□□□□□ -1.24
VAT1-209ENST00000592388 CAPN3P20807 821 aa7.33□□□□□ -1.24
VAT1-209ENST00000592388 HTR1EP28566 365 aa7.33□□□□□ -1.24
VAT1-209ENST00000592388 SSTR2P30874 369 aa7.33□□□□□ -1.24
VAT1-209ENST00000592388 CASP14P31944 242 aa7.33□□□□□ -1.24
VAT1-209ENST00000592388 VIPR1P32241 457 aa7.33□□□□□ -1.24
VAT1-209ENST00000592388 TRIM23P36406 574 aa7.33□□□□□ -1.24
VAT1-209ENST00000592388 ARL4AP40617 200 aa7.33□□□□□ -1.24
VAT1-209ENST00000592388 MMP13P45452 471 aa7.33□□□□□ -1.24
VAT1-209ENST00000592388 GNPDA1P46926 289 aa7.33□□□□□ -1.24
VAT1-209ENST00000592388 POLD2P49005 469 aa7.33□□□□□ -1.24
VAT1-209ENST00000592388 ZNF165P49910 485 aa7.33□□□□□ -1.24
VAT1-209ENST00000592388 CDK3Q00526 305 aa7.33□□□□□ -1.24
VAT1-209ENST00000592388 MAP7Q14244 749 aa7.33□□□□□ -1.24
VAT1-209ENST00000592388 RFTN1Q14699 578 aaPredicted RBP7.33□□□□□ -1.24
VAT1-209ENST00000592388 IQCB1Q15051 598 aa7.33□□□□□ -1.24
VAT1-209ENST00000592388 FILIP1LQ4L180 1135 aa7.33□□□□□ -1.24
VAT1-209ENST00000592388 VWA2Q5GFL6 755 aa7.33□□□□□ -1.24
VAT1-209ENST00000592388 RAET1GQ6H3X3 334 aa7.33□□□□□ -1.24
VAT1-209ENST00000592388 PPP1R2P3Q6NXS1 205 aa7.33□□□□□ -1.24
VAT1-209ENST00000592388 TMEM71Q6P5X7 295 aa7.33□□□□□ -1.24
VAT1-209ENST00000592388 SLC30A9Q6PML9 568 aa7.33□□□□□ -1.24
VAT1-209ENST00000592388 TMCO3Q6UWJ1 677 aa7.33□□□□□ -1.24
VAT1-209ENST00000592388 C6orf15Q6UXA7 325 aaPredicted RBP7.33□□□□□ -1.24
VAT1-209ENST00000592388 Q6ZVL8 140 aa7.33□□□□□ -1.24
VAT1-209ENST00000592388 LYSMD3Q7Z3D4 306 aa7.33□□□□□ -1.24
VAT1-209ENST00000592388 ZNF761Q86XN6 746 aaPredicted RBP7.33□□□□□ -1.24
VAT1-209ENST00000592388 NRROSQ86YC3 692 aa7.33□□□□□ -1.24
VAT1-209ENST00000592388 PSTKQ8IV42 348 aaKnown RBP7.33□□□□□ -1.24
VAT1-209ENST00000592388 RHOT1Q8IXI2 618 aa7.33□□□□□ -1.24
VAT1-209ENST00000592388 GALNT6Q8NCL4 622 aa7.33□□□□□ -1.24
VAT1-209ENST00000592388 FDCSPQ8NFU4 85 aa7.33□□□□□ -1.24
VAT1-209ENST00000592388 ATL2Q8NHH9 583 aa7.33□□□□□ -1.24
VAT1-209ENST00000592388 SPATA3Q8NHX4 192 aa7.33□□□□□ -1.24
VAT1-209ENST00000592388 HDAC11Q96DB2 347 aa7.33□□□□□ -1.24
VAT1-209ENST00000592388 NUDCD1Q96RS6 583 aa7.33□□□□□ -1.24
VAT1-209ENST00000592388 NUP85Q9BW27 656 aa7.33□□□□□ -1.24
VAT1-209ENST00000592388 FRMD8Q9BZ67 464 aaPredicted RBP7.33□□□□□ -1.24
VAT1-209ENST00000592388 ULBP3Q9BZM4 244 aa7.33□□□□□ -1.24
VAT1-209ENST00000592388 NAT10Q9H0A0 1025 aaKnown RBP7.33□□□□□ -1.24
VAT1-209ENST00000592388 ISCUQ9H1K1 167 aa7.33□□□□□ -1.24
VAT1-209ENST00000592388 NT5MQ9NPB1 228 aa7.33□□□□□ -1.24
VAT1-209ENST00000592388 FBXO8Q9NRD0 319 aa7.33□□□□□ -1.24
VAT1-209ENST00000592388 SPATS2LQ9NUQ6 558 aaKnown RBP7.33□□□□□ -1.24
VAT1-209ENST00000592388 ANAPC7Q9UJX3 599 aa7.33□□□□□ -1.24
VAT1-209ENST00000592388 SUFUQ9UMX1 484 aa7.33□□□□□ -1.24
VAT1-209ENST00000592388 NEU2Q9Y3R4 380 aa7.33□□□□□ -1.24
VAT1-209ENST00000592388 PLEKHM1Q9Y4G2 1056 aa7.33□□□□□ -1.24
VAT1-209ENST00000592388 PCYT1BQ9Y5K3 369 aaPredicted RBP7.33□□□□□ -1.24
VAT1-209ENST00000592388 KLF2Q9Y5W3 355 aaPredicted RBP7.33□□□□□ -1.24
VAT1-209ENST00000592388 COPG1Q9Y678 874 aaKnown RBP7.33□□□□□ -1.24
VAT1-209ENST00000592388 DCHS2Q6V1P9 2916 aa7.33□□□□□ -1.24
VAT1-209ENST00000592388 JMJD1CQ15652 2540 aa7.33□□□□□ -1.24
VAT1-209ENST00000592388 MYO7BQ6PIF6 2116 aa7.33□□□□□ -1.24
VAT1-209ENST00000592388 MDC1Q14676 2089 aaKnown RBP7.32□□□□□ -1.24
VAT1-209ENST00000592388 PRRC2AP48634 2157 aaKnown RBP7.32□□□□□ -1.24
VAT1-209ENST00000592388 IGHV1OR21-1A0A087WYE8 117 aa7.32□□□□□ -1.24
VAT1-209ENST00000592388 A0A087X0T9 212 aa7.32□□□□□ -1.24
VAT1-209ENST00000592388 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.32□□□□□ -1.24
VAT1-209ENST00000592388 CFAP69A5D8W1 941 aa7.32□□□□□ -1.24
VAT1-209ENST00000592388 A6NL46 340 aa7.32□□□□□ -1.24
VAT1-209ENST00000592388 KIAA1324LA8MWY0 1029 aaPredicted RBP7.32□□□□□ -1.24
VAT1-209ENST00000592388 PPM1DO15297 605 aa7.32□□□□□ -1.24
VAT1-209ENST00000592388 SNRNP200O75643 2136 aaKnown RBP7.32□□□□□ -1.24
VAT1-209ENST00000592388 ECEL1O95672 775 aa7.32□□□□□ -1.24
VAT1-209ENST00000592388 SERPINC1P01008 464 aa7.32□□□□□ -1.24
VAT1-209ENST00000592388 CEACAM5P06731 702 aa7.32□□□□□ -1.24
VAT1-209ENST00000592388 FAM228BP0C875 321 aa7.32□□□□□ -1.24
VAT1-209ENST00000592388 MYBL1P10243 752 aa7.32□□□□□ -1.24
VAT1-209ENST00000592388 SPTBP11277 2137 aa7.32□□□□□ -1.24
VAT1-209ENST00000592388 CCNB1P14635 433 aa7.32□□□□□ -1.24
VAT1-209ENST00000592388 FECHP22830 423 aa7.32□□□□□ -1.24
VAT1-209ENST00000592388 KELP23276 732 aa7.32□□□□□ -1.24
VAT1-209ENST00000592388 PCK1P35558 622 aa7.32□□□□□ -1.24
VAT1-209ENST00000592388 HCAR3P49019 387 aa7.32□□□□□ -1.24
VAT1-209ENST00000592388 RENBPP51606 427 aa7.32□□□□□ -1.24
VAT1-209ENST00000592388 CDH6P55285 790 aa7.32□□□□□ -1.24
VAT1-209ENST00000592388 POLR2LP62875 67 aaKnown RBP7.32□□□□□ -1.24
VAT1-209ENST00000592388 DSC2Q02487 901 aa7.32□□□□□ -1.24
VAT1-209ENST00000592388 NSUN2Q08J23 767 aaKnown RBP eCLIP7.32□□□□□ -1.24
VAT1-209ENST00000592388 DNASE1L3Q13609 305 aa7.32□□□□□ -1.24
VAT1-209ENST00000592388 KRT81Q14533 505 aa7.32□□□□□ -1.24
VAT1-209ENST00000592388 NR1I3Q14994 352 aa7.32□□□□□ -1.24
VAT1-209ENST00000592388 NR1D2Q14995 579 aa7.32□□□□□ -1.24
VAT1-209ENST00000592388 ATP13A4Q4VNC1 1196 aa7.32□□□□□ -1.24
VAT1-209ENST00000592388 LRRC66Q68CR7 880 aa7.32□□□□□ -1.24
VAT1-209ENST00000592388 NCBP2-AS2Q69YL0 99 aa7.32□□□□□ -1.24
VAT1-209ENST00000592388 LUZP1Q86V48 1076 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms