RNA–Protein interactions for RNA: ENST00000487305.5

TMEM39B-208, Transcript of transmembrane protein 39B, humanhuman

TSL 2

Gene TMEM39B, Length 2,087 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39B-208ENST00000487305 PADI3Q9ULW8 664 aa12.3□□□□□ -0.44
TMEM39B-208ENST00000487305 SIX3O95343 332 aaPredicted RBP12.3□□□□□ -0.44
TMEM39B-208ENST00000487305 CPNE6O95741 557 aa12.3□□□□□ -0.44
TMEM39B-208ENST00000487305 EOMESO95936 686 aa12.3□□□□□ -0.44
TMEM39B-208ENST00000487305 OR1E1P30953 314 aa12.3□□□□□ -0.44
TMEM39B-208ENST00000487305 IL2P60568 153 aa12.3□□□□□ -0.44
TMEM39B-208ENST00000487305 FAM98BQ52LJ0 330 aaKnown RBP12.3□□□□□ -0.44
TMEM39B-208ENST00000487305 ALFQ53S48 1182 aa12.3□□□□□ -0.44
TMEM39B-208ENST00000487305 TTC23Q5W5X9 447 aa12.3□□□□□ -0.44
TMEM39B-208ENST00000487305 ZNF773Q6PK81 442 aa12.3□□□□□ -0.44
TMEM39B-208ENST00000487305 FAM43BQ6ZT52 329 aaPredicted RBP12.3□□□□□ -0.44
TMEM39B-208ENST00000487305 RPS27LQ71UM5 84 aaKnown RBP12.3□□□□□ -0.44
TMEM39B-208ENST00000487305 ZNF554Q86TJ5 538 aa12.3□□□□□ -0.44
TMEM39B-208ENST00000487305 PGBD5Q8N414 524 aa12.3□□□□□ -0.44
TMEM39B-208ENST00000487305 CEP295NLQ96MC4 621 aa12.3□□□□□ -0.44
TMEM39B-208ENST00000487305 PSKH2Q96QS6 385 aa12.3□□□□□ -0.44
TMEM39B-208ENST00000487305 TRIB3Q96RU7 358 aa12.3□□□□□ -0.44
TMEM39B-208ENST00000487305 UGT2B28Q9BY64 529 aa12.3□□□□□ -0.44
TMEM39B-208ENST00000487305 IL1RL2Q9HB29 575 aa12.3□□□□□ -0.44
TMEM39B-208ENST00000487305 FAIMQ9NVQ4 179 aa12.3□□□□□ -0.44
TMEM39B-208ENST00000487305 NUDT4Q9NZJ9 180 aa12.3□□□□□ -0.44
TMEM39B-208ENST00000487305 FLRT1Q9NZU1 646 aa12.3□□□□□ -0.44
TMEM39B-208ENST00000487305 MARCH2Q9P0N8 246 aa12.3□□□□□ -0.44
TMEM39B-208ENST00000487305 EGFL7Q9UHF1 273 aa12.3□□□□□ -0.44
TMEM39B-208ENST00000487305 PCTPQ9UKL6 214 aa12.3□□□□□ -0.44
TMEM39B-208ENST00000487305 BLOC1S6Q9UL45 172 aa12.3□□□□□ -0.44
TMEM39B-208ENST00000487305 OR6C75A6NL08 312 aa12.29□□□□□ -0.44
TMEM39B-208ENST00000487305 H3BMM5 538 aa12.29□□□□□ -0.44
TMEM39B-208ENST00000487305 EI24O14681 340 aa12.29□□□□□ -0.44
TMEM39B-208ENST00000487305 ECI2O75521 394 aa12.29□□□□□ -0.44
TMEM39B-208ENST00000487305 RAP2AP10114 183 aa12.29□□□□□ -0.44
TMEM39B-208ENST00000487305 IMPDH2P12268 514 aa12.29□□□□□ -0.44
TMEM39B-208ENST00000487305 TSPAN8P19075 237 aa12.29□□□□□ -0.44
TMEM39B-208ENST00000487305 ALDH3A2P51648 485 aa12.29□□□□□ -0.44
TMEM39B-208ENST00000487305 MAD2L1Q13257 205 aaPredicted RBP12.29□□□□□ -0.44
TMEM39B-208ENST00000487305 TOP3AQ13472 1001 aaPredicted RBP12.29□□□□□ -0.44
TMEM39B-208ENST00000487305 SLC39A12Q504Y0 691 aa12.29□□□□□ -0.44
TMEM39B-208ENST00000487305 PITRM1Q5JRX3 1037 aa12.29□□□□□ -0.44
TMEM39B-208ENST00000487305 NANOGP8Q6NSW7 305 aa12.29□□□□□ -0.44
TMEM39B-208ENST00000487305 KLHL35Q6PF15 583 aa12.29□□□□□ -0.44
TMEM39B-208ENST00000487305 Q6ZNX1 250 aa12.29□□□□□ -0.44
TMEM39B-208ENST00000487305 LDB1Q86U70 411 aaPredicted RBP12.29□□□□□ -0.44
TMEM39B-208ENST00000487305 ZFAND4Q86XD8 727 aa12.29□□□□□ -0.44
TMEM39B-208ENST00000487305 KCNJ9Q92806 393 aa12.29□□□□□ -0.44
TMEM39B-208ENST00000487305 EXT2Q93063 718 aa12.29□□□□□ -0.44
TMEM39B-208ENST00000487305 SDCCAG3Q96C92 435 aa12.29□□□□□ -0.44
TMEM39B-208ENST00000487305 RPRD1AQ96P16 312 aaPredicted RBP12.29□□□□□ -0.44
TMEM39B-208ENST00000487305 HGH1Q9BTY7 390 aa12.29□□□□□ -0.44
TMEM39B-208ENST00000487305 C1orf50Q9BV19 199 aa12.29□□□□□ -0.44
TMEM39B-208ENST00000487305 NANOGQ9H9S0 305 aa12.29□□□□□ -0.44
TMEM39B-208ENST00000487305 PDFQ9HBH1 243 aa12.29□□□□□ -0.44
TMEM39B-208ENST00000487305 ZFYVE28Q9HCC9 887 aa12.29□□□□□ -0.44
TMEM39B-208ENST00000487305 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.29□□□□□ -0.44
TMEM39B-208ENST00000487305 SLC30A1Q9Y6M5 507 aa12.29□□□□□ -0.44
TMEM39B-208ENST00000487305 TRPM7Q96QT4 1865 aa12.29□□□□□ -0.44
TMEM39B-208ENST00000487305 PLOD2O00469 737 aa12.28□□□□□ -0.44
TMEM39B-208ENST00000487305 CNTN5O94779 1100 aa12.28□□□□□ -0.44
TMEM39B-208ENST00000487305 MT-CO1P00395 513 aa12.28□□□□□ -0.44
TMEM39B-208ENST00000487305 ESR1P03372 595 aa12.28□□□□□ -0.44
TMEM39B-208ENST00000487305 PKMP14618 531 aaKnown RBP12.28□□□□□ -0.44
TMEM39B-208ENST00000487305 YY1P25490 414 aa12.28□□□□□ -0.44
TMEM39B-208ENST00000487305 FOXA1P55317 472 aa12.28□□□□□ -0.44
TMEM39B-208ENST00000487305 CAPRIN1Q14444 709 aaKnown RBP12.28□□□□□ -0.44
TMEM39B-208ENST00000487305 MOGQ16653 247 aa12.28□□□□□ -0.44
TMEM39B-208ENST00000487305 FAM26DQ5JW98 314 aa12.28□□□□□ -0.44
TMEM39B-208ENST00000487305 GNASQ5JWF2 1037 aa12.28□□□□□ -0.44
TMEM39B-208ENST00000487305 BROXQ5VW32 411 aa12.28□□□□□ -0.44
TMEM39B-208ENST00000487305 GDF6Q6KF10 455 aaPredicted RBP12.28□□□□□ -0.44
TMEM39B-208ENST00000487305 PAQR3Q6TCH7 311 aa12.28□□□□□ -0.44
TMEM39B-208ENST00000487305 GLB1LQ6UWU2 654 aa12.28□□□□□ -0.44
TMEM39B-208ENST00000487305 LYSMD3Q7Z3D4 306 aa12.28□□□□□ -0.44
TMEM39B-208ENST00000487305 GPSM1Q86YR5 675 aa12.28□□□□□ -0.44
TMEM39B-208ENST00000487305 RIMKLAQ8IXN7 391 aa12.28□□□□□ -0.44
TMEM39B-208ENST00000487305 RBM12BQ8IXT5 1001 aaKnown RBP12.28□□□□□ -0.44
TMEM39B-208ENST00000487305 SVOPLQ8N434 492 aa12.28□□□□□ -0.44
TMEM39B-208ENST00000487305 SPATA17Q96L03 361 aa12.28□□□□□ -0.44
TMEM39B-208ENST00000487305 BCL7BQ9BQE9 202 aa12.28□□□□□ -0.44
TMEM39B-208ENST00000487305 CHID1Q9BWS9 393 aa12.28□□□□□ -0.44
TMEM39B-208ENST00000487305 OSBPL10Q9BXB5 764 aa12.28□□□□□ -0.44
TMEM39B-208ENST00000487305 GORASP2Q9H8Y8 452 aa12.28□□□□□ -0.44
TMEM39B-208ENST00000487305 HPS4Q9NQG7 708 aa12.28□□□□□ -0.44
TMEM39B-208ENST00000487305 ABI2Q9NYB9 513 aaPredicted RBP12.28□□□□□ -0.44
TMEM39B-208ENST00000487305 TRMT6Q9UJA5 497 aaKnown RBP12.28□□□□□ -0.44
TMEM39B-208ENST00000487305 ARL5AQ9Y689 179 aa12.28□□□□□ -0.44
TMEM39B-208ENST00000487305 A0A1B0GTW7 788 aa12.28□□□□□ -0.44
TMEM39B-208ENST00000487305 OR51F1A6NGY5 319 aa12.28□□□□□ -0.44
TMEM39B-208ENST00000487305 GNAO1P09471 354 aa12.28□□□□□ -0.44
TMEM39B-208ENST00000487305 LPOP22079 712 aaPredicted RBP12.28□□□□□ -0.44
TMEM39B-208ENST00000487305 OXTRP30559 389 aa12.28□□□□□ -0.44
TMEM39B-208ENST00000487305 ETFBP38117 255 aa12.28□□□□□ -0.44
TMEM39B-208ENST00000487305 GABARAPL2P60520 117 aa12.28□□□□□ -0.44
TMEM39B-208ENST00000487305 CHRNB3Q05901 458 aa12.28□□□□□ -0.44
TMEM39B-208ENST00000487305 EFEMP1Q12805 493 aa12.28□□□□□ -0.44
TMEM39B-208ENST00000487305 PCBP2Q15366 365 aaKnown RBP eCLIP12.28□□□□□ -0.44
TMEM39B-208ENST00000487305 C6orf136Q5SQH8 315 aa12.28□□□□□ -0.44
TMEM39B-208ENST00000487305 VARS2Q5ST30 1063 aaKnown RBP12.28□□□□□ -0.44
TMEM39B-208ENST00000487305 ISLR2Q6UXK2 745 aa12.28□□□□□ -0.44
TMEM39B-208ENST00000487305 ZNF598Q86UK7 904 aaKnown RBP12.28□□□□□ -0.44
TMEM39B-208ENST00000487305 C2orf69Q8N8R5 385 aa12.28□□□□□ -0.44
TMEM39B-208ENST00000487305 SMYD1Q8NB12 490 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms