RNA–Protein interactions for RNA: ENST00000553989.1

TDP1-208, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-208ENST00000553989 RAB15P59190 212 aa8.78□□□□□ -1
TDP1-208ENST00000553989 GPLD1P80108 840 aa8.78□□□□□ -1
TDP1-208ENST00000553989 KCNAB2Q13303 367 aa8.78□□□□□ -1
TDP1-208ENST00000553989 DPYSQ14117 519 aa8.78□□□□□ -1
TDP1-208ENST00000553989 NR1D2Q14995 579 aa8.78□□□□□ -1
TDP1-208ENST00000553989 RPS6KA1Q15418 735 aa8.78□□□□□ -1
TDP1-208ENST00000553989 TDRD12Q587J7 1177 aaKnown RBP8.78□□□□□ -1
TDP1-208ENST00000553989 MEI1Q5TIA1 1274 aa8.78□□□□□ -1
TDP1-208ENST00000553989 MARC1Q5VT66 337 aa8.78□□□□□ -1
TDP1-208ENST00000553989 LRRC66Q68CR7 880 aa8.78□□□□□ -1
TDP1-208ENST00000553989 ANKS6Q68DC2 871 aa8.78□□□□□ -1
TDP1-208ENST00000553989 ZNF574Q6ZN55 896 aaPredicted RBP8.78□□□□□ -1
TDP1-208ENST00000553989 KDELC2Q7Z4H8 507 aa8.78□□□□□ -1
TDP1-208ENST00000553989 TSPAN33Q86UF1 283 aa8.78□□□□□ -1
TDP1-208ENST00000553989 TRIM74Q86UV6 250 aa8.78□□□□□ -1
TDP1-208ENST00000553989 C17orf82Q86X59 251 aaPredicted RBP8.78□□□□□ -1
TDP1-208ENST00000553989 GALNT13Q8IUC8 556 aa8.78□□□□□ -1
TDP1-208ENST00000553989 PSTKQ8IV42 348 aaKnown RBP8.78□□□□□ -1
TDP1-208ENST00000553989 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.78□□□□□ -1
TDP1-208ENST00000553989 ARFGAP1Q8N6T3 406 aa8.78□□□□□ -1
TDP1-208ENST00000553989 PRR7Q8TB68 274 aa8.78□□□□□ -1
TDP1-208ENST00000553989 AP2M1Q96CW1 435 aa8.78□□□□□ -1
TDP1-208ENST00000553989 NSMCE3Q96MG7 304 aa8.78□□□□□ -1
TDP1-208ENST00000553989 RUFY1Q96T51 708 aa8.78□□□□□ -1
TDP1-208ENST00000553989 MGME1Q9BQP7 344 aa8.78□□□□□ -1
TDP1-208ENST00000553989 LRRC1Q9BTT6 524 aa8.78□□□□□ -1
TDP1-208ENST00000553989 DDA1Q9BW61 102 aa8.78□□□□□ -1
TDP1-208ENST00000553989 TLR10Q9BXR5 811 aa8.78□□□□□ -1
TDP1-208ENST00000553989 ASPSCR1Q9BZE9 553 aa8.78□□□□□ -1
TDP1-208ENST00000553989 TRIM7Q9C029 511 aa8.78□□□□□ -1
TDP1-208ENST00000553989 ADNPQ9H2P0 1102 aa8.78□□□□□ -1
TDP1-208ENST00000553989 GPN2Q9H9Y4 310 aaPredicted RBP8.78□□□□□ -1
TDP1-208ENST00000553989 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.78□□□□□ -1
TDP1-208ENST00000553989 TMEM9Q9P0T7 183 aa8.78□□□□□ -1
TDP1-208ENST00000553989 SLC17A4Q9Y2C5 497 aa8.78□□□□□ -1
TDP1-208ENST00000553989 PLEKHM1Q9Y4G2 1056 aa8.78□□□□□ -1
TDP1-208ENST00000553989 PCDHGA3Q9Y5H0 932 aa8.78□□□□□ -1
TDP1-208ENST00000553989 A0A0U1RQS6 177 aa8.77□□□□□ -1.01
TDP1-208ENST00000553989 TMEM191CA6NGB0 347 aa8.77□□□□□ -1.01
TDP1-208ENST00000553989 CCDC188H7C350 402 aa8.77□□□□□ -1.01
TDP1-208ENST00000553989 ZNF185O15231 689 aa8.77□□□□□ -1.01
TDP1-208ENST00000553989 INPP4BO15327 924 aa8.77□□□□□ -1.01
TDP1-208ENST00000553989 LRCH4O75427 683 aa8.77□□□□□ -1.01
TDP1-208ENST00000553989 PGLSO95336 258 aa8.77□□□□□ -1.01
TDP1-208ENST00000553989 MAP3K6O95382 1288 aa8.77□□□□□ -1.01
TDP1-208ENST00000553989 FTLP02792 175 aaPredicted RBP8.77□□□□□ -1.01
TDP1-208ENST00000553989 FUCA1P04066 466 aa8.77□□□□□ -1.01
TDP1-208ENST00000553989 PYGLP06737 847 aa8.77□□□□□ -1.01
TDP1-208ENST00000553989 TEAD1P28347 426 aa8.77□□□□□ -1.01
TDP1-208ENST00000553989 SOX11P35716 441 aa8.77□□□□□ -1.01
TDP1-208ENST00000553989 SSR1P43307 286 aaKnown RBP8.77□□□□□ -1.01
TDP1-208ENST00000553989 HCAR3P49019 387 aa8.77□□□□□ -1.01
TDP1-208ENST00000553989 CDH6P55285 790 aa8.77□□□□□ -1.01
TDP1-208ENST00000553989 HHEXQ03014 270 aa8.77□□□□□ -1.01
TDP1-208ENST00000553989 LRP8Q14114 963 aa8.77□□□□□ -1.01
TDP1-208ENST00000553989 KRT81Q14533 505 aa8.77□□□□□ -1.01
TDP1-208ENST00000553989 PTPRRQ15256 657 aa8.77□□□□□ -1.01
TDP1-208ENST00000553989 DNAJC21Q5F1R6 531 aaKnown RBP8.77□□□□□ -1.01
TDP1-208ENST00000553989 C8orf74Q6P047 294 aa8.77□□□□□ -1.01
TDP1-208ENST00000553989 TMEM71Q6P5X7 295 aa8.77□□□□□ -1.01
TDP1-208ENST00000553989 IRF2BP2Q7Z5L9 587 aa8.77□□□□□ -1.01
TDP1-208ENST00000553989 NLGN4XQ8N0W4 816 aa8.77□□□□□ -1.01
TDP1-208ENST00000553989 PGBD5Q8N414 524 aa8.77□□□□□ -1.01
TDP1-208ENST00000553989 MREGQ8N565 214 aa8.77□□□□□ -1.01
TDP1-208ENST00000553989 NLGN4YQ8NFZ3 816 aaPredicted RBP8.77□□□□□ -1.01
TDP1-208ENST00000553989 ZNF564Q8TBZ8 553 aaPredicted RBP8.77□□□□□ -1.01
TDP1-208ENST00000553989 ACTRT1Q8TDG2 376 aa8.77□□□□□ -1.01
TDP1-208ENST00000553989 SLC37A2Q8TED4 501 aa8.77□□□□□ -1.01
TDP1-208ENST00000553989 TRIM11Q96F44 468 aa8.77□□□□□ -1.01
TDP1-208ENST00000553989 SCRN2Q96FV2 425 aa8.77□□□□□ -1.01
TDP1-208ENST00000553989 CATSPER2Q96P56 530 aa8.77□□□□□ -1.01
TDP1-208ENST00000553989 TEFMQ96QE5 360 aaKnown RBP8.77□□□□□ -1.01
TDP1-208ENST00000553989 CTRCQ99895 268 aa8.77□□□□□ -1.01
TDP1-208ENST00000553989 SH3GL2Q99962 352 aa8.77□□□□□ -1.01
TDP1-208ENST00000553989 SLC12A9Q9BXP2 914 aa8.77□□□□□ -1.01
TDP1-208ENST00000553989 MRPL47Q9HD33 250 aaKnown RBP8.77□□□□□ -1.01
TDP1-208ENST00000553989 NT5MQ9NPB1 228 aa8.77□□□□□ -1.01
TDP1-208ENST00000553989 OCIAD1Q9NX40 245 aa8.77□□□□□ -1.01
TDP1-208ENST00000553989 KLHL3Q9UH77 587 aa8.77□□□□□ -1.01
TDP1-208ENST00000553989 ZNHIT2Q9UHR6 403 aa8.77□□□□□ -1.01
TDP1-208ENST00000553989 SPTA1P02549 2419 aa8.77□□□□□ -1.01
TDP1-208ENST00000553989 ARHGEF17Q96PE2 2063 aaPredicted RBP8.77□□□□□ -1.01
TDP1-208ENST00000553989 SDK2Q58EX2 2172 aa8.76□□□□□ -1.01
TDP1-208ENST00000553989 B4E171 279 aa8.76□□□□□ -1.01
TDP1-208ENST00000553989 CAPN5O15484 640 aaPredicted RBP8.76□□□□□ -1.01
TDP1-208ENST00000553989 MAFKO60675 156 aa8.76□□□□□ -1.01
TDP1-208ENST00000553989 SNX2O60749 519 aa8.76□□□□□ -1.01
TDP1-208ENST00000553989 H2AFZP0C0S5 128 aa8.76□□□□□ -1.01
TDP1-208ENST00000553989 MYBL1P10243 752 aa8.76□□□□□ -1.01
TDP1-208ENST00000553989 CR2P20023 1033 aa8.76□□□□□ -1.01
TDP1-208ENST00000553989 CA4P22748 312 aa8.76□□□□□ -1.01
TDP1-208ENST00000553989 PCK1P35558 622 aa8.76□□□□□ -1.01
TDP1-208ENST00000553989 TSPAN7P41732 249 aa8.76□□□□□ -1.01
TDP1-208ENST00000553989 ARSDP51689 593 aa8.76□□□□□ -1.01
TDP1-208ENST00000553989 DPTQ07507 201 aa8.76□□□□□ -1.01
TDP1-208ENST00000553989 NFATC2Q13469 925 aa8.76□□□□□ -1.01
TDP1-208ENST00000553989 CUL1Q13616 776 aa8.76□□□□□ -1.01
TDP1-208ENST00000553989 DPYSL2Q16555 572 aa8.76□□□□□ -1.01
TDP1-208ENST00000553989 SKIDA1Q1XH10 827 aa8.76□□□□□ -1.01
TDP1-208ENST00000553989 PYCR3Q53H96 274 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms