RNA–Protein interactions for RNA: ENST00000555172.5

KTN1-220, Transcript of kinectin 1, humanhuman

TSL 2

Gene KTN1, Length 1,985 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-220ENST00000555172 CPPED1Q9BRF8 314 aaPredicted RBP3.83□□□□□ -1.8
KTN1-220ENST00000555172 TPPP3Q9BW30 176 aa3.83□□□□□ -1.8
KTN1-220ENST00000555172 NPLQ9BXD5 320 aaPredicted RBP3.83□□□□□ -1.8
KTN1-220ENST00000555172 TBC1D10AQ9BXI6 508 aa3.83□□□□□ -1.8
KTN1-220ENST00000555172 RTN4RQ9BZR6 473 aa3.83□□□□□ -1.8
KTN1-220ENST00000555172 TKTL2Q9H0I9 626 aa3.83□□□□□ -1.8
KTN1-220ENST00000555172 GLT8D2Q9H1C3 349 aa3.83□□□□□ -1.8
KTN1-220ENST00000555172 SERHL2Q9H4I8 314 aa3.83□□□□□ -1.8
KTN1-220ENST00000555172 PLEKHA4Q9H4M7 779 aa3.83□□□□□ -1.8
KTN1-220ENST00000555172 MINDY3Q9H8M7 445 aa3.83□□□□□ -1.8
KTN1-220ENST00000555172 RPF1Q9H9Y2 349 aaKnown RBP3.83□□□□□ -1.8
KTN1-220ENST00000555172 BABAM1Q9NWV8 329 aa3.83□□□□□ -1.8
KTN1-220ENST00000555172 KIAA1456Q9P272 454 aa3.83□□□□□ -1.8
KTN1-220ENST00000555172 ATP6V1HQ9UI12 483 aa3.83□□□□□ -1.8
KTN1-220ENST00000555172 OAZ3Q9UMX2 235 aa3.83□□□□□ -1.8
KTN1-220ENST00000555172 HS3ST3A1Q9Y663 406 aa3.83□□□□□ -1.8
KTN1-220ENST00000555172 LOC100509620A0A075B734 347 aa3.82□□□□□ -1.8
KTN1-220ENST00000555172 MFSD2BA6NFX1 497 aa3.82□□□□□ -1.8
KTN1-220ENST00000555172 YDJCA8MPS7 323 aa3.82□□□□□ -1.8
KTN1-220ENST00000555172 TLR4O00206 839 aa3.82□□□□□ -1.8
KTN1-220ENST00000555172 SLC30A4O14863 429 aa3.82□□□□□ -1.8
KTN1-220ENST00000555172 RNF113AO15541 343 aaKnown RBP3.82□□□□□ -1.8
KTN1-220ENST00000555172 MED7O43513 233 aa3.82□□□□□ -1.8
KTN1-220ENST00000555172 NUDT21O43809 227 aaKnown RBP3.82□□□□□ -1.8
KTN1-220ENST00000555172 NDUFS3O75489 264 aa3.82□□□□□ -1.8
KTN1-220ENST00000555172 ZNF821O75541 412 aaPredicted RBP3.82□□□□□ -1.8
KTN1-220ENST00000555172 GCATO75600 419 aa3.82□□□□□ -1.8
KTN1-220ENST00000555172 STC2O76061 302 aa3.82□□□□□ -1.8
KTN1-220ENST00000555172 STAMBPO95630 424 aa3.82□□□□□ -1.8
KTN1-220ENST00000555172 CYP3A4P08684 503 aa3.82□□□□□ -1.8
KTN1-220ENST00000555172 EPB41P11171 864 aaKnown RBP3.82□□□□□ -1.8
KTN1-220ENST00000555172 TCEA1P23193 301 aaKnown RBP3.82□□□□□ -1.8
KTN1-220ENST00000555172 PTPN6P29350 595 aa3.82□□□□□ -1.8
KTN1-220ENST00000555172 TKTP29401 623 aaKnown RBP3.82□□□□□ -1.8
KTN1-220ENST00000555172 HOXA13P31271 388 aaPredicted RBP3.82□□□□□ -1.8
KTN1-220ENST00000555172 AKT2P31751 481 aa3.82□□□□□ -1.8
KTN1-220ENST00000555172 RPS19P39019 145 aaKnown RBP3.82□□□□□ -1.8
KTN1-220ENST00000555172 ARHGAP25P42331 645 aa3.82□□□□□ -1.8
KTN1-220ENST00000555172 VPS41P49754 854 aa3.82□□□□□ -1.8
KTN1-220ENST00000555172 PRRX1P54821 245 aa3.82□□□□□ -1.8
KTN1-220ENST00000555172 HADHBP55084 474 aaKnown RBP3.82□□□□□ -1.8
KTN1-220ENST00000555172 SRP54P61011 504 aaKnown RBP3.82□□□□□ -1.8
KTN1-220ENST00000555172 HNRNPKP61978 463 aaKnown RBP eCLIP3.82□□□□□ -1.8
KTN1-220ENST00000555172 TAP2Q03519 686 aa3.82□□□□□ -1.8
KTN1-220ENST00000555172 RBPJQ06330 500 aa3.82□□□□□ -1.8
KTN1-220ENST00000555172 ACSM2AQ08AH3 577 aa3.82□□□□□ -1.8
KTN1-220ENST00000555172 SPP2Q13103 211 aa3.82□□□□□ -1.8
KTN1-220ENST00000555172 SCGB2A2Q13296 93 aa3.82□□□□□ -1.8
KTN1-220ENST00000555172 KCNC3Q14003 757 aa3.82□□□□□ -1.8
KTN1-220ENST00000555172 CCNIQ14094 377 aa3.82□□□□□ -1.8
KTN1-220ENST00000555172 DOC2AQ14183 400 aa3.82□□□□□ -1.8
KTN1-220ENST00000555172 GALNT3Q14435 633 aa3.82□□□□□ -1.8
KTN1-220ENST00000555172 RNPS1Q15287 305 aaKnown RBP3.82□□□□□ -1.8
KTN1-220ENST00000555172 ATAD3BQ5T9A4 648 aa3.82□□□□□ -1.8
KTN1-220ENST00000555172 RNASEH2BQ5TBB1 312 aaKnown RBP3.82□□□□□ -1.8
KTN1-220ENST00000555172 ACSM2BQ68CK6 577 aa3.82□□□□□ -1.8
KTN1-220ENST00000555172 ARHGAP17Q68EM7 881 aa3.82□□□□□ -1.8
KTN1-220ENST00000555172 SLC27A1Q6PCB7 646 aa3.82□□□□□ -1.8
KTN1-220ENST00000555172 TAX1BP1Q86VP1 789 aa3.82□□□□□ -1.8
KTN1-220ENST00000555172 RFX6Q8HWS3 928 aa3.82□□□□□ -1.8
KTN1-220ENST00000555172 PSTKQ8IV42 348 aaKnown RBP3.82□□□□□ -1.8
KTN1-220ENST00000555172 SYNE4Q8N205 404 aa3.82□□□□□ -1.8
KTN1-220ENST00000555172 SETD9Q8NE22 299 aa3.82□□□□□ -1.8
KTN1-220ENST00000555172 NACC2Q96BF6 587 aa3.82□□□□□ -1.8
KTN1-220ENST00000555172 WDYHV1Q96HA8 205 aa3.82□□□□□ -1.8
KTN1-220ENST00000555172 VCPIP1Q96JH7 1222 aa3.82□□□□□ -1.8
KTN1-220ENST00000555172 QRFPRQ96P65 431 aa3.82□□□□□ -1.8
KTN1-220ENST00000555172 KLHL5Q96PQ7 755 aa3.82□□□□□ -1.8
KTN1-220ENST00000555172 PANX3Q96QZ0 392 aa3.82□□□□□ -1.8
KTN1-220ENST00000555172 TRIB1Q96RU8 372 aa3.82□□□□□ -1.8
KTN1-220ENST00000555172 LMF1Q96S06 567 aa3.82□□□□□ -1.8
KTN1-220ENST00000555172 ASCL2Q99929 193 aa3.82□□□□□ -1.8
KTN1-220ENST00000555172 INPP5KQ9BT40 448 aa3.82□□□□□ -1.8
KTN1-220ENST00000555172 ZNF747Q9BV97 191 aa3.82□□□□□ -1.8
KTN1-220ENST00000555172 S1PR5Q9H228 398 aa3.82□□□□□ -1.8
KTN1-220ENST00000555172 AKIRIN1Q9H9L7 192 aaPredicted RBP3.82□□□□□ -1.8
KTN1-220ENST00000555172 SEC61A2Q9H9S3 476 aa3.82□□□□□ -1.8
KTN1-220ENST00000555172 SLC22A11Q9NSA0 550 aa3.82□□□□□ -1.8
KTN1-220ENST00000555172 PSD3Q9NYI0 1048 aa3.82□□□□□ -1.8
KTN1-220ENST00000555172 UPB1Q9UBR1 384 aa3.82□□□□□ -1.8
KTN1-220ENST00000555172 SERTAD3Q9UJW9 196 aa3.82□□□□□ -1.8
KTN1-220ENST00000555172 CCPG1Q9ULG6 757 aa3.82□□□□□ -1.8
KTN1-220ENST00000555172 ZNF148Q9UQR1 794 aa3.82□□□□□ -1.8
KTN1-220ENST00000555172 PLEKHA6Q9Y2H5 1048 aa3.82□□□□□ -1.8
KTN1-220ENST00000555172 SPACA6W5XKT8 324 aa3.82□□□□□ -1.8
KTN1-220ENST00000555172 PHLPP2Q6ZVD8 1323 aa3.82□□□□□ -1.8
KTN1-220ENST00000555172 SERTM2A0A1B0GWG4 89 aa3.82□□□□□ -1.8
KTN1-220ENST00000555172 A0A1B0GWJ7 208 aa3.82□□□□□ -1.8
KTN1-220ENST00000555172 A0A1W2PRG0 241 aa3.82□□□□□ -1.8
KTN1-220ENST00000555172 TRIM49BA6NDI0 452 aa3.82□□□□□ -1.8
KTN1-220ENST00000555172 MAGEB17A8MXT2 336 aa3.82□□□□□ -1.8
KTN1-220ENST00000555172 MATN2O00339 956 aa3.82□□□□□ -1.8
KTN1-220ENST00000555172 ZNF213O14771 459 aa3.82□□□□□ -1.8
KTN1-220ENST00000555172 SMAD6O43541 496 aaKnown RBP3.82□□□□□ -1.8
KTN1-220ENST00000555172 MFAP3LO75121 409 aa3.82□□□□□ -1.8
KTN1-220ENST00000555172 MTRF1O75570 445 aaKnown RBP3.82□□□□□ -1.8
KTN1-220ENST00000555172 GH1P01241 217 aa3.82□□□□□ -1.8
KTN1-220ENST00000555172 IGHEP01854 428 aa3.82□□□□□ -1.8
KTN1-220ENST00000555172 THRBP10828 461 aa3.82□□□□□ -1.8
KTN1-220ENST00000555172 ANXA8P13928 327 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms