RNA–Protein interactions for RNA: ENST00000523469.5

CPNE3-206, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-206ENST00000523469 HARBI1Q96MB7 349 aa5.91□□□□□ -1.46
CPNE3-206ENST00000523469 NOX4Q9NPH5 578 aa5.91□□□□□ -1.46
CPNE3-206ENST00000523469 EHD2Q9NZN4 543 aa5.91□□□□□ -1.46
CPNE3-206ENST00000523469 TTC7AQ9ULT0 858 aaPredicted RBP5.91□□□□□ -1.46
CPNE3-206ENST00000523469 ITIH6Q6UXX5 1313 aa5.91□□□□□ -1.46
CPNE3-206ENST00000523469 PPIP5K1Q6PFW1 1433 aa5.91□□□□□ -1.46
CPNE3-206ENST00000523469 FAM237BA0A1B0GVD1 139 aa5.9□□□□□ -1.46
CPNE3-206ENST00000523469 SRRM3A6NNA2 597 aaPredicted RBP5.9□□□□□ -1.46
CPNE3-206ENST00000523469 SOCS6O14544 535 aa5.9□□□□□ -1.46
CPNE3-206ENST00000523469 IKBKBO14920 756 aa5.9□□□□□ -1.46
CPNE3-206ENST00000523469 BAIAP3O94812 1187 aa5.9□□□□□ -1.46
CPNE3-206ENST00000523469 NKX2-2O95096 273 aa5.9□□□□□ -1.46
CPNE3-206ENST00000523469 ZBTB11O95625 1053 aaPredicted RBP5.9□□□□□ -1.46
CPNE3-206ENST00000523469 SCGB1D1O95968 90 aa5.9□□□□□ -1.46
CPNE3-206ENST00000523469 TGFB3P10600 412 aa5.9□□□□□ -1.46
CPNE3-206ENST00000523469 HSPA8P11142 646 aaKnown RBP5.9□□□□□ -1.46
CPNE3-206ENST00000523469 IL7RP16871 459 aa5.9□□□□□ -1.46
CPNE3-206ENST00000523469 RRM1P23921 792 aa5.9□□□□□ -1.46
CPNE3-206ENST00000523469 NFKBIAP25963 317 aa5.9□□□□□ -1.46
CPNE3-206ENST00000523469 CEBPZQ03701 1054 aaKnown RBP5.9□□□□□ -1.46
CPNE3-206ENST00000523469 KRTAP1-1Q07627 177 aa5.9□□□□□ -1.46
CPNE3-206ENST00000523469 GRSF1Q12849 480 aaKnown RBP eCLIP5.9□□□□□ -1.46
CPNE3-206ENST00000523469 OASLQ15646 514 aaKnown RBP5.9□□□□□ -1.46
CPNE3-206ENST00000523469 CTF1Q16619 201 aa5.9□□□□□ -1.46
CPNE3-206ENST00000523469 KIF19Q2TAC6 998 aa5.9□□□□□ -1.46
CPNE3-206ENST00000523469 SETMARQ53H47 684 aaPredicted RBP5.9□□□□□ -1.46
CPNE3-206ENST00000523469 FAM122CQ6P4D5 195 aa5.9□□□□□ -1.46
CPNE3-206ENST00000523469 SLC36A4Q6YBV0 504 aa5.9□□□□□ -1.46
CPNE3-206ENST00000523469 FOXRED2Q8IWF2 684 aa5.9□□□□□ -1.46
CPNE3-206ENST00000523469 MAGEC3Q8TD91 643 aa5.9□□□□□ -1.46
CPNE3-206ENST00000523469 RND1Q92730 232 aa5.9□□□□□ -1.46
CPNE3-206ENST00000523469 ARHGEF2Q92974 986 aaKnown RBP5.9□□□□□ -1.46
CPNE3-206ENST00000523469 MUC13Q9H3R2 512 aa5.9□□□□□ -1.46
CPNE3-206ENST00000523469 MMP25Q9NPA2 562 aa5.9□□□□□ -1.46
CPNE3-206ENST00000523469 TINAGQ9UJW2 476 aa5.9□□□□□ -1.46
CPNE3-206ENST00000523469 ADAM18Q9Y3Q7 739 aa5.9□□□□□ -1.46
CPNE3-206ENST00000523469 CNTNAP1P78357 1384 aa5.9□□□□□ -1.47
CPNE3-206ENST00000523469 ROCK1Q13464 1354 aa5.9□□□□□ -1.47
CPNE3-206ENST00000523469 CCDC7Q96M83 1385 aa5.9□□□□□ -1.47
CPNE3-206ENST00000523469 PGPEP1LA6NFU8 196 aa5.89□□□□□ -1.47
CPNE3-206ENST00000523469 BTBD18B2RXH4 712 aa5.89□□□□□ -1.47
CPNE3-206ENST00000523469 USO1O60763 962 aaKnown RBP5.89□□□□□ -1.47
CPNE3-206ENST00000523469 RFPL2O75678 378 aa5.89□□□□□ -1.47
CPNE3-206ENST00000523469 RNASEH2AO75792 299 aaKnown RBP5.89□□□□□ -1.47
CPNE3-206ENST00000523469 PPP1R3DO95685 299 aa5.89□□□□□ -1.47
CPNE3-206ENST00000523469 EIF2S1P05198 315 aaKnown RBP5.89□□□□□ -1.47
CPNE3-206ENST00000523469 LAMP2P13473 410 aa5.89□□□□□ -1.47
CPNE3-206ENST00000523469 CDH2P19022 906 aaPredicted RBP5.89□□□□□ -1.47
CPNE3-206ENST00000523469 RXRGP48443 463 aa5.89□□□□□ -1.47
CPNE3-206ENST00000523469 SEC61BP60468 96 aaKnown RBP5.89□□□□□ -1.47
CPNE3-206ENST00000523469 DCAF7P61962 342 aa5.89□□□□□ -1.47
CPNE3-206ENST00000523469 SETQ01105 290 aaPredicted RBP5.89□□□□□ -1.47
CPNE3-206ENST00000523469 NIPAL4Q0D2K0 466 aa5.89□□□□□ -1.47
CPNE3-206ENST00000523469 SLC39A14Q15043 492 aa5.89□□□□□ -1.47
CPNE3-206ENST00000523469 PAPPA-AS1Q5QFB9 102 aa5.89□□□□□ -1.47
CPNE3-206ENST00000523469 SIGIRRQ6IA17 410 aa5.89□□□□□ -1.47
CPNE3-206ENST00000523469 WDR73Q6P4I2 378 aa5.89□□□□□ -1.47
CPNE3-206ENST00000523469 KCTD18Q6PI47 426 aaPredicted RBP5.89□□□□□ -1.47
CPNE3-206ENST00000523469 NCEH1Q6PIU2 408 aa5.89□□□□□ -1.47
CPNE3-206ENST00000523469 KRBA2Q6ZNG9 492 aa5.89□□□□□ -1.47
CPNE3-206ENST00000523469 C16orf82Q7Z2V1 217 aa5.89□□□□□ -1.47
CPNE3-206ENST00000523469 TBC1D1Q86TI0 1168 aaPredicted RBP5.89□□□□□ -1.47
CPNE3-206ENST00000523469 ARHGAP12Q8IWW6 846 aa5.89□□□□□ -1.47
CPNE3-206ENST00000523469 CCDC13Q8IYE1 715 aa5.89□□□□□ -1.47
CPNE3-206ENST00000523469 NGEFQ8N5V2 710 aa5.89□□□□□ -1.47
CPNE3-206ENST00000523469 ADGRG7Q96K78 797 aa5.89□□□□□ -1.47
CPNE3-206ENST00000523469 CSF3RQ99062 836 aa5.89□□□□□ -1.47
CPNE3-206ENST00000523469 POLR1BQ9H9Y6 1135 aa5.89□□□□□ -1.47
CPNE3-206ENST00000523469 SMARCAL1Q9NZC9 954 aa5.89□□□□□ -1.47
CPNE3-206ENST00000523469 CNOT8Q9UFF9 292 aaKnown RBP5.89□□□□□ -1.47
CPNE3-206ENST00000523469 ZNF580Q9UK33 172 aa5.89□□□□□ -1.47
CPNE3-206ENST00000523469 MAU2Q9Y6X3 613 aa5.89□□□□□ -1.47
CPNE3-206ENST00000523469 UBR3Q6ZT12 1888 aa5.89□□□□□ -1.47
CPNE3-206ENST00000523469 CASP8AP2Q9UKL3 1982 aa5.89□□□□□ -1.47
CPNE3-206ENST00000523469 GOLGA6L9A6NEM1 432 aa5.88□□□□□ -1.47
CPNE3-206ENST00000523469 VCYO14598 125 aa5.88□□□□□ -1.47
CPNE3-206ENST00000523469 TIPRLO75663 272 aa5.88□□□□□ -1.47
CPNE3-206ENST00000523469 SLC25A12O75746 678 aa5.88□□□□□ -1.47
CPNE3-206ENST00000523469 CLDN14O95500 239 aa5.88□□□□□ -1.47
CPNE3-206ENST00000523469 CCKBRP32239 447 aa5.88□□□□□ -1.47
CPNE3-206ENST00000523469 ARL3P36405 182 aa5.88□□□□□ -1.47
CPNE3-206ENST00000523469 HNRNPH2P55795 449 aaKnown RBP5.88□□□□□ -1.47
CPNE3-206ENST00000523469 DLG1Q12959 904 aa5.88□□□□□ -1.47
CPNE3-206ENST00000523469 MAMLD1Q13495 774 aa5.88□□□□□ -1.47
CPNE3-206ENST00000523469 SF3B4Q15427 424 aaKnown RBP eCLIP5.88□□□□□ -1.47
CPNE3-206ENST00000523469 MED22Q15528 200 aa5.88□□□□□ -1.47
CPNE3-206ENST00000523469 CCDC30Q5VVM6 783 aa5.88□□□□□ -1.47
CPNE3-206ENST00000523469 SNX30Q5VWJ9 437 aa5.88□□□□□ -1.47
CPNE3-206ENST00000523469 C9orf57Q5W0N0 161 aa5.88□□□□□ -1.47
CPNE3-206ENST00000523469 CAPRIN2Q6IMN6 1127 aaKnown RBP5.88□□□□□ -1.47
CPNE3-206ENST00000523469 TTI2Q6NXR4 508 aa5.88□□□□□ -1.47
CPNE3-206ENST00000523469 C1orf122Q6ZSJ8 110 aa5.88□□□□□ -1.47
CPNE3-206ENST00000523469 ARMC9Q7Z3E5 817 aa5.88□□□□□ -1.47
CPNE3-206ENST00000523469 CACNA2D4Q7Z3S7 1137 aa5.88□□□□□ -1.47
CPNE3-206ENST00000523469 PDILTQ8N807 584 aa5.88□□□□□ -1.47
CPNE3-206ENST00000523469 LILRB1Q8NHL6 650 aaPredicted RBP5.88□□□□□ -1.47
CPNE3-206ENST00000523469 SGCDQ92629 289 aa5.88□□□□□ -1.47
CPNE3-206ENST00000523469 ARHGEF26Q96DR7 871 aa5.88□□□□□ -1.47
CPNE3-206ENST00000523469 RRNAD1Q96FB5 475 aaKnown RBP5.88□□□□□ -1.47
CPNE3-206ENST00000523469 PPP1R13BQ96KQ4 1090 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms