RNA–Protein interactions for RNA: ENST00000526044.5

USP48-211, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-211ENST00000526044 LMO2P25791 158 aa4.64□□□□□ -1.67
USP48-211ENST00000526044 CASP14P31944 242 aa4.64□□□□□ -1.67
USP48-211ENST00000526044 CTNNB1P35222 781 aa4.64□□□□□ -1.67
USP48-211ENST00000526044 KRT9P35527 623 aa4.64□□□□□ -1.67
USP48-211ENST00000526044 PPM1AP35813 382 aa4.64□□□□□ -1.67
USP48-211ENST00000526044 PBX3P40426 434 aa4.64□□□□□ -1.67
USP48-211ENST00000526044 LHX1P48742 406 aa4.64□□□□□ -1.67
USP48-211ENST00000526044 AARSP49588 968 aaKnown RBP eCLIP4.64□□□□□ -1.67
USP48-211ENST00000526044 ZBED6P86452 979 aa4.64□□□□□ -1.67
USP48-211ENST00000526044 YWHAHQ04917 246 aaPredicted RBP4.64□□□□□ -1.67
USP48-211ENST00000526044 TBX2Q13207 712 aaPredicted RBP4.64□□□□□ -1.67
USP48-211ENST00000526044 USP41Q3LFD5 358 aa4.64□□□□□ -1.67
USP48-211ENST00000526044 FAXCQ5TGI0 409 aa4.64□□□□□ -1.67
USP48-211ENST00000526044 SFMBT2Q5VUG0 894 aa4.64□□□□□ -1.67
USP48-211ENST00000526044 WSCD1Q658N2 575 aa4.64□□□□□ -1.67
USP48-211ENST00000526044 FAM109BQ6ICB4 259 aaPredicted RBP4.64□□□□□ -1.67
USP48-211ENST00000526044 HIBCHQ6NVY1 386 aaPredicted RBP4.64□□□□□ -1.67
USP48-211ENST00000526044 FUT10Q6P4F1 479 aa4.64□□□□□ -1.67
USP48-211ENST00000526044 PDXDC1Q6P996 788 aa4.64□□□□□ -1.67
USP48-211ENST00000526044 TMEM270Q6UE05 265 aa4.64□□□□□ -1.67
USP48-211ENST00000526044 CRTC1Q6UUV9 634 aa4.64□□□□□ -1.67
USP48-211ENST00000526044 ZNF782Q6ZMW2 699 aaPredicted RBP4.64□□□□□ -1.67
USP48-211ENST00000526044 UNC93AQ86WB7 457 aa4.64□□□□□ -1.67
USP48-211ENST00000526044 ZNF354CQ86Y25 554 aa4.64□□□□□ -1.67
USP48-211ENST00000526044 KRT73Q86Y46 540 aa4.64□□□□□ -1.67
USP48-211ENST00000526044 SRRM1Q8IYB3 904 aaKnown RBP4.64□□□□□ -1.67
USP48-211ENST00000526044 SLC39A11Q8N1S5 342 aa4.64□□□□□ -1.67
USP48-211ENST00000526044 TXLNBQ8N3L3 684 aa4.64□□□□□ -1.67
USP48-211ENST00000526044 FSTL5Q8N475 847 aaPredicted RBP4.64□□□□□ -1.67
USP48-211ENST00000526044 PDCL2Q8N4E4 241 aa4.64□□□□□ -1.67
USP48-211ENST00000526044 OR8K1Q8NGG5 319 aa4.64□□□□□ -1.67
USP48-211ENST00000526044 SPATA18Q8TC71 538 aa4.64□□□□□ -1.67
USP48-211ENST00000526044 ABHD5Q8WTS1 349 aa4.64□□□□□ -1.67
USP48-211ENST00000526044 MPP4Q96JB8 637 aa4.64□□□□□ -1.67
USP48-211ENST00000526044 TNIP3Q96KP6 325 aa4.64□□□□□ -1.67
USP48-211ENST00000526044 CCDC138Q96M89 665 aa4.64□□□□□ -1.67
USP48-211ENST00000526044 RIPOR3Q96MK2 946 aa4.64□□□□□ -1.67
USP48-211ENST00000526044 TGS1Q96RS0 853 aaKnown RBP4.64□□□□□ -1.67
USP48-211ENST00000526044 ELAC2Q9BQ52 826 aaKnown RBP4.64□□□□□ -1.67
USP48-211ENST00000526044 MRPL45Q9BRJ2 306 aaKnown RBP4.64□□□□□ -1.67
USP48-211ENST00000526044 SEMA4CQ9C0C4 833 aa4.64□□□□□ -1.67
USP48-211ENST00000526044 SDCBP2Q9H190 292 aa4.64□□□□□ -1.67
USP48-211ENST00000526044 GANQ9H2C0 597 aa4.64□□□□□ -1.67
USP48-211ENST00000526044 SLC28A3Q9HAS3 691 aa4.64□□□□□ -1.67
USP48-211ENST00000526044 CISHQ9NSE2 258 aa4.64□□□□□ -1.67
USP48-211ENST00000526044 ZNHIT6Q9NWK9 470 aaKnown RBP4.64□□□□□ -1.67
USP48-211ENST00000526044 MARCH5Q9NX47 278 aa4.64□□□□□ -1.67
USP48-211ENST00000526044 DDX43Q9NXZ2 648 aaKnown RBP4.64□□□□□ -1.67
USP48-211ENST00000526044 AIPL1Q9NZN9 384 aa4.64□□□□□ -1.67
USP48-211ENST00000526044 KIAA1257Q9ULG3 409 aa4.64□□□□□ -1.67
USP48-211ENST00000526044 MYO6Q9UM54 1294 aa4.64□□□□□ -1.67
USP48-211ENST00000526044 BARX2Q9UMQ3 279 aaPredicted RBP4.64□□□□□ -1.67
USP48-211ENST00000526044 PHTF1Q9UMS5 762 aa4.64□□□□□ -1.67
USP48-211ENST00000526044 MAN2B2Q9Y2E5 1009 aa4.64□□□□□ -1.67
USP48-211ENST00000526044 SF3B1O75533 1304 aaKnown RBP eCLIP4.64□□□□□ -1.673e-6■■■■□ 20.7
USP48-211ENST00000526044 KIAA1671Q9BY89 1806 aa4.63□□□□□ -1.67
USP48-211ENST00000526044 A0A1W2PPC1 479 aa4.63□□□□□ -1.67
USP48-211ENST00000526044 TCRBV5S1A1TA0A578 114 aa4.63□□□□□ -1.67
USP48-211ENST00000526044 LRRC53A6NM62 1247 aa4.63□□□□□ -1.67
USP48-211ENST00000526044 RASA4BC9J798 803 aa4.63□□□□□ -1.67
USP48-211ENST00000526044 C5orf67F2Z3F1 127 aa4.63□□□□□ -1.67
USP48-211ENST00000526044 H3BNC9 293 aa4.63□□□□□ -1.67
USP48-211ENST00000526044 RASA4O43374 803 aa4.63□□□□□ -1.67
USP48-211ENST00000526044 GCATO75600 419 aa4.63□□□□□ -1.67
USP48-211ENST00000526044 GFPT2O94808 682 aa4.63□□□□□ -1.67
USP48-211ENST00000526044 LATS1O95835 1130 aa4.63□□□□□ -1.67
USP48-211ENST00000526044 AGR2O95994 175 aa4.63□□□□□ -1.67
USP48-211ENST00000526044 GYPCP04921 128 aa4.63□□□□□ -1.67
USP48-211ENST00000526044 PAEPP09466 180 aa4.63□□□□□ -1.67
USP48-211ENST00000526044 TMEM225BP0DP42 221 aa4.63□□□□□ -1.67
USP48-211ENST00000526044 CDK4P11802 303 aa4.63□□□□□ -1.67
USP48-211ENST00000526044 TNFAIP3P21580 790 aa4.63□□□□□ -1.67
USP48-211ENST00000526044 ADRA1DP25100 572 aa4.63□□□□□ -1.67
USP48-211ENST00000526044 CERS1P27544 350 aa4.63□□□□□ -1.67
USP48-211ENST00000526044 TKTP29401 623 aaKnown RBP4.63□□□□□ -1.67
USP48-211ENST00000526044 CASP2P42575 452 aa4.63□□□□□ -1.67
USP48-211ENST00000526044 NDST1P52848 882 aa4.63□□□□□ -1.67
USP48-211ENST00000526044 RAD23BP54727 409 aa4.63□□□□□ -1.67
USP48-211ENST00000526044 ARPP19P56211 112 aa4.63□□□□□ -1.67
USP48-211ENST00000526044 GSDMDP57764 484 aa4.63□□□□□ -1.67
USP48-211ENST00000526044 UBE3AQ05086 875 aa4.63□□□□□ -1.67
USP48-211ENST00000526044 CCDC173Q0VFZ6 552 aa4.63□□□□□ -1.67
USP48-211ENST00000526044 FOXF2Q12947 444 aa4.63□□□□□ -1.67
USP48-211ENST00000526044 GPM6BQ13491 265 aa4.63□□□□□ -1.67
USP48-211ENST00000526044 ASIC2Q16515 512 aa4.63□□□□□ -1.67
USP48-211ENST00000526044 CTXN3Q4LDR2 81 aa4.63□□□□□ -1.67
USP48-211ENST00000526044 IZUMO3Q5VZ72 239 aa4.63□□□□□ -1.67
USP48-211ENST00000526044 MRNIPQ6NTE8 343 aa4.63□□□□□ -1.67
USP48-211ENST00000526044 SCARA5Q6ZMJ2 495 aa4.63□□□□□ -1.67
USP48-211ENST00000526044 KIAA0408Q6ZU52 694 aa4.63□□□□□ -1.67
USP48-211ENST00000526044 CCDC186Q7Z3E2 898 aa4.63□□□□□ -1.67
USP48-211ENST00000526044 IRF2BP2Q7Z5L9 587 aa4.63□□□□□ -1.67
USP48-211ENST00000526044 ACOT1Q86TX2 421 aa4.63□□□□□ -1.67
USP48-211ENST00000526044 TMEM173Q86WV6 379 aaPredicted RBP4.63□□□□□ -1.67
USP48-211ENST00000526044 CNGA4Q8IV77 575 aa4.63□□□□□ -1.67
USP48-211ENST00000526044 FAM71AQ8IYT1 594 aa4.63□□□□□ -1.67
USP48-211ENST00000526044 ADGRF2Q8IZF7 708 aa4.63□□□□□ -1.67
USP48-211ENST00000526044 VPS52Q8N1B4 723 aa4.63□□□□□ -1.67
USP48-211ENST00000526044 CRYBG2Q8N1P7 616 aa4.63□□□□□ -1.67
USP48-211ENST00000526044 PNPLA1Q8N8W4 532 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms