RNA–Protein interactions for RNA: ENST00000560983.1

HERC1-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-211ENST00000560983 PTGER4P35408 488 aa3.84□□□□□ -1.79
HERC1-211ENST00000560983 DRD3P35462 400 aa3.84□□□□□ -1.79
HERC1-211ENST00000560983 SLC6A9P48067 706 aa3.84□□□□□ -1.79
HERC1-211ENST00000560983 ACOT2P49753 483 aa3.84□□□□□ -1.79
HERC1-211ENST00000560983 METAP1P53582 386 aa3.84□□□□□ -1.79
HERC1-211ENST00000560983 MAPK10P53779 464 aa3.84□□□□□ -1.79
HERC1-211ENST00000560983 CDK17Q00537 523 aa3.84□□□□□ -1.79
HERC1-211ENST00000560983 CDC20Q12834 499 aa3.84□□□□□ -1.79
HERC1-211ENST00000560983 STRN3Q13033 797 aa3.84□□□□□ -1.79
HERC1-211ENST00000560983 HDAC1Q13547 482 aaPredicted RBP3.84□□□□□ -1.79
HERC1-211ENST00000560983 CALCRLQ16602 461 aa3.84□□□□□ -1.79
HERC1-211ENST00000560983 KYAT1Q16773 422 aa3.84□□□□□ -1.79
HERC1-211ENST00000560983 DEFB133Q30KQ1 61 aa3.84□□□□□ -1.79
HERC1-211ENST00000560983 ADCK5Q3MIX3 580 aa3.84□□□□□ -1.79
HERC1-211ENST00000560983 ZRANB3Q5FWF4 1079 aa3.84□□□□□ -1.79
HERC1-211ENST00000560983 ATP1A1-AS1Q5TC04 95 aa3.84□□□□□ -1.79
HERC1-211ENST00000560983 TBC1D3GQ6DHY5 549 aa3.84□□□□□ -1.79
HERC1-211ENST00000560983 TBC1D3CQ6IPX1 549 aa3.84□□□□□ -1.79
HERC1-211ENST00000560983 SLC39A4Q6P5W5 647 aa3.84□□□□□ -1.79
HERC1-211ENST00000560983 CRELD2Q6UXH1 353 aaPredicted RBP3.84□□□□□ -1.79
HERC1-211ENST00000560983 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP3.84□□□□□ -1.79
HERC1-211ENST00000560983 C1orf186Q6ZWK4 172 aa3.84□□□□□ -1.79
HERC1-211ENST00000560983 STRA8Q7Z7C7 330 aa3.84□□□□□ -1.79
HERC1-211ENST00000560983 CHD1LQ86WJ1 897 aa3.84□□□□□ -1.79
HERC1-211ENST00000560983 CCDC83Q8IWF9 413 aa3.84□□□□□ -1.79
HERC1-211ENST00000560983 TBC1D3Q8IZP1 549 aaPredicted RBP3.84□□□□□ -1.79
HERC1-211ENST00000560983 LNX2Q8N448 690 aa3.84□□□□□ -1.79
HERC1-211ENST00000560983 SYT2Q8N9I0 419 aaPredicted RBP3.84□□□□□ -1.79
HERC1-211ENST00000560983 ZNF548Q8NEK5 533 aaPredicted RBP3.84□□□□□ -1.79
HERC1-211ENST00000560983 RUFY2Q8WXA3 655 aa3.84□□□□□ -1.79
HERC1-211ENST00000560983 FBXO32Q969P5 355 aa3.84□□□□□ -1.79
HERC1-211ENST00000560983 TMEM159Q96B96 161 aa3.84□□□□□ -1.79
HERC1-211ENST00000560983 BMFQ96LC9 184 aa3.84□□□□□ -1.79
HERC1-211ENST00000560983 SYT15Q9BQS2 421 aa3.84□□□□□ -1.79
HERC1-211ENST00000560983 ZSWIM1Q9BR11 485 aa3.84□□□□□ -1.79
HERC1-211ENST00000560983 DUSP26Q9BV47 211 aa3.84□□□□□ -1.79
HERC1-211ENST00000560983 SLC2A11Q9BYW1 496 aa3.84□□□□□ -1.79
HERC1-211ENST00000560983 SPRY4Q9C004 299 aa3.84□□□□□ -1.79
HERC1-211ENST00000560983 TMEM60Q9H2L4 133 aa3.84□□□□□ -1.79
HERC1-211ENST00000560983 ASB7Q9H672 318 aa3.84□□□□□ -1.79
HERC1-211ENST00000560983 C17orf75Q9HAS0 396 aa3.84□□□□□ -1.79
HERC1-211ENST00000560983 FBXO34Q9NWN3 711 aa3.84□□□□□ -1.79
HERC1-211ENST00000560983 CDH9Q9ULB4 789 aa3.84□□□□□ -1.79
HERC1-211ENST00000560983 PCDHGA3Q9Y5H0 932 aa3.84□□□□□ -1.79
HERC1-211ENST00000560983 SNX9Q9Y5X1 595 aa3.84□□□□□ -1.79
HERC1-211ENST00000560983 OBSL1O75147 1896 aa3.84□□□□□ -1.8
HERC1-211ENST00000560983 FN1P02751 2386 aaKnown RBP3.83□□□□□ -1.8
HERC1-211ENST00000560983 RP1L1Q8IWN7 2480 aaPredicted RBP3.83□□□□□ -1.8
HERC1-211ENST00000560983 LOC101059948A0A1B0GTJ6 334 aa3.83□□□□□ -1.8
HERC1-211ENST00000560983 MKRN2OSH3BPM6 223 aa3.83□□□□□ -1.8
HERC1-211ENST00000560983 CLDN5O00501 218 aa3.83□□□□□ -1.8
HERC1-211ENST00000560983 MDM4O15151 490 aa3.83□□□□□ -1.8
HERC1-211ENST00000560983 SLC31A1O15431 190 aa3.83□□□□□ -1.8
HERC1-211ENST00000560983 AQP9O43315 295 aa3.83□□□□□ -1.8
HERC1-211ENST00000560983 KRT86O43790 486 aa3.83□□□□□ -1.8
HERC1-211ENST00000560983 PPP6R2O75170 966 aa3.83□□□□□ -1.8
HERC1-211ENST00000560983 ZFPL1O95159 310 aa3.83□□□□□ -1.8
HERC1-211ENST00000560983 RTN3O95197 1032 aaPredicted RBP3.83□□□□□ -1.8
HERC1-211ENST00000560983 DLDP09622 509 aaKnown RBP3.83□□□□□ -1.8
HERC1-211ENST00000560983 FGF3P11487 239 aaPredicted RBP3.83□□□□□ -1.8
HERC1-211ENST00000560983 CD1EP15812 388 aa3.83□□□□□ -1.8
HERC1-211ENST00000560983 CAPN3P20807 821 aa3.83□□□□□ -1.8
HERC1-211ENST00000560983 C5AR1P21730 350 aa3.83□□□□□ -1.8
HERC1-211ENST00000560983 CHKAP35790 457 aa3.83□□□□□ -1.8
HERC1-211ENST00000560983 ATP5C1P36542 298 aaKnown RBP3.83□□□□□ -1.8
HERC1-211ENST00000560983 NUDT1P36639 197 aa3.83□□□□□ -1.8
HERC1-211ENST00000560983 PNPLA4P41247 253 aa3.83□□□□□ -1.8
HERC1-211ENST00000560983 MATR3P43243 847 aaKnown RBP eCLIP3.83□□□□□ -1.8
HERC1-211ENST00000560983 MTNR1BP49286 362 aa3.83□□□□□ -1.8
HERC1-211ENST00000560983 VAV2P52735 878 aa3.83□□□□□ -1.8
HERC1-211ENST00000560983 CLDN2P57739 230 aa3.83□□□□□ -1.8
HERC1-211ENST00000560983 RAP2BP61225 183 aa3.83□□□□□ -1.8
HERC1-211ENST00000560983 HNRNPKP61978 463 aaKnown RBP eCLIP3.83□□□□□ -1.8
HERC1-211ENST00000560983 NUCB1Q02818 461 aa3.83□□□□□ -1.8
HERC1-211ENST00000560983 MGAT2Q10469 447 aa3.83□□□□□ -1.8
HERC1-211ENST00000560983 FGL2Q14314 439 aa3.83□□□□□ -1.8
HERC1-211ENST00000560983 FZD2Q14332 565 aa3.83□□□□□ -1.8
HERC1-211ENST00000560983 C16orf72Q14CZ0 275 aa3.83□□□□□ -1.8
HERC1-211ENST00000560983 MAPRE1Q15691 268 aaKnown RBP3.83□□□□□ -1.8
HERC1-211ENST00000560983 HNRNPA1L2Q32P51 320 aaKnown RBP3.83□□□□□ -1.8
HERC1-211ENST00000560983 SPDYE7PQ495Y7 208 aa3.83□□□□□ -1.8
HERC1-211ENST00000560983 MDH1BQ5I0G3 518 aa3.83□□□□□ -1.8
HERC1-211ENST00000560983 PAPD7Q5XG87 772 aaKnown RBP3.83□□□□□ -1.8
HERC1-211ENST00000560983 RINT1Q6NUQ1 792 aa3.83□□□□□ -1.8
HERC1-211ENST00000560983 Q6ZSR6 202 aa3.83□□□□□ -1.8
HERC1-211ENST00000560983 PAQR9Q6ZVX9 377 aa3.83□□□□□ -1.8
HERC1-211ENST00000560983 ABI3BPQ7Z7G0 1075 aa3.83□□□□□ -1.8
HERC1-211ENST00000560983 TRIM69Q86WT6 500 aa3.83□□□□□ -1.8
HERC1-211ENST00000560983 SMC5Q8IY18 1101 aa3.83□□□□□ -1.8
HERC1-211ENST00000560983 CMIPQ8IY22 773 aa3.83□□□□□ -1.8
HERC1-211ENST00000560983 CACNA2D3Q8IZS8 1091 aa3.83□□□□□ -1.8
HERC1-211ENST00000560983 PQLC1Q8N2U9 271 aa3.83□□□□□ -1.8
HERC1-211ENST00000560983 DDX51Q8N8A6 666 aaKnown RBP eCLIP3.83□□□□□ -1.8
HERC1-211ENST00000560983 GLIS1Q8NBF1 620 aa3.83□□□□□ -1.8
HERC1-211ENST00000560983 NAT6Q93015 286 aa3.83□□□□□ -1.8
HERC1-211ENST00000560983 GTF3C6Q969F1 213 aa3.83□□□□□ -1.8
HERC1-211ENST00000560983 LMLNQ96KR4 655 aa3.83□□□□□ -1.8
HERC1-211ENST00000560983 GFM1Q96RP9 751 aaKnown RBP3.83□□□□□ -1.8
HERC1-211ENST00000560983 NAP1L4Q99733 375 aaKnown RBP3.83□□□□□ -1.8
HERC1-211ENST00000560983 CMKLR1Q99788 373 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms