RNA–Protein interactions for RNA: ENST00000560307.5

SNRPA1-209, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 433 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-209ENST00000560307 DENND1BQ6P3S1 775 aa5.94□□□□□ -1.46
SNRPA1-209ENST00000560307 NPNTQ6UXI9 565 aa5.94□□□□□ -1.46
SNRPA1-209ENST00000560307 ZPBP2Q6X784 338 aa5.94□□□□□ -1.46
SNRPA1-209ENST00000560307 KIAA0408Q6ZU52 694 aa5.94□□□□□ -1.46
SNRPA1-209ENST00000560307 PIWIL4Q7Z3Z4 852 aaKnown RBP5.94□□□□□ -1.46
SNRPA1-209ENST00000560307 AKAP14Q86UN6 197 aa5.94□□□□□ -1.46
SNRPA1-209ENST00000560307 ARMC8Q8IUR7 673 aa5.94□□□□□ -1.46
SNRPA1-209ENST00000560307 TBC1D21Q8IYX1 336 aa5.94□□□□□ -1.46
SNRPA1-209ENST00000560307 KIAA0319LQ8IZA0 1049 aa5.94□□□□□ -1.46
SNRPA1-209ENST00000560307 MPP5Q8N3R9 675 aa5.94□□□□□ -1.46
SNRPA1-209ENST00000560307 SDR16C5Q8N3Y7 309 aa5.94□□□□□ -1.46
SNRPA1-209ENST00000560307 MFSD4AQ8N468 514 aa5.94□□□□□ -1.46
SNRPA1-209ENST00000560307 CBR4Q8N4T8 237 aa5.94□□□□□ -1.46
SNRPA1-209ENST00000560307 MINDY1Q8N5J2 469 aa5.94□□□□□ -1.46
SNRPA1-209ENST00000560307 PQLC3Q8N755 202 aa5.94□□□□□ -1.46
SNRPA1-209ENST00000560307 TRPV3Q8NET8 790 aa5.94□□□□□ -1.46
SNRPA1-209ENST00000560307 OR7G1Q8NGA0 311 aa5.94□□□□□ -1.46
SNRPA1-209ENST00000560307 CXorf38Q8TB03 319 aa5.94□□□□□ -1.46
SNRPA1-209ENST00000560307 TSPEARQ8WU66 669 aa5.94□□□□□ -1.46
SNRPA1-209ENST00000560307 STYXQ8WUJ0 223 aa5.94□□□□□ -1.46
SNRPA1-209ENST00000560307 ARNTL2Q8WYA1 636 aa5.94□□□□□ -1.46
SNRPA1-209ENST00000560307 SNX19Q92543 992 aa5.94□□□□□ -1.46
SNRPA1-209ENST00000560307 TRIM63Q969Q1 353 aa5.94□□□□□ -1.46
SNRPA1-209ENST00000560307 MUL1Q969V5 352 aa5.94□□□□□ -1.46
SNRPA1-209ENST00000560307 FKBP10Q96AY3 582 aa5.94□□□□□ -1.46
SNRPA1-209ENST00000560307 PPWD1Q96BP3 646 aaKnown RBP5.94□□□□□ -1.46
SNRPA1-209ENST00000560307 FBXL8Q96CD0 374 aa5.94□□□□□ -1.46
SNRPA1-209ENST00000560307 CCDC126Q96EE4 140 aa5.94□□□□□ -1.46
SNRPA1-209ENST00000560307 ZNF486Q96H40 463 aaPredicted RBP5.94□□□□□ -1.46
SNRPA1-209ENST00000560307 C1orf159Q96HA4 380 aa5.94□□□□□ -1.46
SNRPA1-209ENST00000560307 SPATA13Q96N96 652 aa5.94□□□□□ -1.46
SNRPA1-209ENST00000560307 SNX18Q96RF0 628 aa5.94□□□□□ -1.46
SNRPA1-209ENST00000560307 PEBP4Q96S96 227 aa5.94□□□□□ -1.46
SNRPA1-209ENST00000560307 NPAS2Q99743 824 aa5.94□□□□□ -1.46
SNRPA1-209ENST00000560307 MCMBPQ9BTE3 642 aa5.94□□□□□ -1.46
SNRPA1-209ENST00000560307 ACE2Q9BYF1 805 aaPredicted RBP5.94□□□□□ -1.46
SNRPA1-209ENST00000560307 SEMA6AQ9H2E6 1030 aa5.94□□□□□ -1.46
SNRPA1-209ENST00000560307 NOL11Q9H8H0 719 aaKnown RBP5.94□□□□□ -1.46
SNRPA1-209ENST00000560307 LRRC40Q9H9A6 602 aa5.94□□□□□ -1.46
SNRPA1-209ENST00000560307 HPS4Q9NQG7 708 aa5.94□□□□□ -1.46
SNRPA1-209ENST00000560307 STAU2Q9NUL3 570 aaKnown RBP eCLIP5.94□□□□□ -1.46
SNRPA1-209ENST00000560307 GDAP2Q9NXN4 497 aa5.94□□□□□ -1.46
SNRPA1-209ENST00000560307 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.94□□□□□ -1.46
SNRPA1-209ENST00000560307 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.94□□□□□ -1.46
SNRPA1-209ENST00000560307 IFT80Q9P2H3 777 aaPredicted RBP5.94□□□□□ -1.46
SNRPA1-209ENST00000560307 TMX2Q9Y320 296 aa5.94□□□□□ -1.46
SNRPA1-209ENST00000560307 VWA7Q9Y334 891 aa5.94□□□□□ -1.46
SNRPA1-209ENST00000560307 NDUFAF1Q9Y375 327 aa5.94□□□□□ -1.46
SNRPA1-209ENST00000560307 TESMINQ9Y4I5 508 aa5.94□□□□□ -1.46
SNRPA1-209ENST00000560307 ANGPTL3Q9Y5C1 460 aa5.94□□□□□ -1.46
SNRPA1-209ENST00000560307 PCDHGB1Q9Y5G3 927 aa5.94□□□□□ -1.46
SNRPA1-209ENST00000560307 BACE2Q9Y5Z0 518 aa5.94□□□□□ -1.46
SNRPA1-209ENST00000560307 A3GALT2U3KPV4 340 aa5.94□□□□□ -1.46
SNRPA1-209ENST00000560307 PTPRJQ12913 1337 aa5.94□□□□□ -1.46
SNRPA1-209ENST00000560307 WDR27A2RRH5 827 aa5.93□□□□□ -1.46
SNRPA1-209ENST00000560307 TYW5A2RUC4 315 aaKnown RBP5.93□□□□□ -1.46
SNRPA1-209ENST00000560307 PRORSD1PA6NEY8 169 aa5.93□□□□□ -1.46
SNRPA1-209ENST00000560307 C2CD4BA6NLJ0 364 aa5.93□□□□□ -1.46
SNRPA1-209ENST00000560307 ERI2A8K979 691 aaKnown RBP5.93□□□□□ -1.46
SNRPA1-209ENST00000560307 KCNU1A8MYU2 1149 aa5.93□□□□□ -1.46
SNRPA1-209ENST00000560307 TARM1B6A8C7 271 aa5.93□□□□□ -1.46
SNRPA1-209ENST00000560307 TAF4O00268 1085 aa5.93□□□□□ -1.46
SNRPA1-209ENST00000560307 ASNA1O43681 348 aa5.93□□□□□ -1.46
SNRPA1-209ENST00000560307 NRP2O60462 931 aa5.93□□□□□ -1.46
SNRPA1-209ENST00000560307 TIPRLO75663 272 aa5.93□□□□□ -1.46
SNRPA1-209ENST00000560307 MYO1DO94832 1006 aa5.93□□□□□ -1.46
SNRPA1-209ENST00000560307 CSPG5O95196 566 aa5.93□□□□□ -1.46
SNRPA1-209ENST00000560307 FKBP9O95302 570 aa5.93□□□□□ -1.46
SNRPA1-209ENST00000560307 METTL18O95568 372 aa5.93□□□□□ -1.46
SNRPA1-209ENST00000560307 PTTG1O95997 202 aa5.93□□□□□ -1.46
SNRPA1-209ENST00000560307 CHEK2O96017 543 aa5.93□□□□□ -1.46
SNRPA1-209ENST00000560307 HMGCRP04035 888 aa5.93□□□□□ -1.46
SNRPA1-209ENST00000560307 SCG5P05408 212 aa5.93□□□□□ -1.46
SNRPA1-209ENST00000560307 GSNP06396 782 aa5.93□□□□□ -1.46
SNRPA1-209ENST00000560307 HOXB6P17509 224 aaKnown RBP5.93□□□□□ -1.46
SNRPA1-209ENST00000560307 TFEBP19484 476 aa5.93□□□□□ -1.46
SNRPA1-209ENST00000560307 ATP6V1B2P21281 511 aa5.93□□□□□ -1.46
SNRPA1-209ENST00000560307 MATN1P21941 496 aa5.93□□□□□ -1.46
SNRPA1-209ENST00000560307 CCND2P30279 289 aa5.93□□□□□ -1.46
SNRPA1-209ENST00000560307 RFC2P35250 354 aa5.93□□□□□ -1.46
SNRPA1-209ENST00000560307 SEPHS1P49903 392 aa5.93□□□□□ -1.46
SNRPA1-209ENST00000560307 PPP5CP53041 499 aa5.93□□□□□ -1.46
SNRPA1-209ENST00000560307 SNX16P57768 344 aa5.93□□□□□ -1.46
SNRPA1-209ENST00000560307 TGFB2P61812 414 aa5.93□□□□□ -1.46
SNRPA1-209ENST00000560307 IFITM2Q01629 132 aa5.93□□□□□ -1.46
SNRPA1-209ENST00000560307 TNK2Q07912 1038 aa5.93□□□□□ -1.46
SNRPA1-209ENST00000560307 SPP2Q13103 211 aa5.93□□□□□ -1.46
SNRPA1-209ENST00000560307 NME3Q13232 169 aa5.93□□□□□ -1.46
SNRPA1-209ENST00000560307 FASTKQ14296 549 aaKnown RBP5.93□□□□□ -1.46
SNRPA1-209ENST00000560307 DPYSL2Q16555 572 aa5.93□□□□□ -1.46
SNRPA1-209ENST00000560307 UGCGQ16739 394 aa5.93□□□□□ -1.46
SNRPA1-209ENST00000560307 HSDL1Q3SXM5 330 aa5.93□□□□□ -1.46
SNRPA1-209ENST00000560307 TIGD2Q4W5G0 525 aa5.93□□□□□ -1.46
SNRPA1-209ENST00000560307 CYBRD1Q53TN4 286 aa5.93□□□□□ -1.46
SNRPA1-209ENST00000560307 KCNT1Q5JUK3 1230 aa5.93□□□□□ -1.46
SNRPA1-209ENST00000560307 SFRP5Q5T4F7 317 aa5.93□□□□□ -1.46
SNRPA1-209ENST00000560307 CYP4A22Q5TCH4 519 aa5.93□□□□□ -1.46
SNRPA1-209ENST00000560307 MFSD4BQ5TF39 518 aa5.93□□□□□ -1.46
SNRPA1-209ENST00000560307 TTC23Q5W5X9 447 aa5.93□□□□□ -1.46
SNRPA1-209ENST00000560307 BTBD8Q5XKL5 378 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms