RNA–Protein interactions for RNA: ENST00000493864.1

TRA2B-216, Transcript of transformer 2 beta homolog, humanhuman

TSL 2

Gene TRA2B, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-216ENST00000493864 ZNF599Q96NL3 588 aa6.62□□□□□ -1.35
TRA2B-216ENST00000493864 FERMT1Q9BQL6 677 aa6.62□□□□□ -1.35
TRA2B-216ENST00000493864 TACO1Q9BSH4 297 aaKnown RBP6.62□□□□□ -1.35
TRA2B-216ENST00000493864 GLOD4Q9HC38 313 aa6.62□□□□□ -1.35
TRA2B-216ENST00000493864 PCDH9Q9HC56 1237 aa6.62□□□□□ -1.35
TRA2B-216ENST00000493864 SPATA6Q9NWH7 488 aaPredicted RBP6.62□□□□□ -1.35
TRA2B-216ENST00000493864 ELOVL2Q9NXB9 296 aa6.62□□□□□ -1.35
TRA2B-216ENST00000493864 GRHL1Q9NZI5 618 aa6.62□□□□□ -1.35
TRA2B-216ENST00000493864 PAK5Q9P286 719 aa6.62□□□□□ -1.35
TRA2B-216ENST00000493864 KLHL8Q9P2G9 620 aaPredicted RBP6.62□□□□□ -1.35
TRA2B-216ENST00000493864 IGSF9Q9P2J2 1179 aa6.62□□□□□ -1.35
TRA2B-216ENST00000493864 UBA2Q9UBT2 640 aaPredicted RBP6.62□□□□□ -1.35
TRA2B-216ENST00000493864 ASIC3Q9UHC3 531 aa6.62□□□□□ -1.35
TRA2B-216ENST00000493864 SLCO3A1Q9UIG8 710 aa6.62□□□□□ -1.35
TRA2B-216ENST00000493864 MCM8Q9UJA3 840 aa6.62□□□□□ -1.35
TRA2B-216ENST00000493864 ANAPC5Q9UJX4 755 aa6.62□□□□□ -1.35
TRA2B-216ENST00000493864 TRHDEQ9UKU6 1024 aa6.62□□□□□ -1.35
TRA2B-216ENST00000493864 APOBEC2Q9Y235 224 aaKnown RBP6.62□□□□□ -1.35
TRA2B-216ENST00000493864 FAM50BQ9Y247 325 aa6.62□□□□□ -1.35
TRA2B-216ENST00000493864 SLC27A6Q9Y2P4 619 aa6.62□□□□□ -1.35
TRA2B-216ENST00000493864 ATP8A1Q9Y2Q0 1164 aa6.62□□□□□ -1.35
TRA2B-216ENST00000493864 UTP11Q9Y3A2 253 aaKnown RBP6.62□□□□□ -1.35
TRA2B-216ENST00000493864 ATG2BQ96BY7 2078 aa6.62□□□□□ -1.35
TRA2B-216ENST00000493864 KMT2EQ8IZD2 1858 aa6.62□□□□□ -1.35
TRA2B-216ENST00000493864 TCRBV7S3A2A0A539 114 aa6.61□□□□□ -1.35
TRA2B-216ENST00000493864 TARSL2A2RTX5 802 aaKnown RBP6.61□□□□□ -1.35
TRA2B-216ENST00000493864 TBC1D3BA6NDS4 549 aa6.61□□□□□ -1.35
TRA2B-216ENST00000493864 DNALI1O14645 258 aaPredicted RBP6.61□□□□□ -1.35
TRA2B-216ENST00000493864 TP73O15350 636 aa6.61□□□□□ -1.35
TRA2B-216ENST00000493864 OPHN1O60890 802 aa6.61□□□□□ -1.35
TRA2B-216ENST00000493864 GJB3O75712 270 aa6.61□□□□□ -1.35
TRA2B-216ENST00000493864 NEBLO76041 1014 aa6.61□□□□□ -1.35
TRA2B-216ENST00000493864 TMCC1O94876 653 aa6.61□□□□□ -1.35
TRA2B-216ENST00000493864 MPIG6BO95866 241 aa6.61□□□□□ -1.35
TRA2B-216ENST00000493864 SRCP12931 536 aa6.61□□□□□ -1.35
TRA2B-216ENST00000493864 PSMB4P28070 264 aa6.61□□□□□ -1.35
TRA2B-216ENST00000493864 MMP13P45452 471 aa6.61□□□□□ -1.35
TRA2B-216ENST00000493864 RGRP47804 291 aa6.61□□□□□ -1.35
TRA2B-216ENST00000493864 DRG2P55039 364 aaKnown RBP6.61□□□□□ -1.35
TRA2B-216ENST00000493864 MAXP61244 160 aa6.61□□□□□ -1.35
TRA2B-216ENST00000493864 TMPRSS15P98073 1019 aa6.61□□□□□ -1.35
TRA2B-216ENST00000493864 ECT2LQ008S8 904 aa6.61□□□□□ -1.35
TRA2B-216ENST00000493864 SLC20A2Q08357 652 aa6.61□□□□□ -1.35
TRA2B-216ENST00000493864 ITKQ08881 620 aa6.61□□□□□ -1.35
TRA2B-216ENST00000493864 NIPAL4Q0D2K0 466 aa6.61□□□□□ -1.35
TRA2B-216ENST00000493864 ELF2Q15723 593 aa6.61□□□□□ -1.35
TRA2B-216ENST00000493864 PARP6Q2NL67 630 aa6.61□□□□□ -1.35
TRA2B-216ENST00000493864 VMACQ2NL98 169 aa6.61□□□□□ -1.35
TRA2B-216ENST00000493864 DGKKQ5KSL6 1271 aa6.61□□□□□ -1.35
TRA2B-216ENST00000493864 SYCP2LQ5T4T6 812 aa6.61□□□□□ -1.35
TRA2B-216ENST00000493864 EMC10Q5UCC4 262 aa6.61□□□□□ -1.35
TRA2B-216ENST00000493864 IZUMO3Q5VZ72 239 aa6.61□□□□□ -1.35
TRA2B-216ENST00000493864 CCNI2Q6ZMN8 369 aaPredicted RBP6.61□□□□□ -1.35
TRA2B-216ENST00000493864 PRPF39Q86UA1 669 aaKnown RBP6.61□□□□□ -1.35
TRA2B-216ENST00000493864 ADHFE1Q8IWW8 467 aa6.61□□□□□ -1.35
TRA2B-216ENST00000493864 IFT20Q8IY31 132 aa6.61□□□□□ -1.35
TRA2B-216ENST00000493864 ZNF557Q8N988 423 aaPredicted RBP6.61□□□□□ -1.35
TRA2B-216ENST00000493864 DCAF4L2Q8NA75 395 aa6.61□□□□□ -1.35
TRA2B-216ENST00000493864 ATP11CQ8NB49 1132 aa6.61□□□□□ -1.35
TRA2B-216ENST00000493864 SPATA22Q8NHS9 363 aa6.61□□□□□ -1.35
TRA2B-216ENST00000493864 WFIKKN2Q8TEU8 576 aa6.61□□□□□ -1.35
TRA2B-216ENST00000493864 NSMCE1Q8WV22 266 aa6.61□□□□□ -1.35
TRA2B-216ENST00000493864 LRRC45Q96CN5 670 aa6.61□□□□□ -1.35
TRA2B-216ENST00000493864 FOXRED1Q96CU9 486 aaPredicted RBP6.61□□□□□ -1.35
TRA2B-216ENST00000493864 OXNAD1Q96HP4 312 aaPredicted RBP6.61□□□□□ -1.35
TRA2B-216ENST00000493864 SCYL1Q96KG9 808 aa6.61□□□□□ -1.35
TRA2B-216ENST00000493864 C16orf92Q96LL3 132 aa6.61□□□□□ -1.35
TRA2B-216ENST00000493864 VAT1Q99536 393 aa6.61□□□□□ -1.35
TRA2B-216ENST00000493864 PARD6BQ9BYG5 372 aa6.61□□□□□ -1.35
TRA2B-216ENST00000493864 CIPCQ9C0C6 399 aa6.61□□□□□ -1.35
TRA2B-216ENST00000493864 RAB17Q9H0T7 212 aa6.61□□□□□ -1.35
TRA2B-216ENST00000493864 NEUROG2Q9H2A3 272 aa6.61□□□□□ -1.35
TRA2B-216ENST00000493864 ZMAT4Q9H898 229 aa6.61□□□□□ -1.35
TRA2B-216ENST00000493864 TRPV5Q9NQA5 729 aa6.61□□□□□ -1.35
TRA2B-216ENST00000493864 GDF3Q9NR23 364 aa6.61□□□□□ -1.35
TRA2B-216ENST00000493864 HEBP1Q9NRV9 189 aa6.61□□□□□ -1.35
TRA2B-216ENST00000493864 GALNT8Q9NY28 637 aa6.61□□□□□ -1.35
TRA2B-216ENST00000493864 LHX3Q9UBR4 397 aa6.61□□□□□ -1.35
TRA2B-216ENST00000493864 RAPGEFL1Q9UHV5 662 aa6.61□□□□□ -1.35
TRA2B-216ENST00000493864 ERVW-1Q9UQF0 538 aa6.61□□□□□ -1.35
TRA2B-216ENST00000493864 MIA3Q5JRA6 1907 aa6.6□□□□□ -1.35
TRA2B-216ENST00000493864 TICRRQ7Z2Z1 1910 aa6.6□□□□□ -1.35
TRA2B-216ENST00000493864 UBA6A0AVT1 1052 aaPredicted RBP6.6□□□□□ -1.35
TRA2B-216ENST00000493864 SHISA7A6NL88 538 aa6.6□□□□□ -1.35
TRA2B-216ENST00000493864 TTC34A8MYJ7 566 aa6.6□□□□□ -1.35
TRA2B-216ENST00000493864 SPECC1L-ADORA2AF8WAN1 911 aa6.6□□□□□ -1.35
TRA2B-216ENST00000493864 INSIG1O15503 277 aa6.6□□□□□ -1.35
TRA2B-216ENST00000493864 TIMM44O43615 452 aa6.6□□□□□ -1.35
TRA2B-216ENST00000493864 ZNF821O75541 412 aaPredicted RBP6.6□□□□□ -1.35
TRA2B-216ENST00000493864 ZNF189O75820 626 aaPredicted RBP6.6□□□□□ -1.35
TRA2B-216ENST00000493864 SEC31AO94979 1220 aaKnown RBP6.6□□□□□ -1.35
TRA2B-216ENST00000493864 KAT7O95251 611 aa6.6□□□□□ -1.35
TRA2B-216ENST00000493864 IL18BPO95998 194 aa6.6□□□□□ -1.35
TRA2B-216ENST00000493864 ATP5BP06576 529 aaKnown RBP6.6□□□□□ -1.35
TRA2B-216ENST00000493864 MMP2P08253 660 aa6.6□□□□□ -1.35
TRA2B-216ENST00000493864 DLDP09622 509 aaKnown RBP6.6□□□□□ -1.35
TRA2B-216ENST00000493864 MYBL2P10244 700 aa6.6□□□□□ -1.35
TRA2B-216ENST00000493864 ACTN2P35609 894 aa6.6□□□□□ -1.35
TRA2B-216ENST00000493864 FDFT1P37268 417 aa6.6□□□□□ -1.35
TRA2B-216ENST00000493864 EIF2DP41214 584 aaKnown RBP6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms