RNA–Protein interactions for RNA: ENST00000583328.5

TOP3A-215, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 727 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-215ENST00000583328 PEBP4Q96S96 227 aa12.14□□□□□ -0.47
TOP3A-215ENST00000583328 AGPAT1Q99943 283 aa12.14□□□□□ -0.47
TOP3A-215ENST00000583328 SLC29A3Q9BZD2 475 aa12.14□□□□□ -0.47
TOP3A-215ENST00000583328 TRIM5Q9C035 493 aa12.14□□□□□ -0.47
TOP3A-215ENST00000583328 ACTL8Q9H568 366 aa12.14□□□□□ -0.47
TOP3A-215ENST00000583328 ZNF768Q9H5H4 540 aaKnown RBP12.14□□□□□ -0.47
TOP3A-215ENST00000583328 ZWILCHQ9H900 591 aa12.14□□□□□ -0.47
TOP3A-215ENST00000583328 UCK1Q9HA47 277 aa12.14□□□□□ -0.47
TOP3A-215ENST00000583328 SLAMF7Q9NQ25 335 aa12.14□□□□□ -0.47
TOP3A-215ENST00000583328 OGFRQ9NZT2 677 aa12.14□□□□□ -0.47
TOP3A-215ENST00000583328 CNOT6Q9ULM6 557 aaKnown RBP12.14□□□□□ -0.47
TOP3A-215ENST00000583328 MYO6Q9UM54 1294 aa12.14□□□□□ -0.47
TOP3A-215ENST00000583328 ZNF451Q9Y4E5 1061 aa12.14□□□□□ -0.47
TOP3A-215ENST00000583328 PCDHGA9Q9Y5G4 932 aaKnown RBP12.14□□□□□ -0.47
TOP3A-215ENST00000583328 TEP1Q99973 2627 aaKnown RBP12.13□□□□□ -0.47
TOP3A-215ENST00000583328 GOLGA6L3A6NEY3 463 aa12.13□□□□□ -0.47
TOP3A-215ENST00000583328 ARGFXA6NJG6 315 aa12.13□□□□□ -0.47
TOP3A-215ENST00000583328 MAFKO60675 156 aa12.13□□□□□ -0.47
TOP3A-215ENST00000583328 LRCH4O75427 683 aa12.13□□□□□ -0.47
TOP3A-215ENST00000583328 CLDN1O95832 211 aa12.13□□□□□ -0.47
TOP3A-215ENST00000583328 AMPD1P23109 780 aa12.13□□□□□ -0.47
TOP3A-215ENST00000583328 VARSP26640 1264 aaKnown RBP12.13□□□□□ -0.47
TOP3A-215ENST00000583328 MIPP30301 263 aa12.13□□□□□ -0.47
TOP3A-215ENST00000583328 UBE2IP63279 158 aaKnown RBP12.13□□□□□ -0.47
TOP3A-215ENST00000583328 DPYSQ14117 519 aa12.13□□□□□ -0.47
TOP3A-215ENST00000583328 UGT8Q16880 541 aa12.13□□□□□ -0.47
TOP3A-215ENST00000583328 CYB5D1Q6P9G0 228 aa12.13□□□□□ -0.47
TOP3A-215ENST00000583328 ARFGAP1Q8N6T3 406 aa12.13□□□□□ -0.47
TOP3A-215ENST00000583328 GPR87Q9BY21 358 aa12.13□□□□□ -0.47
TOP3A-215ENST00000583328 MFRPQ9BY79 579 aa12.13□□□□□ -0.47
TOP3A-215ENST00000583328 ING2Q9H160 280 aa12.13□□□□□ -0.47
TOP3A-215ENST00000583328 OSGEPL1Q9H4B0 414 aa12.13□□□□□ -0.47
TOP3A-215ENST00000583328 PDE7BQ9NP56 450 aa12.13□□□□□ -0.47
TOP3A-215ENST00000583328 NT5MQ9NPB1 228 aa12.13□□□□□ -0.47
TOP3A-215ENST00000583328 IGSF5Q9NSI5 407 aa12.13□□□□□ -0.47
TOP3A-215ENST00000583328 KLC4Q9NSK0 619 aa12.13□□□□□ -0.47
TOP3A-215ENST00000583328 LUZP4Q9P127 313 aa12.13□□□□□ -0.47
TOP3A-215ENST00000583328 DNPEPQ9ULA0 475 aa12.13□□□□□ -0.47
TOP3A-215ENST00000583328 SLC30A1Q9Y6M5 507 aa12.13□□□□□ -0.47
TOP3A-215ENST00000583328 A0A0J9YYE9 177 aa12.12□□□□□ -0.47
TOP3A-215ENST00000583328 A0A1W2PQJ5 194 aa12.12□□□□□ -0.47
TOP3A-215ENST00000583328 H3BRJ5 948 aa12.12□□□□□ -0.47
TOP3A-215ENST00000583328 KIF1CO43896 1103 aaKnown RBP12.12□□□□□ -0.47
TOP3A-215ENST00000583328 NUAK1O60285 661 aa12.12□□□□□ -0.47
TOP3A-215ENST00000583328 FZD6O60353 706 aa12.12□□□□□ -0.47
TOP3A-215ENST00000583328 DPM1O60762 260 aa12.12□□□□□ -0.47
TOP3A-215ENST00000583328 CLDN7O95471 211 aa12.12□□□□□ -0.47
TOP3A-215ENST00000583328 TRBC1P01850 177 aa12.12□□□□□ -0.47
TOP3A-215ENST00000583328 XRCC1P18887 633 aaPredicted RBP12.12□□□□□ -0.47
TOP3A-215ENST00000583328 PTPN4P29074 926 aa12.12□□□□□ -0.47
TOP3A-215ENST00000583328 ARL4AP40617 200 aa12.12□□□□□ -0.47
TOP3A-215ENST00000583328 SLC19A1P41440 591 aa12.12□□□□□ -0.47
TOP3A-215ENST00000583328 RPS18P62269 152 aaKnown RBP12.12□□□□□ -0.47
TOP3A-215ENST00000583328 RPS15P62841 145 aaKnown RBP12.12□□□□□ -0.47
TOP3A-215ENST00000583328 MAMLD1Q13495 774 aa12.12□□□□□ -0.47
TOP3A-215ENST00000583328 TRIM14Q14142 442 aa12.12□□□□□ -0.47
TOP3A-215ENST00000583328 CHRNA6Q15825 494 aa12.12□□□□□ -0.47
TOP3A-215ENST00000583328 PRR30Q53SZ7 412 aaPredicted RBP12.12□□□□□ -0.47
TOP3A-215ENST00000583328 TMCO3Q6UWJ1 677 aa12.12□□□□□ -0.47
TOP3A-215ENST00000583328 FAM92BQ6ZTR7 304 aa12.12□□□□□ -0.47
TOP3A-215ENST00000583328 PSTKQ8IV42 348 aaKnown RBP12.12□□□□□ -0.47
TOP3A-215ENST00000583328 VSTM4Q8IW00 320 aa12.12□□□□□ -0.47
TOP3A-215ENST00000583328 SRRM1Q8IYB3 904 aaKnown RBP12.12□□□□□ -0.47
TOP3A-215ENST00000583328 ATPAF2Q8N5M1 289 aa12.12□□□□□ -0.47
TOP3A-215ENST00000583328 KLHL6Q8WZ60 621 aa12.12□□□□□ -0.47
TOP3A-215ENST00000583328 ZDHHC12Q96GR4 267 aa12.12□□□□□ -0.47
TOP3A-215ENST00000583328 RUFY1Q96T51 708 aa12.12□□□□□ -0.47
TOP3A-215ENST00000583328 BRD8Q9H0E9 1235 aa12.12□□□□□ -0.47
TOP3A-215ENST00000583328 CARD9Q9H257 536 aa12.12□□□□□ -0.47
TOP3A-215ENST00000583328 FAM83DQ9H4H8 585 aa12.12□□□□□ -0.47
TOP3A-215ENST00000583328 MLXIPLQ9NP71 852 aa12.12□□□□□ -0.47
TOP3A-215ENST00000583328 PARVAQ9NVD7 372 aa12.12□□□□□ -0.47
TOP3A-215ENST00000583328 ETNK2Q9NVF9 386 aa12.12□□□□□ -0.47
TOP3A-215ENST00000583328 SCHIP1Q9P0W5 487 aaPredicted RBP12.12□□□□□ -0.47
TOP3A-215ENST00000583328 RARRES3Q9UL19 164 aa12.12□□□□□ -0.47
TOP3A-215ENST00000583328 SRPK3Q9UPE1 567 aa12.12□□□□□ -0.47
TOP3A-215ENST00000583328 FARSAQ9Y285 508 aaKnown RBP12.12□□□□□ -0.47
TOP3A-215ENST00000583328 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.12□□□□□ -0.47
TOP3A-215ENST00000583328 TIAF1O95411 115 aa12.11□□□□□ -0.47
TOP3A-215ENST00000583328 CCDC172P0C7W6 258 aa12.11□□□□□ -0.47
TOP3A-215ENST00000583328 FERP16591 822 aa12.11□□□□□ -0.47
TOP3A-215ENST00000583328 ZNF8P17098 575 aaPredicted RBP12.11□□□□□ -0.47
TOP3A-215ENST00000583328 TNFRSF8P28908 595 aa12.11□□□□□ -0.47
TOP3A-215ENST00000583328 CLCNKAP51800 687 aa12.11□□□□□ -0.47
TOP3A-215ENST00000583328 CDH6P55285 790 aa12.11□□□□□ -0.47
TOP3A-215ENST00000583328 PDE1BQ01064 536 aa12.11□□□□□ -0.47
TOP3A-215ENST00000583328 PAPD7Q5XG87 772 aaKnown RBP12.11□□□□□ -0.47
TOP3A-215ENST00000583328 IRGCQ6NXR0 463 aa12.11□□□□□ -0.47
TOP3A-215ENST00000583328 JMJD6Q6NYC1 403 aaPredicted RBP12.11□□□□□ -0.47
TOP3A-215ENST00000583328 FAM199XQ6PEV8 388 aaPredicted RBP12.11□□□□□ -0.47
TOP3A-215ENST00000583328 PRSS42Q7Z5A4 293 aa12.11□□□□□ -0.47
TOP3A-215ENST00000583328 SYVN1Q86TM6 617 aa12.11□□□□□ -0.47
TOP3A-215ENST00000583328 TICAM1Q8IUC6 712 aa12.11□□□□□ -0.47
TOP3A-215ENST00000583328 RAVER1Q8IY67 606 aaKnown RBP12.11□□□□□ -0.47
TOP3A-215ENST00000583328 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.11□□□□□ -0.47
TOP3A-215ENST00000583328 MRFAP1L1Q96HT8 127 aa12.11□□□□□ -0.47
TOP3A-215ENST00000583328 WDR24Q96S15 920 aa12.11□□□□□ -0.47
TOP3A-215ENST00000583328 AKIRIN1Q9H9L7 192 aaPredicted RBP12.11□□□□□ -0.47
TOP3A-215ENST00000583328 ATXN10Q9UBB4 475 aa12.11□□□□□ -0.47
TOP3A-215ENST00000583328 ERRFI1Q9UJM3 462 aaPredicted RBP12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms