RNA–Protein interactions for RNA: ENST00000489858.1

RAB3GAP1-205, Transcript of RAB3 GTPase activating protein catalytic subunit 1, humanhuman

TSL 2

Gene RAB3GAP1, Length 557 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP1-205ENST00000489858 PTGER3P43115 390 aa9.49□□□□□ -0.89
RAB3GAP1-205ENST00000489858 KCNC1P48547 511 aa9.49□□□□□ -0.89
RAB3GAP1-205ENST00000489858 PSMD8P48556 350 aa9.49□□□□□ -0.89
RAB3GAP1-205ENST00000489858 MRPS22P82650 360 aaKnown RBP9.49□□□□□ -0.89
RAB3GAP1-205ENST00000489858 SMAD3P84022 425 aaKnown RBP9.49□□□□□ -0.89
RAB3GAP1-205ENST00000489858 SRSF11Q05519 484 aaKnown RBP9.49□□□□□ -0.89
RAB3GAP1-205ENST00000489858 TWF1Q12792 350 aa9.49□□□□□ -0.89
RAB3GAP1-205ENST00000489858 RAB33AQ14088 237 aa9.49□□□□□ -0.89
RAB3GAP1-205ENST00000489858 LRP8Q14114 963 aa9.49□□□□□ -0.89
RAB3GAP1-205ENST00000489858 IKBKEQ14164 716 aa9.49□□□□□ -0.89
RAB3GAP1-205ENST00000489858 PFKFB4Q16877 469 aa9.49□□□□□ -0.89
RAB3GAP1-205ENST00000489858 MAP7D1Q3KQU3 841 aa9.49□□□□□ -0.89
RAB3GAP1-205ENST00000489858 PABPC1LQ4VXU2 614 aaKnown RBP9.49□□□□□ -0.89
RAB3GAP1-205ENST00000489858 INO80DQ53TQ3 878 aaPredicted RBP9.49□□□□□ -0.89
RAB3GAP1-205ENST00000489858 SFT2D3Q587I9 215 aa9.49□□□□□ -0.89
RAB3GAP1-205ENST00000489858 ZRANB3Q5FWF4 1079 aa9.49□□□□□ -0.89
RAB3GAP1-205ENST00000489858 LPCAT4Q643R3 524 aa9.49□□□□□ -0.89
RAB3GAP1-205ENST00000489858 PAQR3Q6TCH7 311 aa9.49□□□□□ -0.89
RAB3GAP1-205ENST00000489858 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.49□□□□□ -0.89
RAB3GAP1-205ENST00000489858 DEFB128Q7Z7B8 93 aa9.49□□□□□ -0.89
RAB3GAP1-205ENST00000489858 ITIH5Q86UX2 942 aa9.49□□□□□ -0.89
RAB3GAP1-205ENST00000489858 SPATA24Q86W54 205 aa9.49□□□□□ -0.89
RAB3GAP1-205ENST00000489858 DDIASQ8IXT1 998 aa9.49□□□□□ -0.89
RAB3GAP1-205ENST00000489858 SLC39A11Q8N1S5 342 aa9.49□□□□□ -0.89
RAB3GAP1-205ENST00000489858 MIER2Q8N344 545 aa9.49□□□□□ -0.89
RAB3GAP1-205ENST00000489858 DCAF4L2Q8NA75 395 aa9.49□□□□□ -0.89
RAB3GAP1-205ENST00000489858 ICA1LQ8NDH6 482 aa9.49□□□□□ -0.89
RAB3GAP1-205ENST00000489858 MDGA1Q8NFP4 955 aa9.49□□□□□ -0.89
RAB3GAP1-205ENST00000489858 HMGCLL1Q8TB92 370 aa9.49□□□□□ -0.89
RAB3GAP1-205ENST00000489858 PIP4K2CQ8TBX8 421 aa9.49□□□□□ -0.89
RAB3GAP1-205ENST00000489858 ZNF483Q8TF39 744 aaPredicted RBP9.49□□□□□ -0.89
RAB3GAP1-205ENST00000489858 GATA6Q92908 595 aa9.49□□□□□ -0.89
RAB3GAP1-205ENST00000489858 ROPN1LQ96C74 230 aa9.49□□□□□ -0.89
RAB3GAP1-205ENST00000489858 ASB9Q96DX5 294 aa9.49□□□□□ -0.89
RAB3GAP1-205ENST00000489858 SPDL1Q96EA4 605 aa9.49□□□□□ -0.89
RAB3GAP1-205ENST00000489858 NSMCE3Q96MG7 304 aa9.49□□□□□ -0.89
RAB3GAP1-205ENST00000489858 C1QTNF3Q9BXJ4 246 aa9.49□□□□□ -0.89
RAB3GAP1-205ENST00000489858 EBF3Q9H4W6 596 aa9.49□□□□□ -0.89
RAB3GAP1-205ENST00000489858 SPAG4Q9NPE6 437 aa9.49□□□□□ -0.89
RAB3GAP1-205ENST00000489858 NUDT4Q9NZJ9 180 aa9.49□□□□□ -0.89
RAB3GAP1-205ENST00000489858 CCDC167Q9P0B6 97 aa9.49□□□□□ -0.89
RAB3GAP1-205ENST00000489858 DLGAP2Q9P1A6 1054 aa9.49□□□□□ -0.89
RAB3GAP1-205ENST00000489858 CROTQ9UKG9 612 aa9.49□□□□□ -0.89
RAB3GAP1-205ENST00000489858 PACSIN3Q9UKS6 424 aa9.49□□□□□ -0.89
RAB3GAP1-205ENST00000489858 MAFFQ9ULX9 164 aa9.49□□□□□ -0.89
RAB3GAP1-205ENST00000489858 FAM50BQ9Y247 325 aa9.49□□□□□ -0.89
RAB3GAP1-205ENST00000489858 PKP3Q9Y446 797 aa9.49□□□□□ -0.89
RAB3GAP1-205ENST00000489858 PCDHB1Q9Y5F3 818 aa9.49□□□□□ -0.89
RAB3GAP1-205ENST00000489858 PCDHGA7Q9Y5G6 932 aa9.49□□□□□ -0.89
RAB3GAP1-205ENST00000489858 INSL5Q9Y5Q6 135 aa9.49□□□□□ -0.89
RAB3GAP1-205ENST00000489858 SLC30A1Q9Y6M5 507 aa9.49□□□□□ -0.89
RAB3GAP1-205ENST00000489858 LTBP2Q14767 1821 aa9.49□□□□□ -0.89
RAB3GAP1-205ENST00000489858 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.48□□□□□ -0.89
RAB3GAP1-205ENST00000489858 DPPA5A6NC42 116 aa9.48□□□□□ -0.89
RAB3GAP1-205ENST00000489858 ANKRD66B4E2M5 251 aa9.48□□□□□ -0.89
RAB3GAP1-205ENST00000489858 E5RI56 91 aa9.48□□□□□ -0.89
RAB3GAP1-205ENST00000489858 NR5A2O00482 541 aa9.48□□□□□ -0.89
RAB3GAP1-205ENST00000489858 GIPC1O14908 333 aa9.48□□□□□ -0.89
RAB3GAP1-205ENST00000489858 KLK8O60259 260 aa9.48□□□□□ -0.89
RAB3GAP1-205ENST00000489858 NRP2O60462 931 aa9.48□□□□□ -0.89
RAB3GAP1-205ENST00000489858 SNAP91O60641 907 aa9.48□□□□□ -0.89
RAB3GAP1-205ENST00000489858 SNX2O60749 519 aa9.48□□□□□ -0.89
RAB3GAP1-205ENST00000489858 SIX3O95343 332 aaPredicted RBP9.48□□□□□ -0.89
RAB3GAP1-205ENST00000489858 MLYCDO95822 493 aa9.48□□□□□ -0.89
RAB3GAP1-205ENST00000489858 S100BP04271 92 aaPredicted RBP9.48□□□□□ -0.89
RAB3GAP1-205ENST00000489858 C8BP07358 591 aa9.48□□□□□ -0.89
RAB3GAP1-205ENST00000489858 LYNP07948 512 aa9.48□□□□□ -0.89
RAB3GAP1-205ENST00000489858 UBTFL6P0CB48 400 aaPredicted RBP9.48□□□□□ -0.89
RAB3GAP1-205ENST00000489858 HSPA8P11142 646 aaKnown RBP9.48□□□□□ -0.89
RAB3GAP1-205ENST00000489858 MTHFD2P13995 350 aa9.48□□□□□ -0.89
RAB3GAP1-205ENST00000489858 CD1EP15812 388 aa9.48□□□□□ -0.89
RAB3GAP1-205ENST00000489858 RFC2P35250 354 aa9.48□□□□□ -0.89
RAB3GAP1-205ENST00000489858 IRS1P35568 1242 aa9.48□□□□□ -0.89
RAB3GAP1-205ENST00000489858 DPP6P42658 865 aa9.48□□□□□ -0.89
RAB3GAP1-205ENST00000489858 MAPK8P45983 427 aa9.48□□□□□ -0.89
RAB3GAP1-205ENST00000489858 HSPA13P48723 471 aa9.48□□□□□ -0.89
RAB3GAP1-205ENST00000489858 CLCN4P51793 760 aa9.48□□□□□ -0.89
RAB3GAP1-205ENST00000489858 AQP4P55087 323 aa9.48□□□□□ -0.89
RAB3GAP1-205ENST00000489858 CDH13P55290 713 aa9.48□□□□□ -0.89
RAB3GAP1-205ENST00000489858 RAB15P59190 212 aa9.48□□□□□ -0.89
RAB3GAP1-205ENST00000489858 IL2P60568 153 aa9.48□□□□□ -0.89
RAB3GAP1-205ENST00000489858 CREMQ03060 361 aa9.48□□□□□ -0.89
RAB3GAP1-205ENST00000489858 CLCQ05315 142 aa9.48□□□□□ -0.89
RAB3GAP1-205ENST00000489858 CACNG1Q06432 222 aa9.48□□□□□ -0.89
RAB3GAP1-205ENST00000489858 TRAP1Q12931 704 aaKnown RBP9.48□□□□□ -0.89
RAB3GAP1-205ENST00000489858 MED21Q13503 144 aa9.48□□□□□ -0.89
RAB3GAP1-205ENST00000489858 CDH18Q13634 790 aa9.48□□□□□ -0.89
RAB3GAP1-205ENST00000489858 TSNQ15631 228 aaKnown RBP9.48□□□□□ -0.89
RAB3GAP1-205ENST00000489858 RBBP7Q16576 425 aa9.48□□□□□ -0.89
RAB3GAP1-205ENST00000489858 PPP1R3AQ16821 1122 aa9.48□□□□□ -0.89
RAB3GAP1-205ENST00000489858 UGT3A2Q3SY77 523 aa9.48□□□□□ -0.89
RAB3GAP1-205ENST00000489858 CTSL3PQ5NE16 218 aa9.48□□□□□ -0.89
RAB3GAP1-205ENST00000489858 ARMC12Q5T9G4 340 aa9.48□□□□□ -0.89
RAB3GAP1-205ENST00000489858 PSAPL1Q6NUJ1 521 aa9.48□□□□□ -0.89
RAB3GAP1-205ENST00000489858 RETSATQ6NUM9 610 aa9.48□□□□□ -0.89
RAB3GAP1-205ENST00000489858 LINGO4Q6UY18 593 aa9.48□□□□□ -0.89
RAB3GAP1-205ENST00000489858 RNF111Q6ZNA4 994 aa9.48□□□□□ -0.89
RAB3GAP1-205ENST00000489858 TAS2R42Q7RTR8 314 aa9.48□□□□□ -0.89
RAB3GAP1-205ENST00000489858 LYSMD3Q7Z3D4 306 aa9.48□□□□□ -0.89
RAB3GAP1-205ENST00000489858 ANKRD33Q7Z3H0 272 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms