RNA–Protein interactions for RNA: ENST00000497677.5

CTDSP1-214, Transcript of CTD small phosphatase 1, humanhuman

TSL 2

Gene CTDSP1, Length 998 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-214ENST00000497677 TRAM1L1Q8N609 369 aa15.82■□□□□ 0.12
CTDSP1-214ENST00000497677 PDCD7Q8N8D1 485 aaKnown RBP15.82■□□□□ 0.12
CTDSP1-214ENST00000497677 MAPK15Q8TD08 544 aa15.82■□□□□ 0.12
CTDSP1-214ENST00000497677 ATG4AQ8WYN0 398 aa15.82■□□□□ 0.12
CTDSP1-214ENST00000497677 CAVIN3Q969G5 261 aa15.82■□□□□ 0.12
CTDSP1-214ENST00000497677 TMEM121Q9BTD3 319 aa15.82■□□□□ 0.12
CTDSP1-214ENST00000497677 ZSCAN5AQ9BUG6 496 aa15.82■□□□□ 0.12
CTDSP1-214ENST00000497677 FICDQ9BVA6 458 aa15.82■□□□□ 0.12
CTDSP1-214ENST00000497677 SPATA16Q9BXB7 569 aa15.82■□□□□ 0.12
CTDSP1-214ENST00000497677 GSDMCQ9BYG8 508 aa15.82■□□□□ 0.12
CTDSP1-214ENST00000497677 BPIFA1Q9NP55 256 aa15.82■□□□□ 0.12
CTDSP1-214ENST00000497677 RAD18Q9NS91 495 aa15.82■□□□□ 0.12
CTDSP1-214ENST00000497677 IL17CQ9P0M4 197 aa15.82■□□□□ 0.12
CTDSP1-214ENST00000497677 TAAR2Q9P1P5 351 aa15.82■□□□□ 0.12
CTDSP1-214ENST00000497677 ZNF148Q9UQR1 794 aa15.82■□□□□ 0.12
CTDSP1-214ENST00000497677 IGF2RP11717 2491 aa15.82■□□□□ 0.12
CTDSP1-214ENST00000497677 METTL18O95568 372 aa15.81■□□□□ 0.12
CTDSP1-214ENST00000497677 SLC4A1P02730 911 aa15.81■□□□□ 0.12
CTDSP1-214ENST00000497677 ILF3Q12906 894 aaKnown RBP eCLIP15.81■□□□□ 0.12
CTDSP1-214ENST00000497677 CALCOCO2Q13137 446 aa15.81■□□□□ 0.12
CTDSP1-214ENST00000497677 SNX1Q13596 522 aa15.81■□□□□ 0.12
CTDSP1-214ENST00000497677 HLTFQ14527 1009 aaKnown RBP eCLIP15.81■□□□□ 0.12
CTDSP1-214ENST00000497677 OASLQ15646 514 aaKnown RBP15.81■□□□□ 0.12
CTDSP1-214ENST00000497677 PARP6Q2NL67 630 aa15.81■□□□□ 0.12
CTDSP1-214ENST00000497677 KCTD11Q693B1 232 aa15.81■□□□□ 0.12
CTDSP1-214ENST00000497677 PDPK2PQ6A1A2 396 aa15.81■□□□□ 0.12
CTDSP1-214ENST00000497677 C4orf22Q6V702 233 aa15.81■□□□□ 0.12
CTDSP1-214ENST00000497677 CEP128Q6ZU80 1094 aa15.81■□□□□ 0.12
CTDSP1-214ENST00000497677 MARK2Q7KZI7 788 aaKnown RBP15.81■□□□□ 0.12
CTDSP1-214ENST00000497677 DTX3LQ8TDB6 740 aa15.81■□□□□ 0.12
CTDSP1-214ENST00000497677 AENQ8WTP8 325 aaKnown RBP15.81■□□□□ 0.12
CTDSP1-214ENST00000497677 IFT81Q8WYA0 676 aa15.81■□□□□ 0.12
CTDSP1-214ENST00000497677 RTP4Q96DX8 246 aa15.81■□□□□ 0.12
CTDSP1-214ENST00000497677 PLEKHG4BQ96PX9 1271 aa15.81■□□□□ 0.12
CTDSP1-214ENST00000497677 OR2M4Q96R27 311 aa15.81■□□□□ 0.12
CTDSP1-214ENST00000497677 APOL2Q9BQE5 337 aa15.81■□□□□ 0.12
CTDSP1-214ENST00000497677 CCDC3Q9BQI4 270 aa15.81■□□□□ 0.12
CTDSP1-214ENST00000497677 FSD1LQ9BXM9 530 aa15.81■□□□□ 0.12
CTDSP1-214ENST00000497677 ABCG4Q9H172 646 aa15.81■□□□□ 0.12
CTDSP1-214ENST00000497677 ACBD3Q9H3P7 528 aa15.81■□□□□ 0.12
CTDSP1-214ENST00000497677 DPEP2Q9H4A9 486 aa15.81■□□□□ 0.12
CTDSP1-214ENST00000497677 IL26Q9NPH9 171 aa15.81■□□□□ 0.12
CTDSP1-214ENST00000497677 HACD3Q9P035 362 aa15.81■□□□□ 0.12
CTDSP1-214ENST00000497677 WHRNQ9P202 907 aa15.81■□□□□ 0.12
CTDSP1-214ENST00000497677 ATXN10Q9UBB4 475 aa15.81■□□□□ 0.12
CTDSP1-214ENST00000497677 DKK4Q9UBT3 224 aa15.81■□□□□ 0.12
CTDSP1-214ENST00000497677 ZMIZ1Q9ULJ6 1067 aa15.81■□□□□ 0.12
CTDSP1-214ENST00000497677 AAR2Q9Y312 384 aaKnown RBP15.81■□□□□ 0.12
CTDSP1-214ENST00000497677 GPSM3Q9Y4H4 160 aa15.81■□□□□ 0.12
CTDSP1-214ENST00000497677 PTPRBP23467 1997 aa15.8■□□□□ 0.12
CTDSP1-214ENST00000497677 NTN3O00634 580 aaPredicted RBP15.8■□□□□ 0.12
CTDSP1-214ENST00000497677 ASMTLO95671 621 aa15.8■□□□□ 0.12
CTDSP1-214ENST00000497677 PRPSAP1Q14558 356 aa15.8■□□□□ 0.12
CTDSP1-214ENST00000497677 C14orf28Q4W4Y0 310 aa15.8■□□□□ 0.12
CTDSP1-214ENST00000497677 CERCAMQ5T4B2 595 aa15.8■□□□□ 0.12
CTDSP1-214ENST00000497677 ZNF648Q5T619 568 aaPredicted RBP15.8■□□□□ 0.12
CTDSP1-214ENST00000497677 MDM1Q8TC05 714 aa15.8■□□□□ 0.12
CTDSP1-214ENST00000497677 BLOC1S5Q8TDH9 187 aa15.8■□□□□ 0.12
CTDSP1-214ENST00000497677 GLYATL1Q969I3 302 aa15.8■□□□□ 0.12
CTDSP1-214ENST00000497677 CCDC74AQ96AQ1 378 aa15.8■□□□□ 0.12
CTDSP1-214ENST00000497677 LRRC45Q96CN5 670 aa15.8■□□□□ 0.12
CTDSP1-214ENST00000497677 SNF8Q96H20 258 aa15.8■□□□□ 0.12
CTDSP1-214ENST00000497677 PKNOX2Q96KN3 472 aa15.8■□□□□ 0.12
CTDSP1-214ENST00000497677 RMI1Q9H9A7 625 aa15.8■□□□□ 0.12
CTDSP1-214ENST00000497677 VIPAS39Q9H9C1 493 aa15.8■□□□□ 0.12
CTDSP1-214ENST00000497677 ARNT2Q9HBZ2 717 aa15.8■□□□□ 0.12
CTDSP1-214ENST00000497677 TRIM39Q9HCM9 518 aa15.8■□□□□ 0.12
CTDSP1-214ENST00000497677 MTRF1LQ9UGC7 380 aaKnown RBP15.8■□□□□ 0.12
CTDSP1-214ENST00000497677 ASIC3Q9UHC3 531 aa15.8■□□□□ 0.12
CTDSP1-214ENST00000497677 APPL1Q9UKG1 709 aa15.8■□□□□ 0.12
CTDSP1-214ENST00000497677 PRKAB1Q9Y478 270 aa15.8■□□□□ 0.12
CTDSP1-214ENST00000497677 LRP4O75096 1905 aa15.79■□□□□ 0.12
CTDSP1-214ENST00000497677 A0A1W2PQM1 296 aa15.79■□□□□ 0.12
CTDSP1-214ENST00000497677 B4DGG1 531 aa15.79■□□□□ 0.12
CTDSP1-214ENST00000497677 SMAPO00193 183 aa15.79■□□□□ 0.12
CTDSP1-214ENST00000497677 GAPDHSO14556 408 aaPredicted RBP15.79■□□□□ 0.12
CTDSP1-214ENST00000497677 BUD23O43709 281 aaKnown RBP15.79■□□□□ 0.12
CTDSP1-214ENST00000497677 NUAK1O60285 661 aa15.79■□□□□ 0.12
CTDSP1-214ENST00000497677 USP12O75317 370 aa15.79■□□□□ 0.12
CTDSP1-214ENST00000497677 SLC25A14O95258 325 aaPredicted RBP15.79■□□□□ 0.12
CTDSP1-214ENST00000497677 GLB1P16278 677 aa15.79■□□□□ 0.12
CTDSP1-214ENST00000497677 ZNF8P17098 575 aaPredicted RBP15.79■□□□□ 0.12
CTDSP1-214ENST00000497677 CA5AP35218 305 aa15.79■□□□□ 0.12
CTDSP1-214ENST00000497677 TNNT3P45378 269 aaPredicted RBP15.79■□□□□ 0.12
CTDSP1-214ENST00000497677 KCNJ1P48048 391 aa15.79■□□□□ 0.12
CTDSP1-214ENST00000497677 CARSP49589 748 aaKnown RBP15.79■□□□□ 0.12
CTDSP1-214ENST00000497677 MRPS25P82663 173 aaKnown RBP15.79■□□□□ 0.12
CTDSP1-214ENST00000497677 CYP4F3Q08477 520 aa15.79■□□□□ 0.12
CTDSP1-214ENST00000497677 SPARCL1Q14515 664 aa15.79■□□□□ 0.12
CTDSP1-214ENST00000497677 PTPRCAPQ14761 206 aa15.79■□□□□ 0.12
CTDSP1-214ENST00000497677 RTP5Q14D33 572 aa15.79■□□□□ 0.12
CTDSP1-214ENST00000497677 ATP13A5Q4VNC0 1218 aa15.79■□□□□ 0.12
CTDSP1-214ENST00000497677 KHDC1Q4VXA5 237 aaKnown RBP15.79■□□□□ 0.12
CTDSP1-214ENST00000497677 SLC30A9Q6PML9 568 aa15.79■□□□□ 0.12
CTDSP1-214ENST00000497677 GLT6D1Q7Z4J2 308 aa15.79■□□□□ 0.12
CTDSP1-214ENST00000497677 PCGF5Q86SE9 256 aa15.79■□□□□ 0.12
CTDSP1-214ENST00000497677 ADGRG6Q86SQ4 1221 aa15.79■□□□□ 0.12
CTDSP1-214ENST00000497677 GALNT13Q8IUC8 556 aa15.79■□□□□ 0.12
CTDSP1-214ENST00000497677 NAGSQ8N159 534 aa15.79■□□□□ 0.12
CTDSP1-214ENST00000497677 OR6C4Q8NGE1 309 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms