RNA–Protein interactions for RNA: ENST00000479100.1

COL16A1-211, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 740 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-211ENST00000479100 PTCD2Q8WV60 388 aaKnown RBP15.06■□□□□ 0
COL16A1-211ENST00000479100 TTC25Q96NG3 672 aa15.06■□□□□ 0
COL16A1-211ENST00000479100 VPS35Q96QK1 796 aa15.06■□□□□ 0
COL16A1-211ENST00000479100 C19orf43Q9BQ61 176 aa15.06■□□□□ 0
COL16A1-211ENST00000479100 TRIM39Q9HCM9 518 aa15.06■□□□□ 0
COL16A1-211ENST00000479100 SUFUQ9UMX1 484 aa15.06■□□□□ 0
COL16A1-211ENST00000479100 SLC17A4Q9Y2C5 497 aa15.06■□□□□ 0
COL16A1-211ENST00000479100 PRKAB1Q9Y478 270 aa15.06■□□□□ 0
COL16A1-211ENST00000479100 TP53BP1Q12888 1972 aaPredicted RBP15.05■□□□□ 0
COL16A1-211ENST00000479100 SCN8AQ9UQD0 1980 aa15.05■□□□□ 0
COL16A1-211ENST00000479100 PCNX2A6NKB5 2137 aa15.05■□□□□ 0
COL16A1-211ENST00000479100 C1QTNF9BB2RNN3 333 aa15.05■□□□□ -0
COL16A1-211ENST00000479100 SMAPO00193 183 aa15.05■□□□□ -0
COL16A1-211ENST00000479100 NDC80O14777 642 aa15.05■□□□□ -0
COL16A1-211ENST00000479100 AQP9O43315 295 aa15.05■□□□□ -0
COL16A1-211ENST00000479100 SH3BP5O60239 455 aa15.05■□□□□ -0
COL16A1-211ENST00000479100 PCDHGA12O60330 932 aa15.05■□□□□ -0
COL16A1-211ENST00000479100 FUCA1P04066 466 aa15.05■□□□□ -0
COL16A1-211ENST00000479100 PROS1P07225 676 aa15.05■□□□□ -0
COL16A1-211ENST00000479100 IVLP07476 585 aa15.05■□□□□ -0
COL16A1-211ENST00000479100 C1QTNF9P0C862 333 aa15.05■□□□□ -0
COL16A1-211ENST00000479100 PRSS56P0CW18 603 aa15.05■□□□□ -0
COL16A1-211ENST00000479100 SPINK2P20155 84 aa15.05■□□□□ -0
COL16A1-211ENST00000479100 CDKN1CP49918 316 aaPredicted RBP15.05■□□□□ -0
COL16A1-211ENST00000479100 NFATC2Q13469 925 aa15.05■□□□□ -0
COL16A1-211ENST00000479100 GTF2H3Q13889 308 aa15.05■□□□□ -0
COL16A1-211ENST00000479100 SMAD1Q15797 465 aaKnown RBP15.05■□□□□ -0
COL16A1-211ENST00000479100 INAVAQ3KP66 663 aa15.05■□□□□ -0
COL16A1-211ENST00000479100 DNAJC21Q5F1R6 531 aaKnown RBP15.05■□□□□ -0
COL16A1-211ENST00000479100 LDLRAP1Q5SW96 308 aa15.05■□□□□ -0
COL16A1-211ENST00000479100 FNBP1LQ5T0N5 605 aa15.05■□□□□ -0
COL16A1-211ENST00000479100 GPRC6AQ5T6X5 926 aa15.05■□□□□ -0
COL16A1-211ENST00000479100 DUPD1Q68J44 220 aa15.05■□□□□ -0
COL16A1-211ENST00000479100 SNX20Q7Z614 316 aa15.05■□□□□ -0
COL16A1-211ENST00000479100 ADGRG6Q86SQ4 1221 aa15.05■□□□□ -0
COL16A1-211ENST00000479100 GALNT13Q8IUC8 556 aa15.05■□□□□ -0
COL16A1-211ENST00000479100 NAXDQ8IW45 347 aa15.05■□□□□ -0
COL16A1-211ENST00000479100 MMGT1Q8N4V1 131 aa15.05■□□□□ -0
COL16A1-211ENST00000479100 EID2Q8N6I1 236 aa15.05■□□□□ -0
COL16A1-211ENST00000479100 OR13J1Q8NGT2 312 aa15.05■□□□□ -0
COL16A1-211ENST00000479100 ULK4Q96C45 1275 aa15.05■□□□□ -0
COL16A1-211ENST00000479100 PWWP2AQ96N64 755 aa15.05■□□□□ -0
COL16A1-211ENST00000479100 LRRC61Q9BV99 259 aa15.05■□□□□ -0
COL16A1-211ENST00000479100 KIFC1Q9BW19 673 aa15.05■□□□□ -0
COL16A1-211ENST00000479100 SLC32A1Q9H598 525 aa15.05■□□□□ -0
COL16A1-211ENST00000479100 VPS18Q9P253 973 aa15.05■□□□□ -0
COL16A1-211ENST00000479100 ATXN10Q9UBB4 475 aa15.05■□□□□ -0
COL16A1-211ENST00000479100 RIMKLBQ9ULI2 386 aa15.05■□□□□ -0
COL16A1-211ENST00000479100 SOX13Q9UN79 622 aa15.05■□□□□ -0
COL16A1-211ENST00000479100 DOLKQ9UPQ8 538 aa15.05■□□□□ -0
COL16A1-211ENST00000479100 BTBD3Q9Y2F9 522 aa15.05■□□□□ -0
COL16A1-211ENST00000479100 PCDHGB2Q9Y5G2 931 aa15.05■□□□□ -0
COL16A1-211ENST00000479100 DGKBQ9Y6T7 804 aa15.05■□□□□ -0
COL16A1-211ENST00000479100 SPAARA0A1B0GVQ0 90 aa15.04■□□□□ -0
COL16A1-211ENST00000479100 MAGEB16A2A368 324 aa15.04■□□□□ -0
COL16A1-211ENST00000479100 NEMP2A6NFY4 417 aa15.04■□□□□ -0
COL16A1-211ENST00000479100 H7C0S8 307 aa15.04■□□□□ -0
COL16A1-211ENST00000479100 BANF1O75531 89 aa15.04■□□□□ -0
COL16A1-211ENST00000479100 CDK14O94921 469 aa15.04■□□□□ -0
COL16A1-211ENST00000479100 GOT2P00505 430 aaKnown RBP15.04■□□□□ -0
COL16A1-211ENST00000479100 CELA2BP08218 269 aaPredicted RBP15.04■□□□□ -0
COL16A1-211ENST00000479100 ZNF8P17098 575 aaPredicted RBP15.04■□□□□ -0
COL16A1-211ENST00000479100 MSH3P20585 1137 aa15.04■□□□□ -0
COL16A1-211ENST00000479100 GRK6P43250 576 aa15.04■□□□□ -0
COL16A1-211ENST00000479100 ARL4CP56559 192 aa15.04■□□□□ -0
COL16A1-211ENST00000479100 CACNG1Q06432 222 aa15.04■□□□□ -0
COL16A1-211ENST00000479100 DHX9Q08211 1270 aaKnown RBP15.04■□□□□ -0
COL16A1-211ENST00000479100 TMEM115Q12893 351 aaPredicted RBP15.04■□□□□ -0
COL16A1-211ENST00000479100 ELOCQ15369 112 aa15.04■□□□□ -0
COL16A1-211ENST00000479100 KHDC1Q4VXA5 237 aaKnown RBP15.04■□□□□ -0
COL16A1-211ENST00000479100 HP1BP3Q5SSJ5 553 aaPredicted RBP15.04■□□□□ -0
COL16A1-211ENST00000479100 AFTPHQ6ULP2 937 aa15.04■□□□□ -0
COL16A1-211ENST00000479100 TAF8Q7Z7C8 310 aa15.04■□□□□ -0
COL16A1-211ENST00000479100 SERPINA9Q86WD7 417 aa15.04■□□□□ -0
COL16A1-211ENST00000479100 PDIK1LQ8N165 341 aa15.04■□□□□ -0
COL16A1-211ENST00000479100 SLC25A45Q8N413 288 aa15.04■□□□□ -0
COL16A1-211ENST00000479100 FSTL5Q8N475 847 aaPredicted RBP15.04■□□□□ -0
COL16A1-211ENST00000479100 OTUD6BQ8N6M0 293 aa15.04■□□□□ -0
COL16A1-211ENST00000479100 RHBDD1Q8TEB9 315 aa15.04■□□□□ -0
COL16A1-211ENST00000479100 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.04■□□□□ -0
COL16A1-211ENST00000479100 ZNF669Q96BR6 464 aaPredicted RBP15.04■□□□□ -0
COL16A1-211ENST00000479100 MFSD3Q96ES6 412 aa15.04■□□□□ -0
COL16A1-211ENST00000479100 STAMBPL1Q96FJ0 436 aa15.04■□□□□ -0
COL16A1-211ENST00000479100 DCUN1D1Q96GG9 259 aa15.04■□□□□ -0
COL16A1-211ENST00000479100 SIGLEC10Q96LC7 697 aa15.04■□□□□ -0
COL16A1-211ENST00000479100 CAMK1GQ96NX5 476 aa15.04■□□□□ -0
COL16A1-211ENST00000479100 OR2M4Q96R27 311 aa15.04■□□□□ -0
COL16A1-211ENST00000479100 TRIM56Q9BRZ2 755 aaKnown RBP15.04■□□□□ -0
COL16A1-211ENST00000479100 ZCCHC2Q9C0B9 1178 aaKnown RBP15.04■□□□□ -0
COL16A1-211ENST00000479100 TMEM168Q9H0V1 697 aa15.04■□□□□ -0
COL16A1-211ENST00000479100 MRM3Q9HC36 420 aaKnown RBP15.04■□□□□ -0
COL16A1-211ENST00000479100 WHRNQ9P202 907 aa15.04■□□□□ -0
COL16A1-211ENST00000479100 TDRD6O60522 2096 aaKnown RBP15.04■□□□□ -0
COL16A1-211ENST00000479100 CABIN1Q9Y6J0 2220 aa15.03■□□□□ -0
COL16A1-211ENST00000479100 FLRT2O43155 660 aa15.03■□□□□ -0
COL16A1-211ENST00000479100 VEGFDO43915 354 aa15.03■□□□□ -0
COL16A1-211ENST00000479100 NUAK1O60285 661 aa15.03■□□□□ -0
COL16A1-211ENST00000479100 ANXA6P08133 673 aa15.03■□□□□ -0
COL16A1-211ENST00000479100 ALPPL2P10696 532 aa15.03■□□□□ -0
COL16A1-211ENST00000479100 PSMA3P25788 255 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms