RNA–Protein interactions for RNA: ENST00000543872.6

SMG8-202, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMG8, Length 3,477 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-202ENST00000543872 FAM72CH0Y354 149 aa12.58□□□□□ -0.39
SMG8-202ENST00000543872 SSX4O60224 188 aa12.58□□□□□ -0.39
SMG8-202ENST00000543872 TSPAN9O75954 239 aa12.58□□□□□ -0.39
SMG8-202ENST00000543872 MT-CYBP00156 380 aaPredicted RBP12.58□□□□□ -0.39
SMG8-202ENST00000543872 UMPSP11172 480 aa12.58□□□□□ -0.39
SMG8-202ENST00000543872 HRH2P25021 359 aa12.58□□□□□ -0.39
SMG8-202ENST00000543872 KRT6CP48668 564 aa12.58□□□□□ -0.39
SMG8-202ENST00000543872 SH3BP2P78314 561 aa12.58□□□□□ -0.39
SMG8-202ENST00000543872 BST2Q10589 180 aaKnown RBP12.58□□□□□ -0.39
SMG8-202ENST00000543872 CDH17Q12864 832 aa12.58□□□□□ -0.39
SMG8-202ENST00000543872 ZFP69Q49AA0 526 aa12.58□□□□□ -0.39
SMG8-202ENST00000543872 FAM72AQ5TYM5 149 aa12.58□□□□□ -0.39
SMG8-202ENST00000543872 FAM72DQ6L9T8 149 aa12.58□□□□□ -0.39
SMG8-202ENST00000543872 GALNT5Q7Z7M9 940 aa12.58□□□□□ -0.39
SMG8-202ENST00000543872 FAM72BQ86X60 149 aa12.58□□□□□ -0.39
SMG8-202ENST00000543872 DCP1BQ8IZD4 617 aaKnown RBP12.58□□□□□ -0.39
SMG8-202ENST00000543872 TTC16Q8NEE8 873 aa12.58□□□□□ -0.39
SMG8-202ENST00000543872 SLC35F5Q8WV83 523 aa12.58□□□□□ -0.39
SMG8-202ENST00000543872 RHNO1Q9BSD3 238 aa12.58□□□□□ -0.39
SMG8-202ENST00000543872 MCMBPQ9BTE3 642 aa12.58□□□□□ -0.39
SMG8-202ENST00000543872 OR2B2Q9GZK3 357 aa12.58□□□□□ -0.39
SMG8-202ENST00000543872 FBXO5Q9UKT4 447 aa12.58□□□□□ -0.39
SMG8-202ENST00000543872 FZD10Q9ULW2 581 aa12.58□□□□□ -0.39
SMG8-202ENST00000543872 MAFBQ9Y5Q3 323 aaPredicted RBP12.58□□□□□ -0.39
SMG8-202ENST00000543872 TANC1Q9C0D5 1861 aa12.58□□□□□ -0.39
SMG8-202ENST00000543872 MICAL3Q7RTP6 2002 aa12.58□□□□□ -0.4
SMG8-202ENST00000543872 COL5A3P25940 1745 aaPredicted RBP12.58□□□□□ -0.4
SMG8-202ENST00000543872 CCDC154A6NI56 674 aa12.58□□□□□ -0.4
SMG8-202ENST00000543872 PGLSO95336 258 aa12.58□□□□□ -0.4
SMG8-202ENST00000543872 SLC4A1P02730 911 aa12.58□□□□□ -0.4
SMG8-202ENST00000543872 ST13P50502 369 aaKnown RBP12.58□□□□□ -0.4
SMG8-202ENST00000543872 STAT5BP51692 787 aa12.58□□□□□ -0.4
SMG8-202ENST00000543872 GNG2P59768 71 aa12.58□□□□□ -0.4
SMG8-202ENST00000543872 SIM2Q14190 667 aaPredicted RBP12.58□□□□□ -0.4
SMG8-202ENST00000543872 LAIR2Q6ISS4 152 aa12.58□□□□□ -0.4
SMG8-202ENST00000543872 LDB1Q86U70 411 aaPredicted RBP12.58□□□□□ -0.4
SMG8-202ENST00000543872 GALNT12Q8IXK2 581 aa12.58□□□□□ -0.4
SMG8-202ENST00000543872 CLYBLQ8N0X4 340 aa12.58□□□□□ -0.4
SMG8-202ENST00000543872 SVOPQ8N4V2 548 aa12.58□□□□□ -0.4
SMG8-202ENST00000543872 TWIST2Q8WVJ9 160 aa12.58□□□□□ -0.4
SMG8-202ENST00000543872 ANKRD49Q8WVL7 239 aa12.58□□□□□ -0.4
SMG8-202ENST00000543872 TP53INP1Q96A56 240 aa12.58□□□□□ -0.4
SMG8-202ENST00000543872 MRIQ9BWK5 157 aa12.58□□□□□ -0.4
SMG8-202ENST00000543872 COL14A1Q05707 1796 aaKnown RBP12.58□□□□□ -0.4
SMG8-202ENST00000543872 M0QYT0 321 aa12.58□□□□□ -0.4
SMG8-202ENST00000543872 UPK1AO00322 258 aa12.58□□□□□ -0.4
SMG8-202ENST00000543872 ANGPTL1O95841 491 aa12.58□□□□□ -0.4
SMG8-202ENST00000543872 CST1P01037 141 aa12.58□□□□□ -0.4
SMG8-202ENST00000543872 PCMT1P22061 227 aa12.58□□□□□ -0.4
SMG8-202ENST00000543872 MTPNP58546 118 aa12.58□□□□□ -0.4
SMG8-202ENST00000543872 TRAF3Q13114 568 aa12.58□□□□□ -0.4
SMG8-202ENST00000543872 CBX2Q14781 532 aaPredicted RBP12.58□□□□□ -0.4
SMG8-202ENST00000543872 ATAD3CQ5T2N8 411 aa12.58□□□□□ -0.4
SMG8-202ENST00000543872 SULT1C3Q6IMI6 304 aa12.58□□□□□ -0.4
SMG8-202ENST00000543872 FAM86B1Q8N7N1 296 aa12.58□□□□□ -0.4
SMG8-202ENST00000543872 BEND7Q8N7W2 519 aaPredicted RBP12.58□□□□□ -0.4
SMG8-202ENST00000543872 OR52K2Q8NGK3 314 aa12.58□□□□□ -0.4
SMG8-202ENST00000543872 PAQR5Q9NXK6 330 aaPredicted RBP12.58□□□□□ -0.4
SMG8-202ENST00000543872 LOC100130705A0A1B0GUX0 176 aa12.57□□□□□ -0.4
SMG8-202ENST00000543872 ZNF487B1APH4 448 aa12.57□□□□□ -0.4
SMG8-202ENST00000543872 AP3D1O14617 1153 aa12.57□□□□□ -0.4
SMG8-202ENST00000543872 CNTN5O94779 1100 aa12.57□□□□□ -0.4
SMG8-202ENST00000543872 ALX3O95076 343 aa12.57□□□□□ -0.4
SMG8-202ENST00000543872 LBPP18428 481 aa12.57□□□□□ -0.4
SMG8-202ENST00000543872 ETV3P41162 512 aa12.57□□□□□ -0.4
SMG8-202ENST00000543872 OR2B6P58173 313 aa12.57□□□□□ -0.4
SMG8-202ENST00000543872 FAM98BQ52LJ0 330 aaKnown RBP12.57□□□□□ -0.4
SMG8-202ENST00000543872 GDPD3Q7L5L3 318 aa12.57□□□□□ -0.4
SMG8-202ENST00000543872 METTL4Q8N3J2 472 aa12.57□□□□□ -0.4
SMG8-202ENST00000543872 CADM2Q8N3J6 435 aa12.57□□□□□ -0.4
SMG8-202ENST00000543872 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.57□□□□□ -0.4
SMG8-202ENST00000543872 PHF10Q8WUB8 498 aaKnown RBP12.57□□□□□ -0.4
SMG8-202ENST00000543872 CCDC126Q96EE4 140 aa12.57□□□□□ -0.4
SMG8-202ENST00000543872 NSUN5Q96P11 429 aaKnown RBP12.57□□□□□ -0.4
SMG8-202ENST00000543872 MBOAT4Q96T53 435 aa12.57□□□□□ -0.4
SMG8-202ENST00000543872 SLIRPQ9GZT3 109 aaKnown RBP12.57□□□□□ -0.4
SMG8-202ENST00000543872 DCSTAMPQ9H295 470 aa12.57□□□□□ -0.4
SMG8-202ENST00000543872 DPEP3Q9H4B8 488 aa12.57□□□□□ -0.4
SMG8-202ENST00000543872 NECTIN3Q9NQS3 549 aa12.57□□□□□ -0.4
SMG8-202ENST00000543872 ZNF639Q9UID6 485 aa12.57□□□□□ -0.4
SMG8-202ENST00000543872 UTS2RQ9UKP6 389 aa12.57□□□□□ -0.4
SMG8-202ENST00000543872 CD4P01730 458 aa12.57□□□□□ -0.4
SMG8-202ENST00000543872 APOA1P02647 267 aa12.57□□□□□ -0.4
SMG8-202ENST00000543872 LTA4HP09960 611 aaKnown RBP12.57□□□□□ -0.4
SMG8-202ENST00000543872 NOS2P35228 1153 aa12.57□□□□□ -0.4
SMG8-202ENST00000543872 UFM1P61960 85 aa12.57□□□□□ -0.4
SMG8-202ENST00000543872 CTAG1AP78358 180 aa12.57□□□□□ -0.4
SMG8-202ENST00000543872 SUZ12Q15022 739 aaKnown RBP12.57□□□□□ -0.4
SMG8-202ENST00000543872 PLA2G4EQ3MJ16 856 aa12.57□□□□□ -0.4
SMG8-202ENST00000543872 GPR158Q5T848 1215 aa12.57□□□□□ -0.4
SMG8-202ENST00000543872 LYPD8Q6UX82 237 aa12.57□□□□□ -0.4
SMG8-202ENST00000543872 BPIFB1Q8TDL5 484 aa12.57□□□□□ -0.4
SMG8-202ENST00000543872 NUDT8Q8WV74 236 aa12.57□□□□□ -0.4
SMG8-202ENST00000543872 AURKBQ96GD4 344 aaPredicted RBP12.57□□□□□ -0.4
SMG8-202ENST00000543872 CDHR1Q96JP9 859 aa12.57□□□□□ -0.4
SMG8-202ENST00000543872 RPAP3Q9H6T3 665 aaPredicted RBP12.57□□□□□ -0.4
SMG8-202ENST00000543872 MINDY3Q9H8M7 445 aa12.57□□□□□ -0.4
SMG8-202ENST00000543872 ZNF70Q9UC06 446 aaPredicted RBP12.57□□□□□ -0.4
SMG8-202ENST00000543872 INTS6Q9UL03 887 aaKnown RBP12.57□□□□□ -0.4
SMG8-202ENST00000543872 SNX10Q9Y5X0 201 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms